RNA–Protein interactions for RNA: ENST00000263335.11

PAX8-202, Transcript of paired box 8, humanhuman

TSL 1 (best) BASIC

Gene PAX8, Length 3,735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX8-202ENST00000263335 MAPKBP1O60336 1514 aa18.44■□□□□ 0.54
PAX8-202ENST00000263335 SETD5Q9C0A6 1442 aa18.44■□□□□ 0.54
PAX8-202ENST00000263335 MSH5O43196 834 aa18.43■□□□□ 0.54
PAX8-202ENST00000263335 HNRNPUQ00839 825 aaKnown RBP eCLIP18.43■□□□□ 0.54
PAX8-202ENST00000263335 TOP2BQ02880 1626 aa18.41■□□□□ 0.54
PAX8-202ENST00000263335 ARHGAP35Q9NRY4 1499 aa18.41■□□□□ 0.54
PAX8-202ENST00000263335 KIF27Q86VH2 1401 aa18.41■□□□□ 0.54
PAX8-202ENST00000263335 BICRAQ9NZM4 1560 aa18.39■□□□□ 0.53
PAX8-202ENST00000263335 ERICH3Q5RHP9 1530 aa18.38■□□□□ 0.53
PAX8-202ENST00000263335 CUX2O14529 1486 aa18.38■□□□□ 0.53
PAX8-202ENST00000263335 CDK11AQ9UQ88 783 aaPredicted RBP18.36■□□□□ 0.53
PAX8-202ENST00000263335 CCER2I3L3R5 266 aa18.36■□□□□ 0.53
PAX8-202ENST00000263335 PHLDB1Q86UU1 1377 aa18.36■□□□□ 0.53
PAX8-202ENST00000263335 PEG3Q9GZU2 1588 aa18.35■□□□□ 0.53
PAX8-202ENST00000263335 TONSLQ96HA7 1378 aa18.32■□□□□ 0.52
PAX8-202ENST00000263335 SENP3-EIF4A1A0A087X0R7 540 aa18.3■□□□□ 0.52
PAX8-202ENST00000263335 CUX1P39880 1505 aa18.27■□□□□ 0.52
PAX8-202ENST00000263335 POLR3GLQ9BT43 218 aa18.26■□□□□ 0.51
PAX8-202ENST00000263335 LRRC9Q6ZRR7 1453 aa18.22■□□□□ 0.51
PAX8-202ENST00000263335 BIVM-ERCC5R4GMW8 1640 aa18.22■□□□□ 0.51
PAX8-202ENST00000263335 FAM9BQ8IZU0 186 aa18.21■□□□□ 0.51
PAX8-202ENST00000263335 TIMELESSQ9UNS1 1208 aa18.21■□□□□ 0.51
PAX8-202ENST00000263335 NBR1Q14596 966 aa18.21■□□□□ 0.51
PAX8-202ENST00000263335 B4GALNT3Q6L9W6 998 aa18.2■□□□□ 0.5
PAX8-202ENST00000263335 TIAM1Q13009 1591 aa18.2■□□□□ 0.5
PAX8-202ENST00000263335 IGF1RP08069 1367 aa18.19■□□□□ 0.5
PAX8-202ENST00000263335 CARMIL1Q5VZK9 1371 aa18.18■□□□□ 0.5
PAX8-202ENST00000263335 CCDC184Q52MB2 194 aa18.16■□□□□ 0.5
PAX8-202ENST00000263335 FANCIQ9NVI1 1328 aa18.15■□□□□ 0.5
PAX8-202ENST00000263335 CHIC2Q9UKJ5 165 aa18.12■□□□□ 0.49
PAX8-202ENST00000263335 FHOD3Q2V2M9 1422 aa18.12■□□□□ 0.49
PAX8-202ENST00000263335 HSPA5P11021 654 aaKnown RBP18.11■□□□□ 0.49
PAX8-202ENST00000263335 PPP4R2Q9NY27 417 aa18.1■□□□□ 0.49
PAX8-202ENST00000263335 RRP7BPQ9NSQ0 103 aa18.09■□□□□ 0.49
PAX8-202ENST00000263335 WASHC2AQ641Q2 1341 aa18.08■□□□□ 0.48
PAX8-202ENST00000263335 FHAD1B1AJZ9 1412 aa18.08■□□□□ 0.48
PAX8-202ENST00000263335 DEKP35659 375 aaKnown RBP18.08■□□□□ 0.48
PAX8-202ENST00000263335 MRS2Q9HD23 443 aa18.08■□□□□ 0.48
PAX8-202ENST00000263335 CCDC18Q5T9S5 1454 aa18.04■□□□□ 0.48
PAX8-202ENST00000263335 MTUS2Q5JR59 1369 aa18.03■□□□□ 0.48
PAX8-202ENST00000263335 FOXD1Q16676 465 aa18.03■□□□□ 0.48
PAX8-202ENST00000263335 EIF4G2P78344 907 aaKnown RBP eCLIP18.02■□□□□ 0.47
PAX8-202ENST00000263335 PCF11O94913 1555 aaKnown RBP18.01■□□□□ 0.47
PAX8-202ENST00000263335 MAP3K1Q13233 1512 aa17.99■□□□□ 0.47
PAX8-202ENST00000263335 ARID3CA6NKF2 412 aa17.99■□□□□ 0.47
PAX8-202ENST00000263335 PTPRKQ15262 1439 aa17.98■□□□□ 0.47
PAX8-202ENST00000263335 PAK3O75914 559 aaPredicted RBP17.98■□□□□ 0.47
PAX8-202ENST00000263335 CFTRP13569 1480 aa17.98■□□□□ 0.47
PAX8-202ENST00000263335 C11orf95C9JLR9 678 aaPredicted RBP17.98■□□□□ 0.47
PAX8-202ENST00000263335 NPM2Q86SE8 214 aaKnown RBP17.98■□□□□ 0.47
PAX8-202ENST00000263335 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
PAX8-202ENST00000263335 FGD6Q6ZV73 1430 aa17.97■□□□□ 0.47
PAX8-202ENST00000263335 NOP58Q9Y2X3 529 aaKnown RBP17.96■□□□□ 0.47
PAX8-202ENST00000263335 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.46
PAX8-202ENST00000263335 UACAQ9BZF9 1416 aa17.95■□□□□ 0.46
PAX8-202ENST00000263335 PRKRIP1Q9H875 184 aaPredicted RBP17.95■□□□□ 0.46
PAX8-202ENST00000263335 FGD5Q6ZNL6 1462 aa17.94■□□□□ 0.46
PAX8-202ENST00000263335 RTL5Q5HYW3 569 aaPredicted RBP17.93■□□□□ 0.46
PAX8-202ENST00000263335 L3MBTL2Q969R5 705 aa17.93■□□□□ 0.46
PAX8-202ENST00000263335 NCAPD3P42695 1498 aa17.92■□□□□ 0.46
PAX8-202ENST00000263335 ERICH6BQ5W0A0 696 aa17.9■□□□□ 0.46
PAX8-202ENST00000263335 CCDC136Q96JN2 1154 aa17.9■□□□□ 0.46
PAX8-202ENST00000263335 HFM1A2PYH4 1435 aa17.89■□□□□ 0.45
PAX8-202ENST00000263335 ZNF326Q5BKZ1 582 aaKnown RBP17.88■□□□□ 0.45
PAX8-202ENST00000263335 NAIPQ13075 1403 aa17.88■□□□□ 0.45
PAX8-202ENST00000263335 CASKIN1Q8WXD9 1431 aa17.86■□□□□ 0.45
PAX8-202ENST00000263335 ZBED9Q6R2W3 1325 aa17.86■□□□□ 0.45
PAX8-202ENST00000263335 SALL2Q9Y467 1007 aaPredicted RBP17.86■□□□□ 0.45
PAX8-202ENST00000263335 ANP32AP39687 249 aaKnown RBP17.85■□□□□ 0.45
PAX8-202ENST00000263335 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
PAX8-202ENST00000263335 CNTLNQ9NXG0 1405 aa17.85■□□□□ 0.45
PAX8-202ENST00000263335 RAD54L2Q9Y4B4 1467 aa17.85■□□□□ 0.45
PAX8-202ENST00000263335 FMN1Q68DA7 1419 aa17.85■□□□□ 0.45
PAX8-202ENST00000263335 CFAP43Q8NDM7 1665 aa17.84■□□□□ 0.45
PAX8-202ENST00000263335 FYCO1Q9BQS8 1478 aa17.84■□□□□ 0.45
PAX8-202ENST00000263335 AKNAQ7Z591 1439 aa17.84■□□□□ 0.45
PAX8-202ENST00000263335 MPHOSPH9Q99550 1183 aa17.84■□□□□ 0.45
PAX8-202ENST00000263335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.83■□□□□ 0.44
PAX8-202ENST00000263335 PTPN23Q9H3S7 1636 aa17.82■□□□□ 0.44
PAX8-202ENST00000263335 CCDC7Q96M83 1385 aa17.82■□□□□ 0.44
PAX8-202ENST00000263335 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
PAX8-202ENST00000263335 ZBTB47Q9UFB7 747 aaPredicted RBP17.81■□□□□ 0.44
PAX8-202ENST00000263335 CADPSQ9ULU8 1353 aa17.81■□□□□ 0.44
PAX8-202ENST00000263335 NBPF8Q3BBV2 869 aa17.81■□□□□ 0.44
PAX8-202ENST00000263335 NCOA2Q15596 1464 aa17.79■□□□□ 0.44
PAX8-202ENST00000263335 KIF7Q2M1P5 1343 aa17.78■□□□□ 0.44
PAX8-202ENST00000263335 MYOM3Q5VTT5 1437 aa17.77■□□□□ 0.44
PAX8-202ENST00000263335 KDM5BQ9UGL1 1544 aa17.76■□□□□ 0.43
PAX8-202ENST00000263335 IPO9Q96P70 1041 aaKnown RBP17.75■□□□□ 0.43
PAX8-202ENST00000263335 EIF5BO60841 1220 aaKnown RBP17.74■□□□□ 0.43
PAX8-202ENST00000263335 LAS1LQ9Y4W2 734 aaKnown RBP17.73■□□□□ 0.43
PAX8-202ENST00000263335 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
PAX8-202ENST00000263335 NUDCQ9Y266 331 aa17.72■□□□□ 0.43
PAX8-202ENST00000263335 ANO8Q9HCE9 1232 aaPredicted RBP17.71■□□□□ 0.43
PAX8-202ENST00000263335 NCOA1Q15788 1441 aa17.7■□□□□ 0.42
PAX8-202ENST00000263335 TDRD9Q8NDG6 1382 aaKnown RBP17.7■□□□□ 0.42
PAX8-202ENST00000263335 TMC1Q8TDI8 760 aa17.7■□□□□ 0.42
PAX8-202ENST00000263335 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.68■□□□□ 0.42
PAX8-202ENST00000263335 IL27Q8NEV9 243 aa17.67■□□□□ 0.42
PAX8-202ENST00000263335 EFCAB5A4FU69 1503 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms