RNA–Protein interactions for RNA: ENST00000264254.10

PDCL3-201, Transcript of phosducin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCL3, Length 1,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3-201ENST00000264254 KIF21BO75037 1637 aa28.15■■■□□ 2.1
PDCL3-201ENST00000264254 JPH4Q96JJ6 628 aa28.11■■■□□ 2.09
PDCL3-201ENST00000264254 GOLGA3Q08378 1498 aa28.09■■■□□ 2.09
PDCL3-201ENST00000264254 UBTFP17480 764 aaKnown RBP28.02■■■□□ 2.08
PDCL3-201ENST00000264254 IQGAP2Q13576 1575 aa28.02■■■□□ 2.08
PDCL3-201ENST00000264254 SHROOM2Q13796 1616 aa27.98■■■□□ 2.07
PDCL3-201ENST00000264254 ARHGEF11O15085 1522 aa27.97■■■□□ 2.07
PDCL3-201ENST00000264254 PRG4Q92954 1404 aaPredicted RBP27.96■■■□□ 2.07
PDCL3-201ENST00000264254 CARMIL2Q6F5E8 1435 aa27.93■■■□□ 2.06
PDCL3-201ENST00000264254 EHMT2Q96KQ7 1210 aa27.92■■■□□ 2.06
PDCL3-201ENST00000264254 UGGT2Q9NYU1 1516 aa27.91■■■□□ 2.06
PDCL3-201ENST00000264254 CTTNBP2Q8WZ74 1663 aa27.91■■■□□ 2.06
PDCL3-201ENST00000264254 RIMBP3CA6NJZ7 1639 aa27.85■■■□□ 2.05
PDCL3-201ENST00000264254 RIMBP3BA6NNM3 1639 aa27.85■■■□□ 2.05
PDCL3-201ENST00000264254 RIMBP3Q9UFD9 1639 aa27.85■■■□□ 2.05
PDCL3-201ENST00000264254 TNIKQ9UKE5 1360 aa27.84■■■□□ 2.05
PDCL3-201ENST00000264254 DISP1Q96F81 1524 aa27.79■■■□□ 2.04
PDCL3-201ENST00000264254 ERCC6L2Q5T890 1561 aa27.77■■■□□ 2.04
PDCL3-201ENST00000264254 ARAP1Q96P48 1450 aa27.76■■■□□ 2.03
PDCL3-201ENST00000264254 CYB5RLQ6IPT4 315 aa27.75■■■□□ 2.03
PDCL3-201ENST00000264254 PTPRGP23470 1445 aa27.73■■■□□ 2.03
PDCL3-201ENST00000264254 KIAA0556O60303 1618 aa27.72■■■□□ 2.03
PDCL3-201ENST00000264254 LOC105371045A0A1W2PR82 267 aa27.71■■■□□ 2.03
PDCL3-201ENST00000264254 RANGAP1P46060 587 aaPredicted RBP27.71■■■□□ 2.03
PDCL3-201ENST00000264254 EFCAB5A4FU69 1503 aa27.71■■■□□ 2.03
PDCL3-201ENST00000264254 SAMD9Q5K651 1589 aa27.66■■■□□ 2.02
PDCL3-201ENST00000264254 P3H3Q8IVL6 736 aa27.64■■■□□ 2.01
PDCL3-201ENST00000264254 CLIP1P30622 1438 aa27.59■■■□□ 2.01
PDCL3-201ENST00000264254 TTBK1Q5TCY1 1321 aaPredicted RBP27.58■■■□□ 2.01
PDCL3-201ENST00000264254 ARHGAP35Q9NRY4 1499 aa27.57■■■□□ 2
PDCL3-201ENST00000264254 FHOD3Q2V2M9 1422 aa27.55■■■□□ 2
PDCL3-201ENST00000264254 CEP162Q5TB80 1403 aa27.54■■■□□ 2
PDCL3-201ENST00000264254 UACAQ9BZF9 1416 aa27.54■■■□□ 2
PDCL3-201ENST00000264254 FMN1Q68DA7 1419 aa27.51■■□□□ 1.99
PDCL3-201ENST00000264254 UHRF1BP1LA0JNW5 1464 aa27.5■■□□□ 1.99
PDCL3-201ENST00000264254 NPM1P06748 294 aaKnown RBP eCLIP27.49■■□□□ 1.99
PDCL3-201ENST00000264254 ABCC2Q92887 1545 aa27.43■■□□□ 1.98
PDCL3-201ENST00000264254 PLB1Q6P1J6 1458 aa27.43■■□□□ 1.98
PDCL3-201ENST00000264254 ABCA8O94911 1581 aa27.4■■□□□ 1.98
PDCL3-201ENST00000264254 ADCY10Q96PN6 1610 aa27.38■■□□□ 1.97
PDCL3-201ENST00000264254 KDM5BQ9UGL1 1544 aa27.33■■□□□ 1.97
PDCL3-201ENST00000264254 RAPGEF6Q8TEU7 1601 aa27.32■■□□□ 1.96
PDCL3-201ENST00000264254 CASKIN1Q8WXD9 1431 aa27.28■■□□□ 1.96
PDCL3-201ENST00000264254 ATP1B4Q9UN42 357 aaPredicted RBP27.26■■□□□ 1.95
PDCL3-201ENST00000264254 NUP153P49790 1475 aaKnown RBP27.26■■□□□ 1.95
PDCL3-201ENST00000264254 FYCO1Q9BQS8 1478 aa27.23■■□□□ 1.95
PDCL3-201ENST00000264254 MAPKBP1O60336 1514 aa27.22■■□□□ 1.95
PDCL3-201ENST00000264254 ATP10BO94823 1461 aa27.22■■□□□ 1.95
PDCL3-201ENST00000264254 HECW1Q76N89 1606 aa27.22■■□□□ 1.95
PDCL3-201ENST00000264254 VPS8Q8N3P4 1428 aa27.22■■□□□ 1.95
PDCL3-201ENST00000264254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.21■■□□□ 1.95
PDCL3-201ENST00000264254 HNRNPUL2Q1KMD3 747 aaKnown RBP27.21■■□□□ 1.95
PDCL3-201ENST00000264254 CDK11AQ9UQ88 783 aaPredicted RBP27.18■■□□□ 1.94
PDCL3-201ENST00000264254 ARID3CA6NKF2 412 aa27.17■■□□□ 1.94
PDCL3-201ENST00000264254 ASXL2Q76L83 1435 aa27.16■■□□□ 1.94
PDCL3-201ENST00000264254 CCDC18Q5T9S5 1454 aa27.16■■□□□ 1.94
PDCL3-201ENST00000264254 ZCCHC11Q5TAX3 1644 aaKnown RBP27.16■■□□□ 1.94
PDCL3-201ENST00000264254 EPRSP07814 1512 aaKnown RBP27.15■■□□□ 1.94
PDCL3-201ENST00000264254 PCF11O94913 1555 aaKnown RBP27.15■■□□□ 1.94
PDCL3-201ENST00000264254 PLEKHD1A6NEE1 506 aa27.15■■□□□ 1.94
PDCL3-201ENST00000264254 WDR7Q9Y4E6 1490 aa27.11■■□□□ 1.93
PDCL3-201ENST00000264254 TRHP20396 242 aaPredicted RBP27.08■■□□□ 1.93
PDCL3-201ENST00000264254 ABCC10Q5T3U5 1492 aa27.07■■□□□ 1.92
PDCL3-201ENST00000264254 CDK13Q14004 1512 aaKnown RBP27.06■■□□□ 1.92
PDCL3-201ENST00000264254 APLP2Q06481 763 aa27.02■■□□□ 1.92
PDCL3-201ENST00000264254 FAM69CQ0P6D2 419 aa27.02■■□□□ 1.92
PDCL3-201ENST00000264254 KCNH8Q96L42 1107 aa27■■□□□ 1.91
PDCL3-201ENST00000264254 TROQ12816 1431 aaPredicted RBP26.97■■□□□ 1.91
PDCL3-201ENST00000264254 MAP3K1Q13233 1512 aa26.96■■□□□ 1.91
PDCL3-201ENST00000264254 GLI2P10070 1586 aa26.94■■□□□ 1.9
PDCL3-201ENST00000264254 DIP2BQ9P265 1576 aa26.94■■□□□ 1.9
PDCL3-201ENST00000264254 MTUS2Q5JR59 1369 aa26.92■■□□□ 1.9
PDCL3-201ENST00000264254 TIAM1Q13009 1591 aa26.87■■□□□ 1.89
PDCL3-201ENST00000264254 LRRIQ1Q96JM4 1722 aa26.87■■□□□ 1.89
PDCL3-201ENST00000264254 CD109Q6YHK3 1445 aa26.84■■□□□ 1.89
PDCL3-201ENST00000264254 EHBP1L1Q8N3D4 1523 aa26.82■■□□□ 1.88
PDCL3-201ENST00000264254 KIF14Q15058 1648 aa26.81■■□□□ 1.88
PDCL3-201ENST00000264254 LRRC9Q6ZRR7 1453 aa26.81■■□□□ 1.88
PDCL3-201ENST00000264254 CFAP43Q8NDM7 1665 aa26.81■■□□□ 1.88
PDCL3-201ENST00000264254 MAGI3Q5TCQ9 1506 aa26.81■■□□□ 1.88
PDCL3-201ENST00000264254 ABCA9Q8IUA7 1624 aa26.8■■□□□ 1.88
PDCL3-201ENST00000264254 KIF13AQ9H1H9 1805 aa26.77■■□□□ 1.88
PDCL3-201ENST00000264254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.77■■□□□ 1.88
PDCL3-201ENST00000264254 TEX14Q8IWB6 1497 aa26.76■■□□□ 1.87
PDCL3-201ENST00000264254 MAP3K4Q9Y6R4 1608 aa26.76■■□□□ 1.87
PDCL3-201ENST00000264254 KANK4Q5T7N3 995 aaPredicted RBP26.75■■□□□ 1.87
PDCL3-201ENST00000264254 PLCH2O75038 1416 aa26.72■■□□□ 1.87
PDCL3-201ENST00000264254 PHLDB1Q86UU1 1377 aa26.71■■□□□ 1.87
PDCL3-201ENST00000264254 CCNB3Q8WWL7 1395 aa26.7■■□□□ 1.86
PDCL3-201ENST00000264254 TTC37Q6PGP7 1564 aa26.67■■□□□ 1.86
PDCL3-201ENST00000264254 ARAP3Q8WWN8 1544 aa26.67■■□□□ 1.86
PDCL3-201ENST00000264254 EFCAB2Q5VUJ9 269 aa26.66■■□□□ 1.86
PDCL3-201ENST00000264254 NCOA2Q15596 1464 aa26.66■■□□□ 1.86
PDCL3-201ENST00000264254 NEO1Q92859 1461 aa26.64■■□□□ 1.86
PDCL3-201ENST00000264254 SUPT6HQ7KZ85 1726 aaKnown RBP26.64■■□□□ 1.85
PDCL3-201ENST00000264254 GPATCH8Q9UKJ3 1502 aaKnown RBP26.62■■□□□ 1.85
PDCL3-201ENST00000264254 FANCAO15360 1455 aa26.62■■□□□ 1.85
PDCL3-201ENST00000264254 CFDP1Q9UEE9 299 aaPredicted RBP26.61■■□□□ 1.85
PDCL3-201ENST00000264254 ARHGAP5Q13017 1502 aa26.57■■□□□ 1.84
PDCL3-201ENST00000264254 CFAP74Q9C0B2 1584 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms