RNA–Protein interactions for RNA: ENST00000263125.9

PRKCQ-201, Transcript of protein kinase C theta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCQ, Length 3,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-201ENST00000263125 SYNJ1O43426 1573 aa16.94■□□□□ 0.3
PRKCQ-201ENST00000263125 B4GALNT3Q6L9W6 998 aa16.93■□□□□ 0.3
PRKCQ-201ENST00000263125 IL27Q8NEV9 243 aa16.92■□□□□ 0.3
PRKCQ-201ENST00000263125 RRBP1Q9P2E9 1410 aaKnown RBP16.92■□□□□ 0.3
PRKCQ-201ENST00000263125 MYT1LQ9UL68 1186 aa16.92■□□□□ 0.3
PRKCQ-201ENST00000263125 CCNB3Q8WWL7 1395 aa16.91■□□□□ 0.3
PRKCQ-201ENST00000263125 NOP58Q9Y2X3 529 aaKnown RBP16.9■□□□□ 0.3
PRKCQ-201ENST00000263125 ARAP1Q96P48 1450 aa16.89■□□□□ 0.29
PRKCQ-201ENST00000263125 BAZ1BQ9UIG0 1483 aaKnown RBP16.89■□□□□ 0.29
PRKCQ-201ENST00000263125 CUX2O14529 1486 aa16.88■□□□□ 0.29
PRKCQ-201ENST00000263125 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.88■□□□□ 0.29
PRKCQ-201ENST00000263125 SMARCA4P51532 1647 aa16.85■□□□□ 0.29
PRKCQ-201ENST00000263125 PPP4R2Q9NY27 417 aa16.83■□□□□ 0.28
PRKCQ-201ENST00000263125 CCDC184Q52MB2 194 aa16.77■□□□□ 0.28
PRKCQ-201ENST00000263125 SETD5Q9C0A6 1442 aa16.75■□□□□ 0.27
PRKCQ-201ENST00000263125 FAM50AQ14320 339 aaKnown RBP16.73■□□□□ 0.27
PRKCQ-201ENST00000263125 RTL5Q5HYW3 569 aaPredicted RBP16.72■□□□□ 0.27
PRKCQ-201ENST00000263125 ERICH6BQ5W0A0 696 aa16.72■□□□□ 0.27
PRKCQ-201ENST00000263125 FAM9BQ8IZU0 186 aa16.68■□□□□ 0.26
PRKCQ-201ENST00000263125 IPO9Q96P70 1041 aaKnown RBP16.65■□□□□ 0.26
PRKCQ-201ENST00000263125 SENP3-EIF4A1A0A087X0R7 540 aa16.65■□□□□ 0.26
PRKCQ-201ENST00000263125 ZBTB47Q9UFB7 747 aaPredicted RBP16.64■□□□□ 0.25
PRKCQ-201ENST00000263125 ANP32AP39687 249 aaKnown RBP16.63■□□□□ 0.25
PRKCQ-201ENST00000263125 PHLDB1Q86UU1 1377 aa16.62■□□□□ 0.25
PRKCQ-201ENST00000263125 LAS1LQ9Y4W2 734 aaKnown RBP16.62■□□□□ 0.25
PRKCQ-201ENST00000263125 PRXQ9BXM0 1461 aa16.61■□□□□ 0.25
PRKCQ-201ENST00000263125 TONSLQ96HA7 1378 aa16.61■□□□□ 0.25
PRKCQ-201ENST00000263125 ARHGAP35Q9NRY4 1499 aa16.6■□□□□ 0.25
PRKCQ-201ENST00000263125 NPM2Q86SE8 214 aaKnown RBP16.6■□□□□ 0.25
PRKCQ-201ENST00000263125 WASHC2AQ641Q2 1341 aa16.59■□□□□ 0.25
PRKCQ-201ENST00000263125 UBE2Q2Q8WVN8 375 aa16.58■□□□□ 0.24
PRKCQ-201ENST00000263125 TIMELESSQ9UNS1 1208 aa16.58■□□□□ 0.24
PRKCQ-201ENST00000263125 AKNAQ7Z591 1439 aa16.56■□□□□ 0.24
PRKCQ-201ENST00000263125 CNGB1Q14028 1251 aaPredicted RBP16.55■□□□□ 0.24
PRKCQ-201ENST00000263125 ERICH3Q5RHP9 1530 aa16.55■□□□□ 0.24
PRKCQ-201ENST00000263125 BRPF3Q9ULD4 1205 aa16.54■□□□□ 0.24
PRKCQ-201ENST00000263125 NEFMP07197 916 aa16.54■□□□□ 0.24
PRKCQ-201ENST00000263125 MRS2Q9HD23 443 aa16.54■□□□□ 0.24
PRKCQ-201ENST00000263125 EIF5BO60841 1220 aaKnown RBP16.53■□□□□ 0.24
PRKCQ-201ENST00000263125 ATP1B4Q9UN42 357 aaPredicted RBP16.53■□□□□ 0.24
PRKCQ-201ENST00000263125 HSPA5P11021 654 aaKnown RBP16.52■□□□□ 0.23
PRKCQ-201ENST00000263125 PABPN1Q86U42 306 aaKnown RBP eCLIP16.51■□□□□ 0.23
PRKCQ-201ENST00000263125 ZBED9Q6R2W3 1325 aa16.49■□□□□ 0.23
PRKCQ-201ENST00000263125 C11orf95C9JLR9 678 aaPredicted RBP16.48■□□□□ 0.23
PRKCQ-201ENST00000263125 TIAM1Q13009 1591 aa16.48■□□□□ 0.23
PRKCQ-201ENST00000263125 TOP2BQ02880 1626 aa16.48■□□□□ 0.23
PRKCQ-201ENST00000263125 P3H3Q8IVL6 736 aa16.47■□□□□ 0.23
PRKCQ-201ENST00000263125 PRKRIP1Q9H875 184 aaPredicted RBP16.47■□□□□ 0.23
PRKCQ-201ENST00000263125 LRRC9Q6ZRR7 1453 aa16.47■□□□□ 0.23
PRKCQ-201ENST00000263125 FHAD1B1AJZ9 1412 aa16.41■□□□□ 0.22
PRKCQ-201ENST00000263125 KDM5BQ9UGL1 1544 aa16.4■□□□□ 0.22
PRKCQ-201ENST00000263125 CNTLNQ9NXG0 1405 aa16.4■□□□□ 0.22
PRKCQ-201ENST00000263125 WASHC2CQ9Y4E1 1318 aa16.4■□□□□ 0.22
PRKCQ-201ENST00000263125 AQRO60306 1485 aaKnown RBP eCLIP16.38■□□□□ 0.212e-7■■■■■ 38
PRKCQ-201ENST00000263125 UNC13AQ9UPW8 1703 aa16.37■□□□□ 0.21
PRKCQ-201ENST00000263125 PEG3Q9GZU2 1588 aa16.37■□□□□ 0.21
PRKCQ-201ENST00000263125 CCDC18Q5T9S5 1454 aa16.37■□□□□ 0.21
PRKCQ-201ENST00000263125 SKAP1Q86WV1 359 aa16.36■□□□□ 0.21
PRKCQ-201ENST00000263125 NCAPD3P42695 1498 aa16.35■□□□□ 0.21
PRKCQ-201ENST00000263125 EIF4G2P78344 907 aaKnown RBP eCLIP16.35■□□□□ 0.21
PRKCQ-201ENST00000263125 KIF27Q86VH2 1401 aa16.35■□□□□ 0.21
PRKCQ-201ENST00000263125 NUDCQ9Y266 331 aa16.34■□□□□ 0.21
PRKCQ-201ENST00000263125 BIVM-ERCC5R4GMW8 1640 aa16.33■□□□□ 0.21
PRKCQ-201ENST00000263125 NCOA2Q15596 1464 aa16.33■□□□□ 0.2
PRKCQ-201ENST00000263125 PTPRKQ15262 1439 aa16.33■□□□□ 0.2
PRKCQ-201ENST00000263125 SMG6Q86US8 1419 aaKnown RBP16.33■□□□□ 0.2
PRKCQ-201ENST00000263125 PDE4AP27815 886 aa16.33■□□□□ 0.2
PRKCQ-201ENST00000263125 SLC4A3P48751 1232 aa16.32■□□□□ 0.2
PRKCQ-201ENST00000263125 USP35Q9P2H5 1018 aa16.31■□□□□ 0.2
PRKCQ-201ENST00000263125 RNF123Q5XPI4 1314 aa16.31■□□□□ 0.2
PRKCQ-201ENST00000263125 CCDC7Q96M83 1385 aa16.31■□□□□ 0.2
PRKCQ-201ENST00000263125 GSE1Q14687 1217 aa16.3■□□□□ 0.2
PRKCQ-201ENST00000263125 UACAQ9BZF9 1416 aa16.3■□□□□ 0.2
PRKCQ-201ENST00000263125 FRAT1Q92837 279 aaPredicted RBP16.3■□□□□ 0.2
PRKCQ-201ENST00000263125 EXOC6Q8TAG9 804 aa16.29■□□□□ 0.2
PRKCQ-201ENST00000263125 MAP3K1Q13233 1512 aa16.29■□□□□ 0.2
PRKCQ-201ENST00000263125 CUX1P39880 1505 aa16.28■□□□□ 0.2
PRKCQ-201ENST00000263125 ATAD2BQ9ULI0 1458 aa16.27■□□□□ 0.2
PRKCQ-201ENST00000263125 FOXD1Q16676 465 aa16.27■□□□□ 0.2
PRKCQ-201ENST00000263125 POLR3GLQ9BT43 218 aa16.27■□□□□ 0.2
PRKCQ-201ENST00000263125 BACH2Q9BYV9 841 aa16.26■□□□□ 0.19
PRKCQ-201ENST00000263125 PCF11O94913 1555 aaKnown RBP16.26■□□□□ 0.19
PRKCQ-201ENST00000263125 PPM1GO15355 546 aaPredicted RBP16.25■□□□□ 0.19
PRKCQ-201ENST00000263125 NFKBIBQ15653 356 aa16.25■□□□□ 0.19
PRKCQ-201ENST00000263125 NCOA1Q15788 1441 aa16.25■□□□□ 0.19
PRKCQ-201ENST00000263125 L3MBTL2Q969R5 705 aa16.25■□□□□ 0.19
PRKCQ-201ENST00000263125 KIF7Q2M1P5 1343 aa16.24■□□□□ 0.19
PRKCQ-201ENST00000263125 RRP7BPQ9NSQ0 103 aa16.23■□□□□ 0.19
PRKCQ-201ENST00000263125 CHIC2Q9UKJ5 165 aa16.22■□□□□ 0.19
PRKCQ-201ENST00000263125 PTPN23Q9H3S7 1636 aa16.22■□□□□ 0.19
PRKCQ-201ENST00000263125 HFM1A2PYH4 1435 aa16.21■□□□□ 0.19
PRKCQ-201ENST00000263125 NAIPQ13075 1403 aa16.21■□□□□ 0.19
PRKCQ-201ENST00000263125 FGD6Q6ZV73 1430 aa16.21■□□□□ 0.19
PRKCQ-201ENST00000263125 FHOD3Q2V2M9 1422 aa16.21■□□□□ 0.19
PRKCQ-201ENST00000263125 TCERG1O14776 1098 aaKnown RBP16.21■□□□□ 0.19
PRKCQ-201ENST00000263125 NBPF8Q3BBV2 869 aa16.21■□□□□ 0.19
PRKCQ-201ENST00000263125 DCAF11Q8TEB1 546 aa16.2■□□□□ 0.18
PRKCQ-201ENST00000263125 CFAP43Q8NDM7 1665 aa16.2■□□□□ 0.18
PRKCQ-201ENST00000263125 PKNOX2Q96KN3 472 aa16.2■□□□□ 0.18
PRKCQ-201ENST00000263125 IGF1RP08069 1367 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms