RNA–Protein interactions for RNA: ENST00000260926.9

SATB2-201, Transcript of SATB homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SATB2, Length 5,318 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2-201ENST00000260926 HNRNPUQ00839 825 aaKnown RBP eCLIP18.17■□□□□ 0.5
SATB2-201ENST00000260926 KIF27Q86VH2 1401 aa18.16■□□□□ 0.5
SATB2-201ENST00000260926 TSPY4P0CV99 314 aa18.16■□□□□ 0.5
SATB2-201ENST00000260926 TSPY10P0CW01 314 aa18.16■□□□□ 0.5
SATB2-201ENST00000260926 ERICH6BQ5W0A0 696 aa18.15■□□□□ 0.5
SATB2-201ENST00000260926 RTN4Q9NQC3 1192 aaKnown RBP18.15■□□□□ 0.5
SATB2-201ENST00000260926 SALL2Q9Y467 1007 aaPredicted RBP18.14■□□□□ 0.49
SATB2-201ENST00000260926 NPM1P06748 294 aaKnown RBP eCLIP18.13■□□□□ 0.49
SATB2-201ENST00000260926 FKBP8Q14318 412 aa18.12■□□□□ 0.49
SATB2-201ENST00000260926 CEP164Q9UPV0 1460 aa18.12■□□□□ 0.49
SATB2-201ENST00000260926 NAP1L5Q96NT1 182 aaPredicted RBP18.12■□□□□ 0.49
SATB2-201ENST00000260926 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
SATB2-201ENST00000260926 KCNH8Q96L42 1107 aa18.1■□□□□ 0.49
SATB2-201ENST00000260926 SCAF1Q9H7N4 1312 aaKnown RBP18.08■□□□□ 0.48
SATB2-201ENST00000260926 CANXP27824 592 aaKnown RBP18.07■□□□□ 0.48
SATB2-201ENST00000260926 CCDC88BA6NC98 1476 aa18.06■□□□□ 0.48
SATB2-201ENST00000260926 HSP90AA1P07900 732 aaKnown RBP18.06■□□□□ 0.48
SATB2-201ENST00000260926 SLC24A1O60721 1099 aa18.06■□□□□ 0.48
SATB2-201ENST00000260926 ABCC8Q09428 1581 aa18.06■□□□□ 0.48
SATB2-201ENST00000260926 SENP3Q9H4L4 574 aaPredicted RBP18.04■□□□□ 0.48
SATB2-201ENST00000260926 STAG3Q9UJ98 1225 aa18.02■□□□□ 0.48
SATB2-201ENST00000260926 PLEKHD1A6NEE1 506 aa18.01■□□□□ 0.47
SATB2-201ENST00000260926 ESF1Q9H501 851 aaKnown RBP18.01■□□□□ 0.47
SATB2-201ENST00000260926 SIN3AQ96ST3 1273 aa18■□□□□ 0.47
SATB2-201ENST00000260926 MRS2Q9HD23 443 aa17.98■□□□□ 0.47
SATB2-201ENST00000260926 NEFMP07197 916 aa17.98■□□□□ 0.47
SATB2-201ENST00000260926 CUX2O14529 1486 aa17.98■□□□□ 0.47
SATB2-201ENST00000260926 TMC1Q8TDI8 760 aa17.97■□□□□ 0.47
SATB2-201ENST00000260926 SENP3-EIF4A1A0A087X0R7 540 aa17.96■□□□□ 0.47
SATB2-201ENST00000260926 RGL3Q3MIN7 710 aa17.96■□□□□ 0.47
SATB2-201ENST00000260926 CFDP1Q9UEE9 299 aaPredicted RBP17.96■□□□□ 0.47
SATB2-201ENST00000260926 CARMIL1Q5VZK9 1371 aa17.96■□□□□ 0.47
SATB2-201ENST00000260926 EIF4G2P78344 907 aaKnown RBP eCLIP17.95■□□□□ 0.466e-6■■■■□ 25.1
SATB2-201ENST00000260926 UPF2Q9HAU5 1272 aaKnown RBP17.95■□□□□ 0.46
SATB2-201ENST00000260926 IRX6P78412 446 aaPredicted RBP17.93■□□□□ 0.46
SATB2-201ENST00000260926 KANK4Q5T7N3 995 aaPredicted RBP17.91■□□□□ 0.46
SATB2-201ENST00000260926 WIZO95785 1651 aa17.9■□□□□ 0.46
SATB2-201ENST00000260926 CCNB3Q8WWL7 1395 aa17.86■□□□□ 0.45
SATB2-201ENST00000260926 ERCC6Q03468 1493 aa17.85■□□□□ 0.45
SATB2-201ENST00000260926 DNTTIP2Q5QJE6 756 aaKnown RBP17.83■□□□□ 0.44
SATB2-201ENST00000260926 TDRD9Q8NDG6 1382 aaKnown RBP17.82■□□□□ 0.44
SATB2-201ENST00000260926 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.81■□□□□ 0.44
SATB2-201ENST00000260926 VPS8Q8N3P4 1428 aa17.8■□□□□ 0.44
SATB2-201ENST00000260926 EIF4G1Q04637 1599 aaKnown RBP17.79■□□□□ 0.44
SATB2-201ENST00000260926 TNNT3P45378 269 aaPredicted RBP17.77■□□□□ 0.43
SATB2-201ENST00000260926 WDR43Q15061 677 aaKnown RBP eCLIP17.77■□□□□ 0.43
SATB2-201ENST00000260926 CCDC136Q96JN2 1154 aa17.76■□□□□ 0.43
SATB2-201ENST00000260926 FHAD1B1AJZ9 1412 aa17.76■□□□□ 0.43
SATB2-201ENST00000260926 DEKP35659 375 aaKnown RBP17.74■□□□□ 0.43
SATB2-201ENST00000260926 SMARCA2P51531 1590 aa17.74■□□□□ 0.43
SATB2-201ENST00000260926 TOP2AP11388 1531 aaKnown RBP17.73■□□□□ 0.43
SATB2-201ENST00000260926 CARD11Q9BXL7 1154 aa17.73■□□□□ 0.43
SATB2-201ENST00000260926 PTMAP06454 111 aaKnown RBP17.72■□□□□ 0.43
SATB2-201ENST00000260926 RUSC2Q8N2Y8 1516 aa17.71■□□□□ 0.43
SATB2-201ENST00000260926 PPM1GO15355 546 aaPredicted RBP17.71■□□□□ 0.43
SATB2-201ENST00000260926 DDRGK1Q96HY6 314 aa17.7■□□□□ 0.42
SATB2-201ENST00000260926 FOXD1Q16676 465 aa17.7■□□□□ 0.42
SATB2-201ENST00000260926 ATAD2BQ9ULI0 1458 aa17.67■□□□□ 0.42
SATB2-201ENST00000260926 VSIG10Q8N0Z9 540 aa17.67■□□□□ 0.42
SATB2-201ENST00000260926 PLEKHG5O94827 1062 aa17.67■□□□□ 0.42
SATB2-201ENST00000260926 PODXL2Q9NZ53 605 aa17.65■□□□□ 0.42
SATB2-201ENST00000260926 CALRP27797 417 aaKnown RBP17.65■□□□□ 0.42
SATB2-201ENST00000260926 RAPGEF2Q9Y4G8 1499 aa17.65■□□□□ 0.42
SATB2-201ENST00000260926 CADPSQ9ULU8 1353 aa17.64■□□□□ 0.41
SATB2-201ENST00000260926 ARID4BQ4LE39 1312 aaPredicted RBP17.63■□□□□ 0.41
SATB2-201ENST00000260926 PPP1R15AO75807 674 aaPredicted RBP17.62■□□□□ 0.41
SATB2-201ENST00000260926 SUPT16HQ9Y5B9 1047 aaKnown RBP17.62■□□□□ 0.41
SATB2-201ENST00000260926 SETD5Q9C0A6 1442 aa17.6■□□□□ 0.41
SATB2-201ENST00000260926 DCAF11Q8TEB1 546 aa17.6■□□□□ 0.41
SATB2-201ENST00000260926 PDS5BQ9NTI5 1447 aa17.6■□□□□ 0.41
SATB2-201ENST00000260926 GOLGA6L22H0YM25 854 aa17.59■□□□□ 0.41
SATB2-201ENST00000260926 BECN1Q14457 450 aa17.59■□□□□ 0.41
SATB2-201ENST00000260926 PTMSP20962 102 aa17.59■□□□□ 0.41
SATB2-201ENST00000260926 RAB3GAP2Q9H2M9 1393 aa17.58■□□□□ 0.41
SATB2-201ENST00000260926 FHOD3Q2V2M9 1422 aa17.58■□□□□ 0.4
SATB2-201ENST00000260926 SMARCA4P51532 1647 aa17.58■□□□□ 0.4
SATB2-201ENST00000260926 ARHGAP35Q9NRY4 1499 aa17.57■□□□□ 0.4
SATB2-201ENST00000260926 KNSTRNQ9Y448 316 aa17.57■□□□□ 0.4
SATB2-201ENST00000260926 A0A0U1RQG5 324 aaPredicted RBP17.56■□□□□ 0.4
SATB2-201ENST00000260926 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.56■□□□□ 0.4
SATB2-201ENST00000260926 PRKCSHP14314 528 aaPredicted RBP17.55■□□□□ 0.4
SATB2-201ENST00000260926 PKD2Q13563 968 aa17.54■□□□□ 0.4
SATB2-201ENST00000260926 NOP58Q9Y2X3 529 aaKnown RBP17.53■□□□□ 0.4
SATB2-201ENST00000260926 NEUROD2Q15784 382 aa17.53■□□□□ 0.4
SATB2-201ENST00000260926 CC2D1BQ5T0F9 858 aaKnown RBP17.52■□□□□ 0.4
SATB2-201ENST00000260926 HSPA5P11021 654 aaKnown RBP17.51■□□□□ 0.39
SATB2-201ENST00000260926 HSP90AA2PQ14568 343 aaPredicted RBP17.5■□□□□ 0.39
SATB2-201ENST00000260926 ZBTB7CA1YPR0 619 aa17.5■□□□□ 0.39
SATB2-201ENST00000260926 C14orf37Q86TY3 774 aa17.5■□□□□ 0.39
SATB2-201ENST00000260926 LAS1LQ9Y4W2 734 aaKnown RBP17.5■□□□□ 0.39
SATB2-201ENST00000260926 FMN1Q68DA7 1419 aa17.49■□□□□ 0.39
SATB2-201ENST00000260926 CHAF1AQ13111 956 aaPredicted RBP17.48■□□□□ 0.39
SATB2-201ENST00000260926 PKNOX2Q96KN3 472 aa17.48■□□□□ 0.39
SATB2-201ENST00000260926 PNNQ9H307 717 aaKnown RBP17.48■□□□□ 0.39
SATB2-201ENST00000260926 MPHOSPH9Q99550 1183 aa17.47■□□□□ 0.39
SATB2-201ENST00000260926 MSNP26038 577 aaKnown RBP17.47■□□□□ 0.39
SATB2-201ENST00000260926 CDCA8Q53HL2 280 aa17.46■□□□□ 0.39
SATB2-201ENST00000260926 TIMELESSQ9UNS1 1208 aa17.46■□□□□ 0.39
SATB2-201ENST00000260926 ARID3AQ99856 593 aa17.45■□□□□ 0.38
SATB2-201ENST00000260926 MLECQ14165 292 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms