RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 CEP170Q5SW79 1584 aa25.44■■□□□ 1.66
GYPC-201ENST00000259254 PRXQ9BXM0 1461 aa25.42■■□□□ 1.66
GYPC-201ENST00000259254 NUP160Q12769 1436 aa25.42■■□□□ 1.66
GYPC-201ENST00000259254 CUL7Q14999 1698 aa25.41■■□□□ 1.66
GYPC-201ENST00000259254 RAPGEF2Q9Y4G8 1499 aa25.37■■□□□ 1.65
GYPC-201ENST00000259254 LOC105371045A0A1W2PR82 267 aa25.37■■□□□ 1.65
GYPC-201ENST00000259254 KIF21BO75037 1637 aa25.37■■□□□ 1.65
GYPC-201ENST00000259254 GOLGA3Q08378 1498 aa25.36■■□□□ 1.65
GYPC-201ENST00000259254 SHROOM2Q13796 1616 aa25.33■■□□□ 1.65
GYPC-201ENST00000259254 UBTFP17480 764 aaKnown RBP25.32■■□□□ 1.64
GYPC-201ENST00000259254 ERCC6L2Q5T890 1561 aa25.28■■□□□ 1.64
GYPC-201ENST00000259254 TNIKQ9UKE5 1360 aa25.15■■□□□ 1.62
GYPC-201ENST00000259254 PRG4Q92954 1404 aaPredicted RBP25.12■■□□□ 1.61
GYPC-201ENST00000259254 TRHP20396 242 aaPredicted RBP25.09■■□□□ 1.61
GYPC-201ENST00000259254 RANGAP1P46060 587 aaPredicted RBP25.09■■□□□ 1.61
GYPC-201ENST00000259254 JPH4Q96JJ6 628 aa25.09■■□□□ 1.61
GYPC-201ENST00000259254 KIAA0586Q9BVV6 1533 aa25.07■■□□□ 1.6
GYPC-201ENST00000259254 CTTNBP2Q8WZ74 1663 aa24.98■■□□□ 1.59
GYPC-201ENST00000259254 CEP162Q5TB80 1403 aa24.98■■□□□ 1.59
GYPC-201ENST00000259254 IQGAP2Q13576 1575 aa24.96■■□□□ 1.59
GYPC-201ENST00000259254 CLIP1P30622 1438 aa24.94■■□□□ 1.58
GYPC-201ENST00000259254 ADCY10Q96PN6 1610 aa24.85■■□□□ 1.57
GYPC-201ENST00000259254 P3H3Q8IVL6 736 aa24.84■■□□□ 1.57
GYPC-201ENST00000259254 UGGT2Q9NYU1 1516 aa24.83■■□□□ 1.57
GYPC-201ENST00000259254 ARHGAP35Q9NRY4 1499 aa24.81■■□□□ 1.56
GYPC-201ENST00000259254 EFCAB5A4FU69 1503 aa24.81■■□□□ 1.56
GYPC-201ENST00000259254 CARMIL2Q6F5E8 1435 aa24.8■■□□□ 1.56
GYPC-201ENST00000259254 KIF13AQ9H1H9 1805 aa24.8■■□□□ 1.56
GYPC-201ENST00000259254 MAPKBP1O60336 1514 aa24.76■■□□□ 1.55
GYPC-201ENST00000259254 PTPRGP23470 1445 aa24.75■■□□□ 1.55
GYPC-201ENST00000259254 FHOD3Q2V2M9 1422 aa24.75■■□□□ 1.55
GYPC-201ENST00000259254 DISP1Q96F81 1524 aa24.75■■□□□ 1.55
GYPC-201ENST00000259254 SAMD9Q5K651 1589 aa24.74■■□□□ 1.55
GYPC-201ENST00000259254 TTBK1Q5TCY1 1321 aaPredicted RBP24.71■■□□□ 1.55
GYPC-201ENST00000259254 NPM1P06748 294 aaKnown RBP eCLIP24.71■■□□□ 1.55
GYPC-201ENST00000259254 KIAA0556O60303 1618 aa24.71■■□□□ 1.55
GYPC-201ENST00000259254 ABCC10Q5T3U5 1492 aa24.66■■□□□ 1.54
GYPC-201ENST00000259254 DIP2BQ9P265 1576 aa24.66■■□□□ 1.54
GYPC-201ENST00000259254 ABCC2Q92887 1545 aa24.62■■□□□ 1.53
GYPC-201ENST00000259254 UHRF1BP1LA0JNW5 1464 aa24.62■■□□□ 1.53
GYPC-201ENST00000259254 VPS8Q8N3P4 1428 aa24.61■■□□□ 1.53
GYPC-201ENST00000259254 FMN1Q68DA7 1419 aa24.61■■□□□ 1.53
GYPC-201ENST00000259254 UACAQ9BZF9 1416 aa24.6■■□□□ 1.53
GYPC-201ENST00000259254 FAM69CQ0P6D2 419 aa24.56■■□□□ 1.52
GYPC-201ENST00000259254 ATP1B4Q9UN42 357 aaPredicted RBP24.55■■□□□ 1.52
GYPC-201ENST00000259254 KDM5BQ9UGL1 1544 aa24.51■■□□□ 1.51
GYPC-201ENST00000259254 ZCCHC11Q5TAX3 1644 aaKnown RBP24.5■■□□□ 1.51
GYPC-201ENST00000259254 ASXL2Q76L83 1435 aa24.49■■□□□ 1.51
GYPC-201ENST00000259254 TSPOAP1O95153 1857 aa24.48■■□□□ 1.51
GYPC-201ENST00000259254 PLB1Q6P1J6 1458 aa24.48■■□□□ 1.51
GYPC-201ENST00000259254 PCF11O94913 1555 aaKnown RBP24.47■■□□□ 1.51
GYPC-201ENST00000259254 CASKIN1Q8WXD9 1431 aa24.47■■□□□ 1.51
GYPC-201ENST00000259254 APLP2Q06481 763 aa24.45■■□□□ 1.5
GYPC-201ENST00000259254 ABCA8O94911 1581 aa24.45■■□□□ 1.5
GYPC-201ENST00000259254 FYCO1Q9BQS8 1478 aa24.45■■□□□ 1.5
GYPC-201ENST00000259254 GLI2P10070 1586 aa24.44■■□□□ 1.5
GYPC-201ENST00000259254 ARID3CA6NKF2 412 aa24.4■■□□□ 1.5
GYPC-201ENST00000259254 RAPGEF6Q8TEU7 1601 aa24.39■■□□□ 1.5
GYPC-201ENST00000259254 HECW1Q76N89 1606 aa24.39■■□□□ 1.49
GYPC-201ENST00000259254 PPRC1Q5VV67 1664 aaKnown RBP24.37■■□□□ 1.49
GYPC-201ENST00000259254 EPRSP07814 1512 aaKnown RBP24.35■■□□□ 1.49
GYPC-201ENST00000259254 KDM6BO15054 1643 aa24.35■■□□□ 1.49
GYPC-201ENST00000259254 NUP153P49790 1475 aaKnown RBP24.34■■□□□ 1.49
GYPC-201ENST00000259254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.34■■□□□ 1.49
GYPC-201ENST00000259254 HNRNPUL2Q1KMD3 747 aaKnown RBP24.34■■□□□ 1.49
GYPC-201ENST00000259254 MAP3K4Q9Y6R4 1608 aa24.34■■□□□ 1.49
GYPC-201ENST00000259254 WDR7Q9Y4E6 1490 aa24.32■■□□□ 1.48
GYPC-201ENST00000259254 CCDC18Q5T9S5 1454 aa24.3■■□□□ 1.48
GYPC-201ENST00000259254 PPARGC1BQ86YN6 1023 aaKnown RBP24.28■■□□□ 1.48
GYPC-201ENST00000259254 CDK13Q14004 1512 aaKnown RBP24.27■■□□□ 1.48
GYPC-201ENST00000259254 TIAM1Q13009 1591 aa24.25■■□□□ 1.47
GYPC-201ENST00000259254 MAP3K1Q13233 1512 aa24.24■■□□□ 1.47
GYPC-201ENST00000259254 ATP10BO94823 1461 aa24.22■■□□□ 1.47
GYPC-201ENST00000259254 CDK11AQ9UQ88 783 aaPredicted RBP24.22■■□□□ 1.47
GYPC-201ENST00000259254 CFAP43Q8NDM7 1665 aa24.21■■□□□ 1.47
GYPC-201ENST00000259254 KANK4Q5T7N3 995 aaPredicted RBP24.2■■□□□ 1.46
GYPC-201ENST00000259254 TEX14Q8IWB6 1497 aa24.19■■□□□ 1.46
GYPC-201ENST00000259254 MTUS2Q5JR59 1369 aa24.19■■□□□ 1.46
GYPC-201ENST00000259254 LRRIQ1Q96JM4 1722 aa24.17■■□□□ 1.46
GYPC-201ENST00000259254 LRRC9Q6ZRR7 1453 aa24.16■■□□□ 1.46
GYPC-201ENST00000259254 PLEKHD1A6NEE1 506 aa24.15■■□□□ 1.46
GYPC-201ENST00000259254 MAGI3Q5TCQ9 1506 aa24.11■■□□□ 1.45
GYPC-201ENST00000259254 KCNH8Q96L42 1107 aa24.11■■□□□ 1.45
GYPC-201ENST00000259254 CD109Q6YHK3 1445 aa24.1■■□□□ 1.45
GYPC-201ENST00000259254 EHBP1L1Q8N3D4 1523 aa24.1■■□□□ 1.45
GYPC-201ENST00000259254 AEBP2Q6ZN18 517 aaPredicted RBP24.1■■□□□ 1.45
GYPC-201ENST00000259254 COL17A1Q9UMD9 1497 aaPredicted RBP24.09■■□□□ 1.45
GYPC-201ENST00000259254 TROQ12816 1431 aaPredicted RBP24.08■■□□□ 1.44
GYPC-201ENST00000259254 ABCA9Q8IUA7 1624 aa24.07■■□□□ 1.44
GYPC-201ENST00000259254 NCOA2Q15596 1464 aa23.99■■□□□ 1.43
GYPC-201ENST00000259254 SUPT6HQ7KZ85 1726 aaKnown RBP23.96■■□□□ 1.43
GYPC-201ENST00000259254 KIF14Q15058 1648 aa23.95■■□□□ 1.43
GYPC-201ENST00000259254 PHLDB1Q86UU1 1377 aa23.92■■□□□ 1.42
GYPC-201ENST00000259254 CCNB3Q8WWL7 1395 aa23.92■■□□□ 1.42
GYPC-201ENST00000259254 ARAP3Q8WWN8 1544 aa23.91■■□□□ 1.42
GYPC-201ENST00000259254 KDM4FA0A1W2PPD8 638 aa23.88■■□□□ 1.41
GYPC-201ENST00000259254 NEO1Q92859 1461 aa23.87■■□□□ 1.41
GYPC-201ENST00000259254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.86■■□□□ 1.414e-6■■■□□ 16.3
GYPC-201ENST00000259254 MYOM3Q5VTT5 1437 aa23.85■■□□□ 1.41
GYPC-201ENST00000259254 TTC37Q6PGP7 1564 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms