RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 RUSC2Q8N2Y8 1516 aa29.38■■■□□ 2.29
CGREF1-201ENST00000260595 CUL7Q14999 1698 aa29.31■■■□□ 2.28
CGREF1-201ENST00000260595 KIAA0586Q9BVV6 1533 aa29.3■■■□□ 2.28
CGREF1-201ENST00000260595 CARMIL1Q5VZK9 1371 aa29.26■■■□□ 2.28
CGREF1-201ENST00000260595 ADCY10Q96PN6 1610 aa29.04■■■□□ 2.24
CGREF1-201ENST00000260595 NPM1P06748 294 aaKnown RBP eCLIP29.03■■■□□ 2.24
CGREF1-201ENST00000260595 RAPGEF2Q9Y4G8 1499 aa29■■■□□ 2.23
CGREF1-201ENST00000260595 PTPRGP23470 1445 aa28.99■■■□□ 2.23
CGREF1-201ENST00000260595 IQGAP2Q13576 1575 aa28.99■■■□□ 2.23
CGREF1-201ENST00000260595 MAPKBP1O60336 1514 aa28.99■■■□□ 2.23
CGREF1-201ENST00000260595 KIF13AQ9H1H9 1805 aa28.98■■■□□ 2.23
CGREF1-201ENST00000260595 CARMIL2Q6F5E8 1435 aa28.96■■■□□ 2.23
CGREF1-201ENST00000260595 TNIKQ9UKE5 1360 aa28.96■■■□□ 2.23
CGREF1-201ENST00000260595 ABCC10Q5T3U5 1492 aa28.96■■■□□ 2.23
CGREF1-201ENST00000260595 FAM69CQ0P6D2 419 aa28.93■■■□□ 2.22
CGREF1-201ENST00000260595 DISP1Q96F81 1524 aa28.89■■■□□ 2.22
CGREF1-201ENST00000260595 TTBK1Q5TCY1 1321 aaPredicted RBP28.89■■■□□ 2.21
CGREF1-201ENST00000260595 UGGT2Q9NYU1 1516 aa28.85■■■□□ 2.21
CGREF1-201ENST00000260595 DIP2BQ9P265 1576 aa28.85■■■□□ 2.21
CGREF1-201ENST00000260595 ABCC2Q92887 1545 aa28.8■■■□□ 2.2
CGREF1-201ENST00000260595 UHRF1BP1LA0JNW5 1464 aa28.78■■■□□ 2.2
CGREF1-201ENST00000260595 PRXQ9BXM0 1461 aa28.78■■■□□ 2.2
CGREF1-201ENST00000260595 UACAQ9BZF9 1416 aa28.77■■■□□ 2.2
CGREF1-201ENST00000260595 KIAA0556O60303 1618 aa28.73■■■□□ 2.19
CGREF1-201ENST00000260595 ASXL2Q76L83 1435 aa28.69■■■□□ 2.18
CGREF1-201ENST00000260595 PLB1Q6P1J6 1458 aa28.67■■■□□ 2.18
CGREF1-201ENST00000260595 KDM5BQ9UGL1 1544 aa28.66■■■□□ 2.18
CGREF1-201ENST00000260595 CTTNBP2Q8WZ74 1663 aa28.66■■■□□ 2.18
CGREF1-201ENST00000260595 AEBP2Q6ZN18 517 aaPredicted RBP28.62■■■□□ 2.17
CGREF1-201ENST00000260595 GOLGA3Q08378 1498 aa28.6■■■□□ 2.17
CGREF1-201ENST00000260595 GLI2P10070 1586 aa28.59■■■□□ 2.17
CGREF1-201ENST00000260595 CSRNP3Q8WYN3 585 aa28.59■■■□□ 2.17
CGREF1-201ENST00000260595 TSPOAP1O95153 1857 aa28.56■■■□□ 2.16
CGREF1-201ENST00000260595 KDM6BO15054 1643 aa28.54■■■□□ 2.16
CGREF1-201ENST00000260595 ZCCHC11Q5TAX3 1644 aaKnown RBP28.54■■■□□ 2.16
CGREF1-201ENST00000260595 EPRSP07814 1512 aaKnown RBP28.53■■■□□ 2.16
CGREF1-201ENST00000260595 ABCA8O94911 1581 aa28.49■■■□□ 2.15
CGREF1-201ENST00000260595 PPRC1Q5VV67 1664 aaKnown RBP28.48■■■□□ 2.15
CGREF1-201ENST00000260595 EEA1Q15075 1411 aa28.46■■■□□ 2.15
CGREF1-201ENST00000260595 WDR7Q9Y4E6 1490 aa28.42■■■□□ 2.14
CGREF1-201ENST00000260595 MAP3K4Q9Y6R4 1608 aa28.41■■■□□ 2.14
CGREF1-201ENST00000260595 P3H3Q8IVL6 736 aa28.4■■■□□ 2.14
CGREF1-201ENST00000260595 COL17A1Q9UMD9 1497 aaPredicted RBP28.35■■■□□ 2.13
CGREF1-201ENST00000260595 SAMD9Q5K651 1589 aa28.33■■■□□ 2.13
CGREF1-201ENST00000260595 FAM9AQ8IZU1 332 aaPredicted RBP28.33■■■□□ 2.13
CGREF1-201ENST00000260595 TEX14Q8IWB6 1497 aa28.32■■■□□ 2.12
CGREF1-201ENST00000260595 KDM4FA0A1W2PPD8 638 aa28.29■■■□□ 2.12
CGREF1-201ENST00000260595 KCNH8Q96L42 1107 aa28.29■■■□□ 2.12
CGREF1-201ENST00000260595 ATP10BO94823 1461 aa28.28■■■□□ 2.12
CGREF1-201ENST00000260595 CD109Q6YHK3 1445 aa28.26■■■□□ 2.11
CGREF1-201ENST00000260595 ARID3CA6NKF2 412 aa28.25■■■□□ 2.11
CGREF1-201ENST00000260595 MAGI3Q5TCQ9 1506 aa28.23■■■□□ 2.11
CGREF1-201ENST00000260595 CHIC1Q5VXU3 224 aa28.22■■■□□ 2.11
CGREF1-201ENST00000260595 RANGAP1P46060 587 aaPredicted RBP28.2■■■□□ 2.1
CGREF1-201ENST00000260595 KIF21BO75037 1637 aa28.2■■■□□ 2.1
CGREF1-201ENST00000260595 CFAP43Q8NDM7 1665 aa28.19■■■□□ 2.1
CGREF1-201ENST00000260595 RAPGEF6Q8TEU7 1601 aa28.18■■■□□ 2.1
CGREF1-201ENST00000260595 FHOD3Q2V2M9 1422 aa28.17■■■□□ 2.1
CGREF1-201ENST00000260595 NUP153P49790 1475 aaKnown RBP28.13■■■□□ 2.09
CGREF1-201ENST00000260595 EFCAB5A4FU69 1503 aa28.07■■■□□ 2.08
CGREF1-201ENST00000260595 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.06■■■□□ 2.08
CGREF1-201ENST00000260595 HNRNPUL2Q1KMD3 747 aaKnown RBP28.06■■■□□ 2.08
CGREF1-201ENST00000260595 ABCA9Q8IUA7 1624 aa28.05■■■□□ 2.08
CGREF1-201ENST00000260595 ADGRL1O94910 1474 aa28.03■■■□□ 2.08
CGREF1-201ENST00000260595 ARAP3Q8WWN8 1544 aa28.01■■■□□ 2.07
CGREF1-201ENST00000260595 UBTFP17480 764 aaKnown RBP28■■■□□ 2.07
CGREF1-201ENST00000260595 EHMT2Q96KQ7 1210 aa28■■■□□ 2.07
CGREF1-201ENST00000260595 PHLDB1Q86UU1 1377 aa27.97■■■□□ 2.07
CGREF1-201ENST00000260595 PLEKHD1A6NEE1 506 aa27.95■■■□□ 2.06
CGREF1-201ENST00000260595 NEO1Q92859 1461 aa27.91■■■□□ 2.06
CGREF1-201ENST00000260595 ARHGAP35Q9NRY4 1499 aa27.89■■■□□ 2.06
CGREF1-201ENST00000260595 RAPGEF3O95398 923 aa27.86■■■□□ 2.05
CGREF1-201ENST00000260595 CDK13Q14004 1512 aaKnown RBP27.84■■■□□ 2.05
CGREF1-201ENST00000260595 FMN1Q68DA7 1419 aa27.84■■■□□ 2.05
CGREF1-201ENST00000260595 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.82■■■□□ 2.04
CGREF1-201ENST00000260595 FRMPD1Q5SYB0 1578 aa27.77■■■□□ 2.04
CGREF1-201ENST00000260595 TTC37Q6PGP7 1564 aa27.75■■■□□ 2.03
CGREF1-201ENST00000260595 ATP1B4Q9UN42 357 aaPredicted RBP27.75■■■□□ 2.03
CGREF1-201ENST00000260595 AKNAQ7Z591 1439 aa27.75■■■□□ 2.03
CGREF1-201ENST00000260595 FANCAO15360 1455 aa27.74■■■□□ 2.03
CGREF1-201ENST00000260595 HECW1Q76N89 1606 aa27.74■■■□□ 2.03
CGREF1-201ENST00000260595 DENND4BO75064 1496 aaPredicted RBP27.71■■■□□ 2.03
CGREF1-201ENST00000260595 PLCH2O75038 1416 aa27.67■■■□□ 2.02
CGREF1-201ENST00000260595 CFAP74Q9C0B2 1584 aa27.66■■■□□ 2.02
CGREF1-201ENST00000260595 CDK11AQ9UQ88 783 aaPredicted RBP27.66■■■□□ 2.02
CGREF1-201ENST00000260595 RICTORQ6R327 1708 aa27.64■■■□□ 2.01
CGREF1-201ENST00000260595 TROQ12816 1431 aaPredicted RBP27.61■■■□□ 2.01
CGREF1-201ENST00000260595 ADAMTSL3P82987 1691 aa27.59■■■□□ 2.01
CGREF1-201ENST00000260595 ARHGEF40Q8TER5 1519 aa27.58■■■□□ 2.01
CGREF1-201ENST00000260595 HECW2Q9P2P5 1572 aa27.58■■■□□ 2.01
CGREF1-201ENST00000260595 LRRIQ1Q96JM4 1722 aa27.58■■■□□ 2.01
CGREF1-201ENST00000260595 CASKIN1Q8WXD9 1431 aa27.58■■■□□ 2
CGREF1-201ENST00000260595 ZMYM4Q5VZL5 1548 aa27.57■■■□□ 2
CGREF1-201ENST00000260595 KIF14Q15058 1648 aa27.57■■■□□ 2
CGREF1-201ENST00000260595 SCAPERQ9BY12 1400 aa27.57■■■□□ 2
CGREF1-201ENST00000260595 EFCAB2Q5VUJ9 269 aa27.56■■■□□ 2
CGREF1-201ENST00000260595 ARID4BQ4LE39 1312 aaPredicted RBP27.55■■■□□ 2
CGREF1-201ENST00000260595 BCORL1Q5H9F3 1711 aa27.53■■■□□ 2
CGREF1-201ENST00000260595 PTPRMP28827 1452 aa27.53■■■□□ 2
CGREF1-201ENST00000260595 POGZQ7Z3K3 1410 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms