RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 KIAA0586Q9BVV6 1533 aa33.94■■■■□ 3.02
RTCA-201ENST00000260563 IQGAP2Q13576 1575 aa33.92■■■■□ 3.02
RTCA-201ENST00000260563 SHROOM2Q13796 1616 aa33.91■■■■□ 3.02
RTCA-201ENST00000260563 EHMT2Q96KQ7 1210 aa33.81■■■■□ 3
RTCA-201ENST00000260563 DNAJC5Q9H3Z4 198 aa33.79■■■■□ 3
RTCA-201ENST00000260563 ARHGEF11O15085 1522 aa33.75■■■□□ 2.99
RTCA-201ENST00000260563 RIMBP3CA6NJZ7 1639 aa33.74■■■□□ 2.99
RTCA-201ENST00000260563 RIMBP3BA6NNM3 1639 aa33.74■■■□□ 2.99
RTCA-201ENST00000260563 RIMBP3Q9UFD9 1639 aa33.74■■■□□ 2.99
RTCA-201ENST00000260563 UBTFP17480 764 aaKnown RBP33.72■■■□□ 2.99
RTCA-201ENST00000260563 JPH4Q96JJ6 628 aa33.72■■■□□ 2.99
RTCA-201ENST00000260563 UGGT2Q9NYU1 1516 aa33.71■■■□□ 2.99
RTCA-201ENST00000260563 PRG4Q92954 1404 aaPredicted RBP33.68■■■□□ 2.98
RTCA-201ENST00000260563 ERCC6L2Q5T890 1561 aa33.67■■■□□ 2.98
RTCA-201ENST00000260563 KIAA0556O60303 1618 aa33.6■■■□□ 2.97
RTCA-201ENST00000260563 DISP1Q96F81 1524 aa33.57■■■□□ 2.97
RTCA-201ENST00000260563 CARMIL2Q6F5E8 1435 aa33.57■■■□□ 2.97
RTCA-201ENST00000260563 SAMD9Q5K651 1589 aa33.56■■■□□ 2.96
RTCA-201ENST00000260563 TNIKQ9UKE5 1360 aa33.55■■■□□ 2.96
RTCA-201ENST00000260563 LOC105371045A0A1W2PR82 267 aa33.51■■■□□ 2.95
RTCA-201ENST00000260563 ARAP1Q96P48 1450 aa33.5■■■□□ 2.95
RTCA-201ENST00000260563 EFCAB5A4FU69 1503 aa33.5■■■□□ 2.95
RTCA-201ENST00000260563 RANGAP1P46060 587 aaPredicted RBP33.47■■■□□ 2.95
RTCA-201ENST00000260563 ARHGAP35Q9NRY4 1499 aa33.35■■■□□ 2.93
RTCA-201ENST00000260563 PTPRGP23470 1445 aa33.32■■■□□ 2.92
RTCA-201ENST00000260563 CLIP1P30622 1438 aa33.31■■■□□ 2.92
RTCA-201ENST00000260563 FHOD3Q2V2M9 1422 aa33.31■■■□□ 2.92
RTCA-201ENST00000260563 P3H3Q8IVL6 736 aa33.31■■■□□ 2.92
RTCA-201ENST00000260563 CEP162Q5TB80 1403 aa33.3■■■□□ 2.92
RTCA-201ENST00000260563 CYB5RLQ6IPT4 315 aa33.29■■■□□ 2.92
RTCA-201ENST00000260563 TTBK1Q5TCY1 1321 aaPredicted RBP33.28■■■□□ 2.92
RTCA-201ENST00000260563 ADCY10Q96PN6 1610 aa33.19■■■□□ 2.9
RTCA-201ENST00000260563 ABCA8O94911 1581 aa33.16■■■□□ 2.9
RTCA-201ENST00000260563 UACAQ9BZF9 1416 aa33.15■■■□□ 2.9
RTCA-201ENST00000260563 RAPGEF6Q8TEU7 1601 aa33.14■■■□□ 2.9
RTCA-201ENST00000260563 ABCC2Q92887 1545 aa33.14■■■□□ 2.9
RTCA-201ENST00000260563 PLB1Q6P1J6 1458 aa33.14■■■□□ 2.9
RTCA-201ENST00000260563 FMN1Q68DA7 1419 aa33.12■■■□□ 2.89
RTCA-201ENST00000260563 UHRF1BP1LA0JNW5 1464 aa33.1■■■□□ 2.89
RTCA-201ENST00000260563 PCF11O94913 1555 aaKnown RBP33.01■■■□□ 2.87
RTCA-201ENST00000260563 HECW1Q76N89 1606 aa33■■■□□ 2.87
RTCA-201ENST00000260563 ZCCHC11Q5TAX3 1644 aaKnown RBP32.98■■■□□ 2.87
RTCA-201ENST00000260563 KDM5BQ9UGL1 1544 aa32.94■■■□□ 2.86
RTCA-201ENST00000260563 NUP153P49790 1475 aaKnown RBP32.94■■■□□ 2.86
RTCA-201ENST00000260563 FYCO1Q9BQS8 1478 aa32.91■■■□□ 2.86
RTCA-201ENST00000260563 CASKIN1Q8WXD9 1431 aa32.91■■■□□ 2.86
RTCA-201ENST00000260563 LRRIQ1Q96JM4 1722 aa32.9■■■□□ 2.86
RTCA-201ENST00000260563 NPM1P06748 294 aaKnown RBP eCLIP32.9■■■□□ 2.86
RTCA-201ENST00000260563 VPS8Q8N3P4 1428 aa32.87■■■□□ 2.85
RTCA-201ENST00000260563 MAPKBP1O60336 1514 aa32.85■■■□□ 2.85
RTCA-201ENST00000260563 ATP10BO94823 1461 aa32.82■■■□□ 2.84
RTCA-201ENST00000260563 ATP1B4Q9UN42 357 aaPredicted RBP32.82■■■□□ 2.84
RTCA-201ENST00000260563 ARID3CA6NKF2 412 aa32.81■■■□□ 2.84
RTCA-201ENST00000260563 EPRSP07814 1512 aaKnown RBP32.8■■■□□ 2.84
RTCA-201ENST00000260563 CDK13Q14004 1512 aaKnown RBP32.79■■■□□ 2.84
RTCA-201ENST00000260563 CCDC18Q5T9S5 1454 aa32.78■■■□□ 2.84
RTCA-201ENST00000260563 ASXL2Q76L83 1435 aa32.73■■■□□ 2.83
RTCA-201ENST00000260563 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.72■■■□□ 2.83
RTCA-201ENST00000260563 HNRNPUL2Q1KMD3 747 aaKnown RBP32.72■■■□□ 2.83
RTCA-201ENST00000260563 CFAP43Q8NDM7 1665 aa32.69■■■□□ 2.82
RTCA-201ENST00000260563 WDR7Q9Y4E6 1490 aa32.68■■■□□ 2.82
RTCA-201ENST00000260563 KIF13AQ9H1H9 1805 aa32.63■■■□□ 2.81
RTCA-201ENST00000260563 DIP2BQ9P265 1576 aa32.63■■■□□ 2.81
RTCA-201ENST00000260563 TIAM1Q13009 1591 aa32.6■■■□□ 2.81
RTCA-201ENST00000260563 ABCC10Q5T3U5 1492 aa32.58■■■□□ 2.81
RTCA-201ENST00000260563 CDK11AQ9UQ88 783 aaPredicted RBP32.56■■■□□ 2.8
RTCA-201ENST00000260563 PLEKHD1A6NEE1 506 aa32.55■■■□□ 2.8
RTCA-201ENST00000260563 MAP3K1Q13233 1512 aa32.52■■■□□ 2.8
RTCA-201ENST00000260563 MAGI3Q5TCQ9 1506 aa32.52■■■□□ 2.8
RTCA-201ENST00000260563 GLI2P10070 1586 aa32.51■■■□□ 2.8
RTCA-201ENST00000260563 TROQ12816 1431 aaPredicted RBP32.5■■■□□ 2.79
RTCA-201ENST00000260563 KIF14Q15058 1648 aa32.5■■■□□ 2.79
RTCA-201ENST00000260563 EHBP1L1Q8N3D4 1523 aa32.48■■■□□ 2.79
RTCA-201ENST00000260563 TRHP20396 242 aaPredicted RBP32.46■■■□□ 2.79
RTCA-201ENST00000260563 APLP2Q06481 763 aa32.46■■■□□ 2.79
RTCA-201ENST00000260563 KCNH8Q96L42 1107 aa32.46■■■□□ 2.79
RTCA-201ENST00000260563 ABCA9Q8IUA7 1624 aa32.45■■■□□ 2.79
RTCA-201ENST00000260563 MAP3K4Q9Y6R4 1608 aa32.44■■■□□ 2.78
RTCA-201ENST00000260563 FAM69CQ0P6D2 419 aa32.43■■■□□ 2.78
RTCA-201ENST00000260563 MTUS2Q5JR59 1369 aa32.43■■■□□ 2.78
RTCA-201ENST00000260563 TSPOAP1O95153 1857 aa32.4■■■□□ 2.78
RTCA-201ENST00000260563 TTC37Q6PGP7 1564 aa32.4■■■□□ 2.78
RTCA-201ENST00000260563 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.39■■■□□ 2.781e-9■■■□□ 16.2
RTCA-201ENST00000260563 LRRC9Q6ZRR7 1453 aa32.39■■■□□ 2.78
RTCA-201ENST00000260563 SUPT6HQ7KZ85 1726 aaKnown RBP32.38■■■□□ 2.77
RTCA-201ENST00000260563 MYO5CQ9NQX4 1742 aa32.34■■■□□ 2.77
RTCA-201ENST00000260563 PPRC1Q5VV67 1664 aaKnown RBP32.31■■■□□ 2.76
RTCA-201ENST00000260563 CD109Q6YHK3 1445 aa32.28■■■□□ 2.76
RTCA-201ENST00000260563 KANK4Q5T7N3 995 aaPredicted RBP32.26■■■□□ 2.76
RTCA-201ENST00000260563 CDC42BPAQ5VT25 1732 aa32.26■■■□□ 2.76
RTCA-201ENST00000260563 PREX2Q70Z35 1606 aa32.24■■■□□ 2.75
RTCA-201ENST00000260563 ITSN2Q9NZM3 1697 aa32.23■■■□□ 2.75
RTCA-201ENST00000260563 NCOA2Q15596 1464 aa32.23■■■□□ 2.75
RTCA-201ENST00000260563 CDC42BPBQ9Y5S2 1711 aa32.2■■■□□ 2.75
RTCA-201ENST00000260563 TEX14Q8IWB6 1497 aa32.2■■■□□ 2.74
RTCA-201ENST00000260563 CFAP74Q9C0B2 1584 aa32.18■■■□□ 2.74
RTCA-201ENST00000260563 ARAP3Q8WWN8 1544 aa32.18■■■□□ 2.74
RTCA-201ENST00000260563 PLCH2O75038 1416 aa32.14■■■□□ 2.74
RTCA-201ENST00000260563 CCNB3Q8WWL7 1395 aa32.13■■■□□ 2.73
RTCA-201ENST00000260563 ARHGAP5Q13017 1502 aa32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms