RNA–Protein interactions for RNA: ENST00000265375.13

CCNY-201, Transcript of cyclin Y, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCNY, Length 4,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-201ENST00000265375 CCNB3Q8WWL7 1395 aa20.61■□□□□ 0.89
CCNY-201ENST00000265375 CHGAP10645 457 aaKnown RBP20.58■□□□□ 0.88
CCNY-201ENST00000265375 RUSC2Q8N2Y8 1516 aa20.57■□□□□ 0.88
CCNY-201ENST00000265375 EIF4G2P78344 907 aaKnown RBP eCLIP20.56■□□□□ 0.882e-6■■■■□ 23.6
CCNY-201ENST00000265375 SALL2Q9Y467 1007 aaPredicted RBP20.56■□□□□ 0.88
CCNY-201ENST00000265375 PLEKHD1A6NEE1 506 aa20.54■□□□□ 0.88
CCNY-201ENST00000265375 MRS2Q9HD23 443 aa20.54■□□□□ 0.88
CCNY-201ENST00000265375 ATAD2BQ9ULI0 1458 aa20.54■□□□□ 0.88
CCNY-201ENST00000265375 SMARCA4P51532 1647 aa20.54■□□□□ 0.88
CCNY-201ENST00000265375 RTL5Q5HYW3 569 aaPredicted RBP20.52■□□□□ 0.88
CCNY-201ENST00000265375 KCNH8Q96L42 1107 aa20.52■□□□□ 0.88
CCNY-201ENST00000265375 CFDP1Q9UEE9 299 aaPredicted RBP20.52■□□□□ 0.88
CCNY-201ENST00000265375 FHAD1B1AJZ9 1412 aa20.51■□□□□ 0.87
CCNY-201ENST00000265375 TMC1Q8TDI8 760 aa20.49■□□□□ 0.87
CCNY-201ENST00000265375 NPM1P06748 294 aaKnown RBP eCLIP20.48■□□□□ 0.87
CCNY-201ENST00000265375 RAPGEF2Q9Y4G8 1499 aa20.47■□□□□ 0.87
CCNY-201ENST00000265375 TDRD9Q8NDG6 1382 aaKnown RBP20.45■□□□□ 0.86
CCNY-201ENST00000265375 IRX6P78412 446 aaPredicted RBP20.45■□□□□ 0.86
CCNY-201ENST00000265375 CANXP27824 592 aaKnown RBP20.44■□□□□ 0.86
CCNY-201ENST00000265375 RGL3Q3MIN7 710 aa20.42■□□□□ 0.86
CCNY-201ENST00000265375 EIF4G1Q04637 1599 aaKnown RBP20.39■□□□□ 0.85
CCNY-201ENST00000265375 CADPSQ9ULU8 1353 aa20.39■□□□□ 0.85
CCNY-201ENST00000265375 SENP3-EIF4A1A0A087X0R7 540 aa20.38■□□□□ 0.85
CCNY-201ENST00000265375 BCL11AQ9H165 835 aa20.35■□□□□ 0.85
CCNY-201ENST00000265375 ERCC6Q03468 1493 aa20.35■□□□□ 0.85
CCNY-201ENST00000265375 SETD5Q9C0A6 1442 aa20.34■□□□□ 0.85
CCNY-201ENST00000265375 NPM2Q86SE8 214 aaKnown RBP20.31■□□□□ 0.84
CCNY-201ENST00000265375 STAG3Q9UJ98 1225 aa20.31■□□□□ 0.84
CCNY-201ENST00000265375 RAB3GAP2Q9H2M9 1393 aa20.31■□□□□ 0.84
CCNY-201ENST00000265375 NEFMP07197 916 aa20.29■□□□□ 0.84
CCNY-201ENST00000265375 CCDC136Q96JN2 1154 aa20.27■□□□□ 0.84
CCNY-201ENST00000265375 ARHGAP35Q9NRY4 1499 aa20.27■□□□□ 0.84
CCNY-201ENST00000265375 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
CCNY-201ENST00000265375 ANP32AP39687 249 aaKnown RBP20.27■□□□□ 0.83
CCNY-201ENST00000265375 ESF1Q9H501 851 aaKnown RBP20.26■□□□□ 0.83
CCNY-201ENST00000265375 PDS5BQ9NTI5 1447 aa20.26■□□□□ 0.83
CCNY-201ENST00000265375 FHOD3Q2V2M9 1422 aa20.25■□□□□ 0.83
CCNY-201ENST00000265375 CARD11Q9BXL7 1154 aa20.25■□□□□ 0.83
CCNY-201ENST00000265375 FOXD1Q16676 465 aa20.24■□□□□ 0.83
CCNY-201ENST00000265375 SLC24A1O60721 1099 aa20.22■□□□□ 0.83
CCNY-201ENST00000265375 PLPPR3Q6T4P5 718 aa20.22■□□□□ 0.83
CCNY-201ENST00000265375 TIMELESSQ9UNS1 1208 aa20.22■□□□□ 0.83
CCNY-201ENST00000265375 WDR43Q15061 677 aaKnown RBP eCLIP20.21■□□□□ 0.83
CCNY-201ENST00000265375 SUPT16HQ9Y5B9 1047 aaKnown RBP20.2■□□□□ 0.82
CCNY-201ENST00000265375 FMN1Q68DA7 1419 aa20.19■□□□□ 0.82
CCNY-201ENST00000265375 ZBTB47Q9UFB7 747 aaPredicted RBP20.19■□□□□ 0.82
CCNY-201ENST00000265375 HSPA5P11021 654 aaKnown RBP20.11■□□□□ 0.81
CCNY-201ENST00000265375 DCAF11Q8TEB1 546 aa20.11■□□□□ 0.81
CCNY-201ENST00000265375 FANCD2Q9BXW9 1451 aa20.1■□□□□ 0.81
CCNY-201ENST00000265375 DHX57Q6P158 1386 aaKnown RBP20.1■□□□□ 0.81
CCNY-201ENST00000265375 PPP1R15AO75807 674 aaPredicted RBP20.1■□□□□ 0.81
CCNY-201ENST00000265375 IGF1RP08069 1367 aa20.09■□□□□ 0.81
CCNY-201ENST00000265375 MPHOSPH9Q99550 1183 aa20.08■□□□□ 0.81
CCNY-201ENST00000265375 PKD2Q13563 968 aa20.08■□□□□ 0.81
CCNY-201ENST00000265375 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.02■□□□□ 0.8
CCNY-201ENST00000265375 KNSTRNQ9Y448 316 aa20.02■□□□□ 0.8
CCNY-201ENST00000265375 FGD5Q6ZNL6 1462 aa20.01■□□□□ 0.79
CCNY-201ENST00000265375 NCAPD3P42695 1498 aa20.01■□□□□ 0.79
CCNY-201ENST00000265375 CARMIL2Q6F5E8 1435 aa19.99■□□□□ 0.79
CCNY-201ENST00000265375 CCER2I3L3R5 266 aa19.99■□□□□ 0.79
CCNY-201ENST00000265375 L3MBTL2Q969R5 705 aa19.98■□□□□ 0.79
CCNY-201ENST00000265375 RAD54L2Q9Y4B4 1467 aa19.98■□□□□ 0.79
CCNY-201ENST00000265375 CC2D1BQ5T0F9 858 aaKnown RBP19.97■□□□□ 0.79
CCNY-201ENST00000265375 CDCA8Q53HL2 280 aa19.95■□□□□ 0.78
CCNY-201ENST00000265375 KIF21BO75037 1637 aa19.94■□□□□ 0.78
CCNY-201ENST00000265375 NUP155O75694 1391 aa19.94■□□□□ 0.78
CCNY-201ENST00000265375 SYNJ1O43426 1573 aa19.94■□□□□ 0.78
CCNY-201ENST00000265375 JPH4Q96JJ6 628 aa19.93■□□□□ 0.78
CCNY-201ENST00000265375 NBR1Q14596 966 aa19.93■□□□□ 0.78
CCNY-201ENST00000265375 HNRNPMP52272 730 aaKnown RBP eCLIP19.9■□□□□ 0.787e-7■■■■□ 22.6
CCNY-201ENST00000265375 B4GALNT3Q6L9W6 998 aa19.88■□□□□ 0.77
CCNY-201ENST00000265375 NEUROD2Q15784 382 aa19.88■□□□□ 0.77
CCNY-201ENST00000265375 ANKRD30AQ9BXX3 1397 aa19.87■□□□□ 0.77
CCNY-201ENST00000265375 PPP4R2Q9NY27 417 aa19.87■□□□□ 0.77
CCNY-201ENST00000265375 TNNT2P45379 298 aaPredicted RBP19.87■□□□□ 0.77
CCNY-201ENST00000265375 UPF2Q9HAU5 1272 aaKnown RBP19.86■□□□□ 0.77
CCNY-201ENST00000265375 TMF1P82094 1093 aa19.86■□□□□ 0.77
CCNY-201ENST00000265375 ARAP1Q96P48 1450 aa19.84■□□□□ 0.77
CCNY-201ENST00000265375 PHLDB1Q86UU1 1377 aa19.84■□□□□ 0.77
CCNY-201ENST00000265375 CCDC18Q5T9S5 1454 aa19.84■□□□□ 0.77
CCNY-201ENST00000265375 GAPVD1Q14C86 1478 aa19.83■□□□□ 0.77
CCNY-201ENST00000265375 CFTRP13569 1480 aa19.81■□□□□ 0.76
CCNY-201ENST00000265375 PPM1GO15355 546 aaPredicted RBP19.81■□□□□ 0.76
CCNY-201ENST00000265375 EFCAB2Q5VUJ9 269 aa19.8■□□□□ 0.76
CCNY-201ENST00000265375 CFAP53Q96M91 514 aa19.8■□□□□ 0.76
CCNY-201ENST00000265375 GGT6Q6P531 493 aa19.79■□□□□ 0.76
CCNY-201ENST00000265375 HSP90AA1P07900 732 aaKnown RBP19.78■□□□□ 0.76
CCNY-201ENST00000265375 PLEKHG5O94827 1062 aa19.75■□□□□ 0.75
CCNY-201ENST00000265375 ROCK2O75116 1388 aaKnown RBP19.75■□□□□ 0.75
CCNY-201ENST00000265375 KANK1Q14678 1352 aa19.75■□□□□ 0.75
CCNY-201ENST00000265375 ARID4BQ4LE39 1312 aaPredicted RBP19.75■□□□□ 0.75
CCNY-201ENST00000265375 POGKQ9P215 609 aa19.75■□□□□ 0.75
CCNY-201ENST00000265375 PRXQ9BXM0 1461 aa19.74■□□□□ 0.75
CCNY-201ENST00000265375 LRRC9Q6ZRR7 1453 aa19.73■□□□□ 0.75
CCNY-201ENST00000265375 ZNF644Q9H582 1327 aaPredicted RBP19.73■□□□□ 0.75
CCNY-201ENST00000265375 SAFB2Q14151 953 aaKnown RBP eCLIP19.72■□□□□ 0.75
CCNY-201ENST00000265375 AQRO60306 1485 aaKnown RBP eCLIP19.72■□□□□ 0.758e-7■■■■■ 33.9
CCNY-201ENST00000265375 FGD6Q6ZV73 1430 aa19.72■□□□□ 0.75
CCNY-201ENST00000265375 NESP48681 1621 aa19.71■□□□□ 0.75
CCNY-201ENST00000265375 ERICH3Q5RHP9 1530 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms