RNA–Protein interactions for RNA: ENST00000261609.11

HERC2-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC2, Length 15,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-201ENST00000261609 L1TD1Q5T7N2 865 aaKnown RBP9.44□□□□□ -0.9
HERC2-201ENST00000261609 ARID4BQ4LE39 1312 aaPredicted RBP9.42□□□□□ -0.9
HERC2-201ENST00000261609 RSPH6AQ9H0K4 717 aa9.41□□□□□ -0.9
HERC2-201ENST00000261609 B4GALNT3Q6L9W6 998 aa9.41□□□□□ -0.9
HERC2-201ENST00000261609 CCDC180Q9P1Z9 1646 aa9.4□□□□□ -0.9
HERC2-201ENST00000261609 VSIG10Q8N0Z9 540 aa9.4□□□□□ -0.9
HERC2-201ENST00000261609 HSP90AA2PQ14568 343 aaPredicted RBP9.39□□□□□ -0.91
HERC2-201ENST00000261609 WDR43Q15061 677 aaKnown RBP eCLIP9.38□□□□□ -0.91
HERC2-201ENST00000261609 PNNQ9H307 717 aaKnown RBP9.38□□□□□ -0.91
HERC2-201ENST00000261609 MYH16Q9H6N6 1097 aa9.38□□□□□ -0.91
HERC2-201ENST00000261609 HIRIP3Q9BW71 556 aaPredicted RBP9.37□□□□□ -0.91
HERC2-201ENST00000261609 P3H3Q8IVL6 736 aa9.36□□□□□ -0.91
HERC2-201ENST00000261609 TNNT3P45378 269 aaPredicted RBP9.34□□□□□ -0.91
HERC2-201ENST00000261609 MSNP26038 577 aaKnown RBP9.33□□□□□ -0.92
HERC2-201ENST00000261609 ZNF777Q9ULD5 760 aaPredicted RBP9.33□□□□□ -0.92
HERC2-201ENST00000261609 CHAF1AQ13111 956 aaPredicted RBP9.32□□□□□ -0.92
HERC2-201ENST00000261609 ARID3AQ99856 593 aa9.31□□□□□ -0.92
HERC2-201ENST00000261609 ARID3CA6NKF2 412 aa9.3□□□□□ -0.92
HERC2-201ENST00000261609 TPRNQ4KMQ1 711 aa9.3□□□□□ -0.92
HERC2-201ENST00000261609 EIF4G2P78344 907 aaKnown RBP eCLIP9.29□□□□□ -0.923e-7■■■■□ 25.7
HERC2-201ENST00000261609 PLCB2Q00722 1185 aa9.29□□□□□ -0.92
HERC2-201ENST00000261609 IPO9Q96P70 1041 aaKnown RBP9.29□□□□□ -0.92
HERC2-201ENST00000261609 CASC1Q6TDU7 716 aa9.27□□□□□ -0.92
HERC2-201ENST00000261609 PABPN1Q86U42 306 aaKnown RBP eCLIP9.27□□□□□ -0.93
HERC2-201ENST00000261609 SENP3-EIF4A1A0A087X0R7 540 aa9.27□□□□□ -0.93
HERC2-201ENST00000261609 GZF1Q9H116 711 aaPredicted RBP9.26□□□□□ -0.93
HERC2-201ENST00000261609 TIMELESSQ9UNS1 1208 aa9.26□□□□□ -0.93
HERC2-201ENST00000261609 ANO8Q9HCE9 1232 aaPredicted RBP9.26□□□□□ -0.93
HERC2-201ENST00000261609 HSP90AB1P08238 724 aaKnown RBP9.26□□□□□ -0.93
HERC2-201ENST00000261609 SPRYD3Q8NCJ5 442 aa9.25□□□□□ -0.93
HERC2-201ENST00000261609 RGS3P49796 1198 aa9.25□□□□□ -0.93
HERC2-201ENST00000261609 FBLN2P98095 1184 aa9.25□□□□□ -0.93
HERC2-201ENST00000261609 GOLGA6L3A6NEY3 463 aa9.24□□□□□ -0.93
HERC2-201ENST00000261609 ZRSR1Q15695 479 aaKnown RBP9.24□□□□□ -0.93
HERC2-201ENST00000261609 PKNOX2Q96KN3 472 aa9.23□□□□□ -0.93
HERC2-201ENST00000261609 USP35Q9P2H5 1018 aa9.23□□□□□ -0.93
HERC2-201ENST00000261609 GOLGA6L6A8MZA4 724 aa9.22□□□□□ -0.93
HERC2-201ENST00000261609 CHIC2Q9UKJ5 165 aa9.22□□□□□ -0.93
HERC2-201ENST00000261609 CLIP1P30622 1438 aa9.22□□□□□ -0.93
HERC2-201ENST00000261609 PODXL2Q9NZ53 605 aa9.21□□□□□ -0.93
HERC2-201ENST00000261609 KIAA2012Q0VF49 1180 aa9.21□□□□□ -0.94
HERC2-201ENST00000261609 HSCBQ8IWL3 235 aa9.21□□□□□ -0.94
HERC2-201ENST00000261609 A0A0U1RQG5 324 aaPredicted RBP9.21□□□□□ -0.94
HERC2-201ENST00000261609 FTSJ3Q8IY81 847 aaKnown RBP9.21□□□□□ -0.94
HERC2-201ENST00000261609 KDM2AQ9Y2K7 1162 aa9.2□□□□□ -0.94
HERC2-201ENST00000261609 MYO15BQ96JP2 1530 aa9.2□□□□□ -0.94
HERC2-201ENST00000261609 CHGAP10645 457 aaKnown RBP9.2□□□□□ -0.94
HERC2-201ENST00000261609 ZBTB7CA1YPR0 619 aa9.2□□□□□ -0.94
HERC2-201ENST00000261609 TCERG1O14776 1098 aaKnown RBP9.2□□□□□ -0.94
HERC2-201ENST00000261609 NRDCO43847 1150 aa9.2□□□□□ -0.94
HERC2-201ENST00000261609 DRC7Q8IY82 874 aa9.2□□□□□ -0.94
HERC2-201ENST00000261609 STAG3Q9UJ98 1225 aa9.19□□□□□ -0.94
HERC2-201ENST00000261609 PTMSP20962 102 aa9.19□□□□□ -0.94
HERC2-201ENST00000261609 CCER2I3L3R5 266 aa9.17□□□□□ -0.94
HERC2-201ENST00000261609 GBP4Q96PP9 640 aa9.17□□□□□ -0.94
HERC2-201ENST00000261609 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.17□□□□□ -0.942e-7■■■■□ 22.7
HERC2-201ENST00000261609 CDCA8Q53HL2 280 aa9.16□□□□□ -0.94
HERC2-201ENST00000261609 GSE1Q14687 1217 aa9.16□□□□□ -0.94
HERC2-201ENST00000261609 CHMP4BQ9H444 224 aaKnown RBP9.16□□□□□ -0.94
HERC2-201ENST00000261609 FANCIQ9NVI1 1328 aa9.16□□□□□ -0.94
HERC2-201ENST00000261609 MTUS2Q5JR59 1369 aa9.16□□□□□ -0.94
HERC2-201ENST00000261609 KNSTRNQ9Y448 316 aa9.15□□□□□ -0.94
HERC2-201ENST00000261609 CEP162Q5TB80 1403 aa9.14□□□□□ -0.95
HERC2-201ENST00000261609 CFAP53Q96M91 514 aa9.14□□□□□ -0.95
HERC2-201ENST00000261609 MS4A1P11836 297 aa9.14□□□□□ -0.95
HERC2-201ENST00000261609 ESF1Q9H501 851 aaKnown RBP9.14□□□□□ -0.95
HERC2-201ENST00000261609 RRP7BPQ9NSQ0 103 aa9.14□□□□□ -0.95
HERC2-201ENST00000261609 SLKQ9H2G2 1235 aaPredicted RBP9.13□□□□□ -0.95
HERC2-201ENST00000261609 TSPY4P0CV99 314 aa9.13□□□□□ -0.95
HERC2-201ENST00000261609 TSPY10P0CW01 314 aa9.13□□□□□ -0.95
HERC2-201ENST00000261609 FAM13BQ9NYF5 915 aa9.13□□□□□ -0.95
HERC2-201ENST00000261609 EEA1Q15075 1411 aa9.12□□□□□ -0.95
HERC2-201ENST00000261609 GOLGA3Q08378 1498 aa9.12□□□□□ -0.95
HERC2-201ENST00000261609 ABCC9O60706 1549 aa9.11□□□□□ -0.95
HERC2-201ENST00000261609 GOLGA6L4A6NEF3 574 aa9.11□□□□□ -0.95
HERC2-201ENST00000261609 RSF1Q96T23 1441 aaPredicted RBP9.1□□□□□ -0.95
HERC2-201ENST00000261609 SCRIBQ14160 1630 aa9.1□□□□□ -0.95
HERC2-201ENST00000261609 ZNF771Q7L3S4 317 aaPredicted RBP9.1□□□□□ -0.95
HERC2-201ENST00000261609 FRAT1Q92837 279 aaPredicted RBP9.09□□□□□ -0.95
HERC2-201ENST00000261609 CFAP44Q96MT7 982 aa9.08□□□□□ -0.96
HERC2-201ENST00000261609 CARD11Q9BXL7 1154 aa9.08□□□□□ -0.96
HERC2-201ENST00000261609 TNIKQ9UKE5 1360 aa9.07□□□□□ -0.96
HERC2-201ENST00000261609 RCAN3Q9UKA8 241 aa9.07□□□□□ -0.96
HERC2-201ENST00000261609 APPP05067 770 aa9.07□□□□□ -0.96
HERC2-201ENST00000261609 GOLGA6L1Q8N7Z2 621 aa9.07□□□□□ -0.96
HERC2-201ENST00000261609 FAM43AQ8N2R8 423 aa9.07□□□□□ -0.96
HERC2-201ENST00000261609 MCCP23508 829 aa9.06□□□□□ -0.96
HERC2-201ENST00000261609 ZCCHC6Q5VYS8 1495 aaKnown RBP9.06□□□□□ -0.96
HERC2-201ENST00000261609 SLC4A3P48751 1232 aa9.05□□□□□ -0.96
HERC2-201ENST00000261609 CALD1Q05682 793 aaKnown RBP9.05□□□□□ -0.96
HERC2-201ENST00000261609 NUDCQ9Y266 331 aa9.05□□□□□ -0.96
HERC2-201ENST00000261609 SYAP1Q96A49 352 aaPredicted RBP9.04□□□□□ -0.96
HERC2-201ENST00000261609 IL27Q8NEV9 243 aa9.04□□□□□ -0.96
HERC2-201ENST00000261609 SETQ01105 290 aaPredicted RBP9.04□□□□□ -0.96
HERC2-201ENST00000261609 SIN3AQ96ST3 1273 aa9.04□□□□□ -0.96
HERC2-201ENST00000261609 MAPK8IP3Q9UPT6 1336 aa9.04□□□□□ -0.96
HERC2-201ENST00000261609 FGD1P98174 961 aa9.04□□□□□ -0.96
HERC2-201ENST00000261609 BRPF3Q9ULD4 1205 aa9.02□□□□□ -0.97
HERC2-201ENST00000261609 PDE4AP27815 886 aa9.02□□□□□ -0.97
HERC2-201ENST00000261609 KCNJ4P48050 445 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms