RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 CARMIL1Q5VZK9 1371 aa27.94■■■□□ 2.06
SSB-201ENST00000260956 CLASP1Q7Z460 1538 aa27.89■■■□□ 2.06
SSB-201ENST00000260956 NUP160Q12769 1436 aa27.89■■■□□ 2.06
SSB-201ENST00000260956 CEP170Q5SW79 1584 aa27.89■■■□□ 2.06
SSB-201ENST00000260956 CUL7Q14999 1698 aa27.88■■■□□ 2.05
SSB-201ENST00000260956 RAPGEF2Q9Y4G8 1499 aa27.79■■■□□ 2.04
SSB-201ENST00000260956 PRXQ9BXM0 1461 aa27.77■■■□□ 2.04
SSB-201ENST00000260956 ARHGEF11O15085 1522 aa27.76■■■□□ 2.03
SSB-201ENST00000260956 RIMBP3CA6NJZ7 1639 aa27.72■■■□□ 2.03
SSB-201ENST00000260956 RIMBP3BA6NNM3 1639 aa27.72■■■□□ 2.03
SSB-201ENST00000260956 RIMBP3Q9UFD9 1639 aa27.72■■■□□ 2.03
SSB-201ENST00000260956 UBTFP17480 764 aaKnown RBP27.67■■■□□ 2.02
SSB-201ENST00000260956 KIAA0586Q9BVV6 1533 aa27.65■■■□□ 2.02
SSB-201ENST00000260956 JPH4Q96JJ6 628 aa27.65■■■□□ 2.02
SSB-201ENST00000260956 ERCC6L2Q5T890 1561 aa27.64■■■□□ 2.02
SSB-201ENST00000260956 SHROOM2Q13796 1616 aa27.62■■■□□ 2.01
SSB-201ENST00000260956 CLIP1P30622 1438 aa27.6■■■□□ 2.01
SSB-201ENST00000260956 ARAP1Q96P48 1450 aa27.58■■■□□ 2.01
SSB-201ENST00000260956 CYB5RLQ6IPT4 315 aa27.56■■■□□ 2
SSB-201ENST00000260956 PRG4Q92954 1404 aaPredicted RBP27.55■■■□□ 2
SSB-201ENST00000260956 VPS8Q8N3P4 1428 aa27.5■■□□□ 1.99
SSB-201ENST00000260956 IQGAP2Q13576 1575 aa27.49■■□□□ 1.99
SSB-201ENST00000260956 PPARGC1BQ86YN6 1023 aaKnown RBP27.48■■□□□ 1.99
SSB-201ENST00000260956 CTTNBP2Q8WZ74 1663 aa27.39■■□□□ 1.97
SSB-201ENST00000260956 DISP1Q96F81 1524 aa27.38■■□□□ 1.97
SSB-201ENST00000260956 UGGT2Q9NYU1 1516 aa27.37■■□□□ 1.97
SSB-201ENST00000260956 CARMIL2Q6F5E8 1435 aa27.29■■□□□ 1.96
SSB-201ENST00000260956 TTBK1Q5TCY1 1321 aaPredicted RBP27.28■■□□□ 1.96
SSB-201ENST00000260956 RANGAP1P46060 587 aaPredicted RBP27.27■■□□□ 1.96
SSB-201ENST00000260956 KIAA0556O60303 1618 aa27.24■■□□□ 1.95
SSB-201ENST00000260956 PTPRGP23470 1445 aa27.23■■□□□ 1.95
SSB-201ENST00000260956 ARHGAP35Q9NRY4 1499 aa27.23■■□□□ 1.95
SSB-201ENST00000260956 ZEB1P37275 1124 aaPredicted RBP27.23■■□□□ 1.95
SSB-201ENST00000260956 P3H3Q8IVL6 736 aa27.21■■□□□ 1.95
SSB-201ENST00000260956 SAMD9Q5K651 1589 aa27.13■■□□□ 1.93
SSB-201ENST00000260956 ADCY10Q96PN6 1610 aa27.11■■□□□ 1.93
SSB-201ENST00000260956 FHOD3Q2V2M9 1422 aa27.05■■□□□ 1.92
SSB-201ENST00000260956 PLB1Q6P1J6 1458 aa27.05■■□□□ 1.92
SSB-201ENST00000260956 UACAQ9BZF9 1416 aa27.04■■□□□ 1.92
SSB-201ENST00000260956 UHRF1BP1LA0JNW5 1464 aa26.98■■□□□ 1.91
SSB-201ENST00000260956 EFCAB5A4FU69 1503 aa26.98■■□□□ 1.91
SSB-201ENST00000260956 ABCC2Q92887 1545 aa26.97■■□□□ 1.91
SSB-201ENST00000260956 MAP3K1Q13233 1512 aa26.96■■□□□ 1.91
SSB-201ENST00000260956 ABCA8O94911 1581 aa26.96■■□□□ 1.91
SSB-201ENST00000260956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.92■■□□□ 1.9
SSB-201ENST00000260956 NPM1P06748 294 aaKnown RBP eCLIP26.91■■□□□ 1.9
SSB-201ENST00000260956 KDM5BQ9UGL1 1544 aa26.89■■□□□ 1.89
SSB-201ENST00000260956 APLP2Q06481 763 aa26.88■■□□□ 1.89
SSB-201ENST00000260956 TIAM1Q13009 1591 aa26.88■■□□□ 1.89
SSB-201ENST00000260956 ARID3CA6NKF2 412 aa26.87■■□□□ 1.89
SSB-201ENST00000260956 TRHP20396 242 aaPredicted RBP26.87■■□□□ 1.89
SSB-201ENST00000260956 CFAP43Q8NDM7 1665 aa26.85■■□□□ 1.89
SSB-201ENST00000260956 KANK4Q5T7N3 995 aaPredicted RBP26.85■■□□□ 1.89
SSB-201ENST00000260956 MAPKBP1O60336 1514 aa26.84■■□□□ 1.89
SSB-201ENST00000260956 RRBP1Q9P2E9 1410 aaKnown RBP26.84■■□□□ 1.89
SSB-201ENST00000260956 PCF11O94913 1555 aaKnown RBP26.84■■□□□ 1.89
SSB-201ENST00000260956 ZCCHC11Q5TAX3 1644 aaKnown RBP26.8■■□□□ 1.88
SSB-201ENST00000260956 RAPGEF6Q8TEU7 1601 aa26.8■■□□□ 1.88
SSB-201ENST00000260956 NUP153P49790 1475 aaKnown RBP26.8■■□□□ 1.88
SSB-201ENST00000260956 CCER1Q8TC90 406 aaPredicted RBP26.79■■□□□ 1.88
SSB-201ENST00000260956 ASXL2Q76L83 1435 aa26.79■■□□□ 1.88
SSB-201ENST00000260956 ATP10BO94823 1461 aa26.79■■□□□ 1.88
SSB-201ENST00000260956 FMN1Q68DA7 1419 aa26.75■■□□□ 1.87
SSB-201ENST00000260956 ABCC10Q5T3U5 1492 aa26.73■■□□□ 1.87
SSB-201ENST00000260956 FYCO1Q9BQS8 1478 aa26.72■■□□□ 1.87
SSB-201ENST00000260956 FAM69CQ0P6D2 419 aa26.7■■□□□ 1.87
SSB-201ENST00000260956 LRRC9Q6ZRR7 1453 aa26.69■■□□□ 1.86
SSB-201ENST00000260956 CASKIN1Q8WXD9 1431 aa26.68■■□□□ 1.86
SSB-201ENST00000260956 ATP1B4Q9UN42 357 aaPredicted RBP26.68■■□□□ 1.86
SSB-201ENST00000260956 DIP2BQ9P265 1576 aa26.67■■□□□ 1.86
SSB-201ENST00000260956 KIF13AQ9H1H9 1805 aa26.67■■□□□ 1.86
SSB-201ENST00000260956 WDR7Q9Y4E6 1490 aa26.64■■□□□ 1.86
SSB-201ENST00000260956 CDK13Q14004 1512 aaKnown RBP26.64■■□□□ 1.86
SSB-201ENST00000260956 HNRNPUL2Q1KMD3 747 aaKnown RBP26.64■■□□□ 1.85
SSB-201ENST00000260956 EPRSP07814 1512 aaKnown RBP26.62■■□□□ 1.85
SSB-201ENST00000260956 KCNH8Q96L42 1107 aa26.62■■□□□ 1.85
SSB-201ENST00000260956 CCNB3Q8WWL7 1395 aa26.59■■□□□ 1.85
SSB-201ENST00000260956 LRRIQ1Q96JM4 1722 aa26.58■■□□□ 1.85
SSB-201ENST00000260956 HECW1Q76N89 1606 aa26.57■■□□□ 1.84
SSB-201ENST00000260956 GLI2P10070 1586 aa26.53■■□□□ 1.84
SSB-201ENST00000260956 PLEKHD1A6NEE1 506 aa26.51■■□□□ 1.83
SSB-201ENST00000260956 PHLDB1Q86UU1 1377 aa26.5■■□□□ 1.83
SSB-201ENST00000260956 MAP3K4Q9Y6R4 1608 aa26.43■■□□□ 1.82
SSB-201ENST00000260956 TSPOAP1O95153 1857 aa26.43■■□□□ 1.82
SSB-201ENST00000260956 MAGI3Q5TCQ9 1506 aa26.42■■□□□ 1.82
SSB-201ENST00000260956 PPRC1Q5VV67 1664 aaKnown RBP26.42■■□□□ 1.82
SSB-201ENST00000260956 DHX57Q6P158 1386 aaKnown RBP26.41■■□□□ 1.82
SSB-201ENST00000260956 CCDC18Q5T9S5 1454 aa26.41■■□□□ 1.82
SSB-201ENST00000260956 CD109Q6YHK3 1445 aa26.4■■□□□ 1.82
SSB-201ENST00000260956 CDK11AQ9UQ88 783 aaPredicted RBP26.38■■□□□ 1.81
SSB-201ENST00000260956 TROQ12816 1431 aaPredicted RBP26.37■■□□□ 1.81
SSB-201ENST00000260956 ABCA9Q8IUA7 1624 aa26.36■■□□□ 1.81
SSB-201ENST00000260956 CLSPNQ9HAW4 1339 aa26.36■■□□□ 1.81
SSB-201ENST00000260956 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.36■■□□□ 1.812e-20■□□□□ 9
SSB-201ENST00000260956 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.35■■□□□ 1.81
SSB-201ENST00000260956 KIF14Q15058 1648 aa26.33■■□□□ 1.81
SSB-201ENST00000260956 TTC37Q6PGP7 1564 aa26.32■■□□□ 1.8
SSB-201ENST00000260956 EHBP1L1Q8N3D4 1523 aa26.31■■□□□ 1.8
SSB-201ENST00000260956 COL17A1Q9UMD9 1497 aaPredicted RBP26.28■■□□□ 1.8
SSB-201ENST00000260956 FGD6Q6ZV73 1430 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms