RNA–Protein interactions for RNA: ENST00000262059.8

CALCOCO1-201, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CALCOCO1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-201ENST00000262059 MRS2Q9HD23 443 aa14.28□□□□□ -0.12
CALCOCO1-201ENST00000262059 P3H3Q8IVL6 736 aa14.26□□□□□ -0.13
CALCOCO1-201ENST00000262059 ARID3AQ99856 593 aa14.25□□□□□ -0.13
CALCOCO1-201ENST00000262059 ZNF777Q9ULD5 760 aaPredicted RBP14.25□□□□□ -0.13
CALCOCO1-201ENST00000262059 HIRIP3Q9BW71 556 aaPredicted RBP14.24□□□□□ -0.13
CALCOCO1-201ENST00000262059 TMC1Q8TDI8 760 aa14.23□□□□□ -0.13
CALCOCO1-201ENST00000262059 TONSLQ96HA7 1378 aa14.23□□□□□ -0.13
CALCOCO1-201ENST00000262059 GOLGA6L22H0YM25 854 aa14.22□□□□□ -0.13
CALCOCO1-201ENST00000262059 ARID3CA6NKF2 412 aa14.22□□□□□ -0.13
CALCOCO1-201ENST00000262059 MYO15BQ96JP2 1530 aa14.21□□□□□ -0.13
CALCOCO1-201ENST00000262059 SENP3-EIF4A1A0A087X0R7 540 aa14.19□□□□□ -0.14
CALCOCO1-201ENST00000262059 TPRNQ4KMQ1 711 aa14.19□□□□□ -0.14
CALCOCO1-201ENST00000262059 VSIG10Q8N0Z9 540 aa14.18□□□□□ -0.14
CALCOCO1-201ENST00000262059 TSHZ2Q9NRE2 1034 aa14.17□□□□□ -0.14
CALCOCO1-201ENST00000262059 STAG3Q9UJ98 1225 aa14.17□□□□□ -0.14
CALCOCO1-201ENST00000262059 PPP4R2Q9NY27 417 aa14.16□□□□□ -0.14
CALCOCO1-201ENST00000262059 B4GALNT3Q6L9W6 998 aa14.15□□□□□ -0.14
CALCOCO1-201ENST00000262059 L1TD1Q5T7N2 865 aaKnown RBP14.12□□□□□ -0.15
CALCOCO1-201ENST00000262059 MSNP26038 577 aaKnown RBP14.12□□□□□ -0.15
CALCOCO1-201ENST00000262059 PLCB2Q00722 1185 aa14.12□□□□□ -0.15
CALCOCO1-201ENST00000262059 CHGAP10645 457 aaKnown RBP14.11□□□□□ -0.15
CALCOCO1-201ENST00000262059 ZBTB7CA1YPR0 619 aa14.11□□□□□ -0.15
CALCOCO1-201ENST00000262059 PNNQ9H307 717 aaKnown RBP14.1□□□□□ -0.15
CALCOCO1-201ENST00000262059 ZCCHC6Q5VYS8 1495 aaKnown RBP14.1□□□□□ -0.15
CALCOCO1-201ENST00000262059 PRKCSHP14314 528 aaPredicted RBP14.08□□□□□ -0.16
CALCOCO1-201ENST00000262059 CCDC180Q9P1Z9 1646 aa14.07□□□□□ -0.16
CALCOCO1-201ENST00000262059 HSP90AA2PQ14568 343 aaPredicted RBP14.07□□□□□ -0.16
CALCOCO1-201ENST00000262059 WDR43Q15061 677 aaKnown RBP eCLIP14.07□□□□□ -0.16
CALCOCO1-201ENST00000262059 RGS3P49796 1198 aa14.05□□□□□ -0.16
CALCOCO1-201ENST00000262059 TNNT3P45378 269 aaPredicted RBP14.03□□□□□ -0.16
CALCOCO1-201ENST00000262059 TIMELESSQ9UNS1 1208 aa14.02□□□□□ -0.16
CALCOCO1-201ENST00000262059 CHAF1AQ13111 956 aaPredicted RBP14.02□□□□□ -0.17
CALCOCO1-201ENST00000262059 SPRYD3Q8NCJ5 442 aa14.01□□□□□ -0.17
CALCOCO1-201ENST00000262059 A0A0G2JS52 829 aa14□□□□□ -0.17
CALCOCO1-201ENST00000262059 TRHP20396 242 aaPredicted RBP14□□□□□ -0.17
CALCOCO1-201ENST00000262059 RSPH6AQ9H0K4 717 aa14□□□□□ -0.17
CALCOCO1-201ENST00000262059 MYH16Q9H6N6 1097 aa13.99□□□□□ -0.17
CALCOCO1-201ENST00000262059 A0A0U1RQG5 324 aaPredicted RBP13.99□□□□□ -0.17
CALCOCO1-201ENST00000262059 GZF1Q9H116 711 aaPredicted RBP13.98□□□□□ -0.17
CALCOCO1-201ENST00000262059 HSP90AB1P08238 724 aaKnown RBP13.96□□□□□ -0.17
CALCOCO1-201ENST00000262059 ZRSR1Q15695 479 aaKnown RBP13.95□□□□□ -0.18
CALCOCO1-201ENST00000262059 SCRIBQ14160 1630 aa13.95□□□□□ -0.18
CALCOCO1-201ENST00000262059 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.95□□□□□ -0.181e-6■■■□□ 15.5
CALCOCO1-201ENST00000262059 CHIC2Q9UKJ5 165 aa13.95□□□□□ -0.18
CALCOCO1-201ENST00000262059 PKNOX2Q96KN3 472 aa13.94□□□□□ -0.18
CALCOCO1-201ENST00000262059 ANO8Q9HCE9 1232 aaPredicted RBP13.94□□□□□ -0.18
CALCOCO1-201ENST00000262059 TSPY4P0CV99 314 aa13.91□□□□□ -0.18
CALCOCO1-201ENST00000262059 TSPY10P0CW01 314 aa13.91□□□□□ -0.18
CALCOCO1-201ENST00000262059 KDM2AQ9Y2K7 1162 aa13.9□□□□□ -0.18
CALCOCO1-201ENST00000262059 EIF4G2P78344 907 aaKnown RBP eCLIP13.89□□□□□ -0.19
CALCOCO1-201ENST00000262059 C14orf37Q86TY3 774 aa13.89□□□□□ -0.19
CALCOCO1-201ENST00000262059 IPO9Q96P70 1041 aaKnown RBP13.89□□□□□ -0.19
CALCOCO1-201ENST00000262059 PODXL2Q9NZ53 605 aa13.89□□□□□ -0.19
CALCOCO1-201ENST00000262059 GOLGA6L3A6NEY3 463 aa13.87□□□□□ -0.19
CALCOCO1-201ENST00000262059 HSCBQ8IWL3 235 aa13.87□□□□□ -0.19
CALCOCO1-201ENST00000262059 GOLGA6L6A8MZA4 724 aa13.87□□□□□ -0.19
CALCOCO1-201ENST00000262059 SLKQ9H2G2 1235 aaPredicted RBP13.86□□□□□ -0.19
CALCOCO1-201ENST00000262059 MTUS2Q5JR59 1369 aa13.85□□□□□ -0.19
CALCOCO1-201ENST00000262059 DRC7Q8IY82 874 aa13.85□□□□□ -0.19
CALCOCO1-201ENST00000262059 CLIP1P30622 1438 aa13.85□□□□□ -0.19
CALCOCO1-201ENST00000262059 CEP162Q5TB80 1403 aa13.84□□□□□ -0.19
CALCOCO1-201ENST00000262059 CHMP7Q8WUX9 453 aaPredicted RBP13.84□□□□□ -0.19
CALCOCO1-201ENST00000262059 CASC1Q6TDU7 716 aa13.83□□□□□ -0.2
CALCOCO1-201ENST00000262059 HAP1P54257 671 aaPredicted RBP13.83□□□□□ -0.2
CALCOCO1-201ENST00000262059 KIAA2012Q0VF49 1180 aa13.82□□□□□ -0.2
CALCOCO1-201ENST00000262059 FTSJ3Q8IY81 847 aaKnown RBP13.8□□□□□ -0.2
CALCOCO1-201ENST00000262059 NRDCO43847 1150 aa13.8□□□□□ -0.2
CALCOCO1-201ENST00000262059 PLEKHG5O94827 1062 aa13.79□□□□□ -0.2
CALCOCO1-201ENST00000262059 FRAT1Q92837 279 aaPredicted RBP13.78□□□□□ -0.2
CALCOCO1-201ENST00000262059 GSE1Q14687 1217 aa13.77□□□□□ -0.21
CALCOCO1-201ENST00000262059 CFAP53Q96M91 514 aa13.77□□□□□ -0.21
CALCOCO1-201ENST00000262059 TAOK2Q9UL54 1235 aa13.76□□□□□ -0.21
CALCOCO1-201ENST00000262059 GOLGA3Q08378 1498 aa13.75□□□□□ -0.21
CALCOCO1-201ENST00000262059 GBP4Q96PP9 640 aa13.74□□□□□ -0.21
CALCOCO1-201ENST00000262059 CDCA8Q53HL2 280 aa13.74□□□□□ -0.21
CALCOCO1-201ENST00000262059 RSF1Q96T23 1441 aaPredicted RBP13.73□□□□□ -0.21
CALCOCO1-201ENST00000262059 ZNF771Q7L3S4 317 aaPredicted RBP13.73□□□□□ -0.21
CALCOCO1-201ENST00000262059 RRP7BPQ9NSQ0 103 aa13.73□□□□□ -0.21
CALCOCO1-201ENST00000262059 NEUROD2Q15784 382 aa13.72□□□□□ -0.21
CALCOCO1-201ENST00000262059 GOLGA6L4A6NEF3 574 aa13.72□□□□□ -0.21
CALCOCO1-201ENST00000262059 PPP1R15AO75807 674 aaPredicted RBP13.72□□□□□ -0.21
CALCOCO1-201ENST00000262059 AEBP2Q6ZN18 517 aaPredicted RBP13.72□□□□□ -0.21
CALCOCO1-201ENST00000262059 USP35Q9P2H5 1018 aa13.72□□□□□ -0.21
CALCOCO1-201ENST00000262059 EEA1Q15075 1411 aa13.72□□□□□ -0.21
CALCOCO1-201ENST00000262059 TCERG1O14776 1098 aaKnown RBP13.71□□□□□ -0.21
CALCOCO1-201ENST00000262059 RB1CC1Q8TDY2 1594 aa13.71□□□□□ -0.22
CALCOCO1-201ENST00000262059 FAM13BQ9NYF5 915 aa13.7□□□□□ -0.22
CALCOCO1-201ENST00000262059 KNSTRNQ9Y448 316 aa13.7□□□□□ -0.22
CALCOCO1-201ENST00000262059 TNIKQ9UKE5 1360 aa13.69□□□□□ -0.22
CALCOCO1-201ENST00000262059 TULP1O00294 542 aaPredicted RBP13.69□□□□□ -0.22
CALCOCO1-201ENST00000262059 SLC4A3P48751 1232 aa13.68□□□□□ -0.22
CALCOCO1-201ENST00000262059 PTMSP20962 102 aa13.67□□□□□ -0.22
CALCOCO1-201ENST00000262059 CCER2I3L3R5 266 aa13.67□□□□□ -0.22
CALCOCO1-201ENST00000262059 KCNH8Q96L42 1107 aa13.66□□□□□ -0.22
CALCOCO1-201ENST00000262059 SIN3AQ96ST3 1273 aa13.66□□□□□ -0.22
CALCOCO1-201ENST00000262059 IL27Q8NEV9 243 aa13.66□□□□□ -0.22
CALCOCO1-201ENST00000262059 SENP3Q9H4L4 574 aaPredicted RBP13.66□□□□□ -0.22
CALCOCO1-201ENST00000262059 FANCIQ9NVI1 1328 aa13.65□□□□□ -0.22
CALCOCO1-201ENST00000262059 CHMP4BQ9H444 224 aaKnown RBP13.65□□□□□ -0.22
CALCOCO1-201ENST00000262059 PLEKHD1A6NEE1 506 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms