RNA–Protein interactions for RNA: ENST00000262209.4

TRPA1-201, Transcript of transient receptor potential cation channel subfamily A member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPA1, Length 5,223 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPA1-201ENST00000262209 PNNQ9H307 717 aaKnown RBP17.22■□□□□ 0.35
TRPA1-201ENST00000262209 L1TD1Q5T7N2 865 aaKnown RBP17.21■□□□□ 0.35
TRPA1-201ENST00000262209 ARID4BQ4LE39 1312 aaPredicted RBP17.2■□□□□ 0.34
TRPA1-201ENST00000262209 HSP90AA2PQ14568 343 aaPredicted RBP17.18■□□□□ 0.34
TRPA1-201ENST00000262209 RSPH6AQ9H0K4 717 aa17.17■□□□□ 0.34
TRPA1-201ENST00000262209 PPP4R2Q9NY27 417 aa17.16■□□□□ 0.34
TRPA1-201ENST00000262209 TSHZ2Q9NRE2 1034 aa17.15■□□□□ 0.34
TRPA1-201ENST00000262209 RSF1Q96T23 1441 aaPredicted RBP17.12■□□□□ 0.33
TRPA1-201ENST00000262209 MSNP26038 577 aaKnown RBP17.11■□□□□ 0.33
TRPA1-201ENST00000262209 TNNT3P45378 269 aaPredicted RBP17.11■□□□□ 0.33
TRPA1-201ENST00000262209 MRS2Q9HD23 443 aa17.11■□□□□ 0.33
TRPA1-201ENST00000262209 PKNOX2Q96KN3 472 aa17.11■□□□□ 0.33
TRPA1-201ENST00000262209 SALL2Q9Y467 1007 aaPredicted RBP17.09■□□□□ 0.33
TRPA1-201ENST00000262209 PODXL2Q9NZ53 605 aa17.09■□□□□ 0.33
TRPA1-201ENST00000262209 TMC1Q8TDI8 760 aa17.07■□□□□ 0.32
TRPA1-201ENST00000262209 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
TRPA1-201ENST00000262209 CHAF1AQ13111 956 aaPredicted RBP17.04■□□□□ 0.32
TRPA1-201ENST00000262209 TONSLQ96HA7 1378 aa17.02■□□□□ 0.32
TRPA1-201ENST00000262209 A0A0U1RQG5 324 aaPredicted RBP16.99■□□□□ 0.31
TRPA1-201ENST00000262209 ARID3AQ99856 593 aa16.98■□□□□ 0.31
TRPA1-201ENST00000262209 B4GALNT3Q6L9W6 998 aa16.94■□□□□ 0.3
TRPA1-201ENST00000262209 ANO8Q9HCE9 1232 aaPredicted RBP16.92■□□□□ 0.3
TRPA1-201ENST00000262209 TIMELESSQ9UNS1 1208 aa16.9■□□□□ 0.3
TRPA1-201ENST00000262209 PLCB2Q00722 1185 aa16.9■□□□□ 0.3
TRPA1-201ENST00000262209 USP35Q9P2H5 1018 aa16.87■□□□□ 0.29
TRPA1-201ENST00000262209 PTMSP20962 102 aa16.86■□□□□ 0.29
TRPA1-201ENST00000262209 IPO9Q96P70 1041 aaKnown RBP16.85■□□□□ 0.29
TRPA1-201ENST00000262209 ZRSR1Q15695 479 aaKnown RBP16.83■□□□□ 0.28
TRPA1-201ENST00000262209 NRDCO43847 1150 aa16.82■□□□□ 0.28
TRPA1-201ENST00000262209 WDR43Q15061 677 aaKnown RBP eCLIP16.81■□□□□ 0.28
TRPA1-201ENST00000262209 GOLGA6L3A6NEY3 463 aa16.8■□□□□ 0.28
TRPA1-201ENST00000262209 RGS3P49796 1198 aa16.8■□□□□ 0.28
TRPA1-201ENST00000262209 KIAA2012Q0VF49 1180 aa16.79■□□□□ 0.28
TRPA1-201ENST00000262209 GOLGA6L6A8MZA4 724 aa16.79■□□□□ 0.28
TRPA1-201ENST00000262209 RB1CC1Q8TDY2 1594 aa16.78■□□□□ 0.28
TRPA1-201ENST00000262209 CEP162Q5TB80 1403 aa16.78■□□□□ 0.28
TRPA1-201ENST00000262209 MYH16Q9H6N6 1097 aa16.78■□□□□ 0.28
TRPA1-201ENST00000262209 HIRIP3Q9BW71 556 aaPredicted RBP16.77■□□□□ 0.28
TRPA1-201ENST00000262209 HSP90AB1P08238 724 aaKnown RBP16.76■□□□□ 0.27
TRPA1-201ENST00000262209 P3H3Q8IVL6 736 aa16.75■□□□□ 0.27
TRPA1-201ENST00000262209 CECR2Q9BXF3 1484 aa16.75■□□□□ 0.27
TRPA1-201ENST00000262209 GSE1Q14687 1217 aa16.74■□□□□ 0.27
TRPA1-201ENST00000262209 GZF1Q9H116 711 aaPredicted RBP16.73■□□□□ 0.27
TRPA1-201ENST00000262209 HSCBQ8IWL3 235 aa16.71■□□□□ 0.27
TRPA1-201ENST00000262209 TPRNQ4KMQ1 711 aa16.71■□□□□ 0.27
TRPA1-201ENST00000262209 FANCIQ9NVI1 1328 aa16.69■□□□□ 0.26
TRPA1-201ENST00000262209 CLIP1P30622 1438 aa16.69■□□□□ 0.26
TRPA1-201ENST00000262209 APPP05067 770 aa16.69■□□□□ 0.26
TRPA1-201ENST00000262209 ZBTB7CA1YPR0 619 aa16.68■□□□□ 0.26
TRPA1-201ENST00000262209 EIF4G2P78344 907 aaKnown RBP eCLIP16.68■□□□□ 0.26
TRPA1-201ENST00000262209 GBP4Q96PP9 640 aa16.67■□□□□ 0.26
TRPA1-201ENST00000262209 TCERG1O14776 1098 aaKnown RBP16.66■□□□□ 0.26
TRPA1-201ENST00000262209 CALRP27797 417 aaKnown RBP16.66■□□□□ 0.26
TRPA1-201ENST00000262209 TNIKQ9UKE5 1360 aa16.65■□□□□ 0.26
TRPA1-201ENST00000262209 ZNF771Q7L3S4 317 aaPredicted RBP16.64■□□□□ 0.25
TRPA1-201ENST00000262209 CASC1Q6TDU7 716 aa16.63■□□□□ 0.25
TRPA1-201ENST00000262209 GOLGA3Q08378 1498 aa16.63■□□□□ 0.25
TRPA1-201ENST00000262209 EEA1Q15075 1411 aa16.63■□□□□ 0.25
TRPA1-201ENST00000262209 DRC7Q8IY82 874 aa16.63■□□□□ 0.25
TRPA1-201ENST00000262209 SLKQ9H2G2 1235 aaPredicted RBP16.63■□□□□ 0.25
TRPA1-201ENST00000262209 NACADO15069 1562 aa16.62■□□□□ 0.25
TRPA1-201ENST00000262209 SPRYD3Q8NCJ5 442 aa16.61■□□□□ 0.25
TRPA1-201ENST00000262209 CCER2I3L3R5 266 aa16.6■□□□□ 0.25
TRPA1-201ENST00000262209 FAM13BQ9NYF5 915 aa16.59■□□□□ 0.25
TRPA1-201ENST00000262209 MROH2BQ7Z745 1585 aa16.57■□□□□ 0.24
TRPA1-201ENST00000262209 SENP3-EIF4A1A0A087X0R7 540 aa16.57■□□□□ 0.24
TRPA1-201ENST00000262209 WRNQ14191 1432 aaPredicted RBP eCLIP16.57■□□□□ 0.24
TRPA1-201ENST00000262209 SETQ01105 290 aaPredicted RBP16.56■□□□□ 0.24
TRPA1-201ENST00000262209 MAP7D2Q96T17 732 aa16.56■□□□□ 0.24
TRPA1-201ENST00000262209 SOGA1O94964 1423 aa16.56■□□□□ 0.24
TRPA1-201ENST00000262209 UBE2Q2Q8WVN8 375 aa16.54■□□□□ 0.24
TRPA1-201ENST00000262209 GOLGA6L4A6NEF3 574 aa16.54■□□□□ 0.24
TRPA1-201ENST00000262209 GOLGA6L1Q8N7Z2 621 aa16.53■□□□□ 0.24
TRPA1-201ENST00000262209 BAZ1AQ9NRL2 1556 aaPredicted RBP16.51■□□□□ 0.23
TRPA1-201ENST00000262209 MTERF4Q7Z6M4 381 aaKnown RBP16.51■□□□□ 0.23
TRPA1-201ENST00000262209 FTSJ3Q8IY81 847 aaKnown RBP16.51■□□□□ 0.23
TRPA1-201ENST00000262209 ARID3CA6NKF2 412 aa16.49■□□□□ 0.23
TRPA1-201ENST00000262209 SYAP1Q96A49 352 aaPredicted RBP16.49■□□□□ 0.23
TRPA1-201ENST00000262209 FAM43AQ8N2R8 423 aa16.48■□□□□ 0.23
TRPA1-201ENST00000262209 IL27Q8NEV9 243 aa16.48■□□□□ 0.23
TRPA1-201ENST00000262209 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.47■□□□□ 0.23
TRPA1-201ENST00000262209 CEP164Q9UPV0 1460 aa16.47■□□□□ 0.23
TRPA1-201ENST00000262209 CALD1Q05682 793 aaKnown RBP16.46■□□□□ 0.23
TRPA1-201ENST00000262209 ABCC8Q09428 1581 aa16.46■□□□□ 0.23
TRPA1-201ENST00000262209 CCDC88BA6NC98 1476 aa16.45■□□□□ 0.22
TRPA1-201ENST00000262209 HTATSF1O43719 755 aaKnown RBP16.42■□□□□ 0.22
TRPA1-201ENST00000262209 RRP9O43818 475 aaKnown RBP16.42■□□□□ 0.22
TRPA1-201ENST00000262209 DDX11L8A8MPP1 907 aa16.42■□□□□ 0.22
TRPA1-201ENST00000262209 PDE4CQ08493 712 aa16.42■□□□□ 0.22
TRPA1-201ENST00000262209 CSPP1Q1MSJ5 1256 aa16.42■□□□□ 0.22
TRPA1-201ENST00000262209 TPM2P07951 284 aa16.41■□□□□ 0.22
TRPA1-201ENST00000262209 FRAT1Q92837 279 aaPredicted RBP16.41■□□□□ 0.22
TRPA1-201ENST00000262209 CCDC66A2RUB6 948 aa16.39■□□□□ 0.21
TRPA1-201ENST00000262209 MS4A1P11836 297 aa16.39■□□□□ 0.21
TRPA1-201ENST00000262209 NOC3LQ8WTT2 800 aaKnown RBP16.39■□□□□ 0.21
TRPA1-201ENST00000262209 WIZO95785 1651 aa16.38■□□□□ 0.21
TRPA1-201ENST00000262209 CHMP4BQ9H444 224 aaKnown RBP16.38■□□□□ 0.21
TRPA1-201ENST00000262209 TEX35Q5T0J7 233 aa16.37■□□□□ 0.21
TRPA1-201ENST00000262209 CFAP44Q96MT7 982 aa16.37■□□□□ 0.21
TRPA1-201ENST00000262209 BRPF3Q9ULD4 1205 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms