RNA–Protein interactions for RNA: ENST00000264234.7

UPK1B-201, Transcript of uroplakin 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK1B, Length 2,118 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1B-201ENST00000264234 NUP160Q12769 1436 aa18.73■□□□□ 0.59
UPK1B-201ENST00000264234 KIAA0586Q9BVV6 1533 aa18.66■□□□□ 0.58
UPK1B-201ENST00000264234 RANGAP1P46060 587 aaPredicted RBP18.65■□□□□ 0.58
UPK1B-201ENST00000264234 CLASP1Q7Z460 1538 aa18.63■□□□□ 0.57
UPK1B-201ENST00000264234 JPH4Q96JJ6 628 aa18.61■□□□□ 0.57
UPK1B-201ENST00000264234 IQGAP2Q13576 1575 aa18.6■□□□□ 0.57
UPK1B-201ENST00000264234 CTTNBP2Q8WZ74 1663 aa18.6■□□□□ 0.57
UPK1B-201ENST00000264234 TNIKQ9UKE5 1360 aa18.58■□□□□ 0.57
UPK1B-201ENST00000264234 PRG4Q92954 1404 aaPredicted RBP18.53■□□□□ 0.56
UPK1B-201ENST00000264234 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
UPK1B-201ENST00000264234 P3H3Q8IVL6 736 aa18.5■□□□□ 0.55
UPK1B-201ENST00000264234 UGGT2Q9NYU1 1516 aa18.5■□□□□ 0.55
UPK1B-201ENST00000264234 ERCC6L2Q5T890 1561 aa18.47■□□□□ 0.55
UPK1B-201ENST00000264234 TTBK1Q5TCY1 1321 aaPredicted RBP18.47■□□□□ 0.55
UPK1B-201ENST00000264234 CEP162Q5TB80 1403 aa18.46■□□□□ 0.55
UPK1B-201ENST00000264234 DISP1Q96F81 1524 aa18.46■□□□□ 0.55
UPK1B-201ENST00000264234 CARMIL2Q6F5E8 1435 aa18.46■□□□□ 0.55
UPK1B-201ENST00000264234 CLIP1P30622 1438 aa18.45■□□□□ 0.54
UPK1B-201ENST00000264234 DNAJC5Q9H3Z4 198 aa18.44■□□□□ 0.54
UPK1B-201ENST00000264234 ARHGEF11O15085 1522 aa18.44■□□□□ 0.54
UPK1B-201ENST00000264234 KIAA0556O60303 1618 aa18.42■□□□□ 0.54
UPK1B-201ENST00000264234 ARHGAP35Q9NRY4 1499 aa18.41■□□□□ 0.54
UPK1B-201ENST00000264234 SAMD9Q5K651 1589 aa18.4■□□□□ 0.54
UPK1B-201ENST00000264234 FHOD3Q2V2M9 1422 aa18.4■□□□□ 0.54
UPK1B-201ENST00000264234 EFCAB5A4FU69 1503 aa18.4■□□□□ 0.54
UPK1B-201ENST00000264234 RIMBP3CA6NJZ7 1639 aa18.38■□□□□ 0.53
UPK1B-201ENST00000264234 RIMBP3BA6NNM3 1639 aa18.38■□□□□ 0.53
UPK1B-201ENST00000264234 RIMBP3Q9UFD9 1639 aa18.38■□□□□ 0.53
UPK1B-201ENST00000264234 PTPRGP23470 1445 aa18.35■□□□□ 0.53
UPK1B-201ENST00000264234 ARAP1Q96P48 1450 aa18.34■□□□□ 0.53
UPK1B-201ENST00000264234 CYB5RLQ6IPT4 315 aa18.33■□□□□ 0.52
UPK1B-201ENST00000264234 FMN1Q68DA7 1419 aa18.26■□□□□ 0.51
UPK1B-201ENST00000264234 PLB1Q6P1J6 1458 aa18.26■□□□□ 0.51
UPK1B-201ENST00000264234 ATP1B4Q9UN42 357 aaPredicted RBP18.25■□□□□ 0.51
UPK1B-201ENST00000264234 UACAQ9BZF9 1416 aa18.23■□□□□ 0.51
UPK1B-201ENST00000264234 ARID3CA6NKF2 412 aa18.22■□□□□ 0.51
UPK1B-201ENST00000264234 VPS8Q8N3P4 1428 aa18.19■□□□□ 0.5
UPK1B-201ENST00000264234 ABCA8O94911 1581 aa18.19■□□□□ 0.5
UPK1B-201ENST00000264234 RAPGEF6Q8TEU7 1601 aa18.17■□□□□ 0.5
UPK1B-201ENST00000264234 PCF11O94913 1555 aaKnown RBP18.16■□□□□ 0.5
UPK1B-201ENST00000264234 ABCC2Q92887 1545 aa18.16■□□□□ 0.5
UPK1B-201ENST00000264234 HRCP23327 699 aa18.16■□□□□ 0.5
UPK1B-201ENST00000264234 CASKIN1Q8WXD9 1431 aa18.15■□□□□ 0.5
UPK1B-201ENST00000264234 ADCY10Q96PN6 1610 aa18.15■□□□□ 0.5
UPK1B-201ENST00000264234 UHRF1BP1LA0JNW5 1464 aa18.14■□□□□ 0.49
UPK1B-201ENST00000264234 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.13■□□□□ 0.49
UPK1B-201ENST00000264234 HNRNPUL2Q1KMD3 747 aaKnown RBP18.13■□□□□ 0.49
UPK1B-201ENST00000264234 NUP153P49790 1475 aaKnown RBP18.13■□□□□ 0.49
UPK1B-201ENST00000264234 FYCO1Q9BQS8 1478 aa18.12■□□□□ 0.49
UPK1B-201ENST00000264234 NPM1P06748 294 aaKnown RBP eCLIP18.11■□□□□ 0.49
UPK1B-201ENST00000264234 HECW1Q76N89 1606 aa18.1■□□□□ 0.49
UPK1B-201ENST00000264234 ATP10BO94823 1461 aa18.08■□□□□ 0.48
UPK1B-201ENST00000264234 EPRSP07814 1512 aaKnown RBP18.07■□□□□ 0.48
UPK1B-201ENST00000264234 CDK13Q14004 1512 aaKnown RBP18.07■□□□□ 0.48
UPK1B-201ENST00000264234 KDM5BQ9UGL1 1544 aa18.07■□□□□ 0.48
UPK1B-201ENST00000264234 APLP2Q06481 763 aa18.04■□□□□ 0.48
UPK1B-201ENST00000264234 ZCCHC11Q5TAX3 1644 aaKnown RBP18.04■□□□□ 0.48
UPK1B-201ENST00000264234 LRRIQ1Q96JM4 1722 aa18.02■□□□□ 0.48
UPK1B-201ENST00000264234 CCDC18Q5T9S5 1454 aa18.02■□□□□ 0.48
UPK1B-201ENST00000264234 PLEKHD1A6NEE1 506 aa17.99■□□□□ 0.47
UPK1B-201ENST00000264234 CDK11AQ9UQ88 783 aaPredicted RBP17.99■□□□□ 0.47
UPK1B-201ENST00000264234 ASXL2Q76L83 1435 aa17.98■□□□□ 0.47
UPK1B-201ENST00000264234 KCNH8Q96L42 1107 aa17.96■□□□□ 0.47
UPK1B-201ENST00000264234 TIAM1Q13009 1591 aa17.96■□□□□ 0.47
UPK1B-201ENST00000264234 KANK4Q5T7N3 995 aaPredicted RBP17.95■□□□□ 0.46
UPK1B-201ENST00000264234 PPARGC1BQ86YN6 1023 aaKnown RBP17.95■□□□□ 0.46
UPK1B-201ENST00000264234 MTUS2Q5JR59 1369 aa17.94■□□□□ 0.46
UPK1B-201ENST00000264234 MAPKBP1O60336 1514 aa17.94■□□□□ 0.46
UPK1B-201ENST00000264234 WDR7Q9Y4E6 1490 aa17.93■□□□□ 0.46
UPK1B-201ENST00000264234 MAGI3Q5TCQ9 1506 aa17.93■□□□□ 0.46
UPK1B-201ENST00000264234 CFAP43Q8NDM7 1665 aa17.92■□□□□ 0.46
UPK1B-201ENST00000264234 MAP3K1Q13233 1512 aa17.92■□□□□ 0.46
UPK1B-201ENST00000264234 TROQ12816 1431 aaPredicted RBP17.9■□□□□ 0.46
UPK1B-201ENST00000264234 LRRC9Q6ZRR7 1453 aa17.9■□□□□ 0.46
UPK1B-201ENST00000264234 EHBP1L1Q8N3D4 1523 aa17.86■□□□□ 0.45
UPK1B-201ENST00000264234 FAM69CQ0P6D2 419 aa17.86■□□□□ 0.45
UPK1B-201ENST00000264234 TRHP20396 242 aaPredicted RBP17.85■□□□□ 0.45
UPK1B-201ENST00000264234 ABCC10Q5T3U5 1492 aa17.84■□□□□ 0.45
UPK1B-201ENST00000264234 KIF14Q15058 1648 aa17.83■□□□□ 0.44
UPK1B-201ENST00000264234 PELP1Q8IZL8 1130 aaKnown RBP17.83■□□□□ 0.44
UPK1B-201ENST00000264234 DIP2BQ9P265 1576 aa17.8■□□□□ 0.44
UPK1B-201ENST00000264234 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.79■□□□□ 0.44
UPK1B-201ENST00000264234 NCOA2Q15596 1464 aa17.79■□□□□ 0.44
UPK1B-201ENST00000264234 SUPT6HQ7KZ85 1726 aaKnown RBP17.77■□□□□ 0.44
UPK1B-201ENST00000264234 TTC37Q6PGP7 1564 aa17.77■□□□□ 0.44
UPK1B-201ENST00000264234 CCNB3Q8WWL7 1395 aa17.75■□□□□ 0.43
UPK1B-201ENST00000264234 GLI2P10070 1586 aa17.75■□□□□ 0.43
UPK1B-201ENST00000264234 CD109Q6YHK3 1445 aa17.75■□□□□ 0.43
UPK1B-201ENST00000264234 ABCA9Q8IUA7 1624 aa17.74■□□□□ 0.43
UPK1B-201ENST00000264234 PHLDB1Q86UU1 1377 aa17.73■□□□□ 0.43
UPK1B-201ENST00000264234 KIF13AQ9H1H9 1805 aa17.73■□□□□ 0.43
UPK1B-201ENST00000264234 GPATCH8Q9UKJ3 1502 aaKnown RBP17.71■□□□□ 0.43
UPK1B-201ENST00000264234 CFDP1Q9UEE9 299 aaPredicted RBP17.7■□□□□ 0.42
UPK1B-201ENST00000264234 MAP3K4Q9Y6R4 1608 aa17.7■□□□□ 0.42
UPK1B-201ENST00000264234 PLCH2O75038 1416 aa17.69■□□□□ 0.42
UPK1B-201ENST00000264234 ZNF777Q9ULD5 760 aaPredicted RBP17.69■□□□□ 0.42
UPK1B-201ENST00000264234 MYOM3Q5VTT5 1437 aa17.68■□□□□ 0.42
UPK1B-201ENST00000264234 ARHGAP5Q13017 1502 aa17.67■□□□□ 0.42
UPK1B-201ENST00000264234 TSPOAP1O95153 1857 aa17.67■□□□□ 0.42
UPK1B-201ENST00000264234 MYO5CQ9NQX4 1742 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms