RNA–Protein interactions for RNA: ENST00000258704.3

SPDYE1-201, Transcript of speedy/RINGO cell cycle regulator family member E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPDYE1, Length 2,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE1-201ENST00000258704 ERCC6Q03468 1493 aa17.49■□□□□ 0.39
SPDYE1-201ENST00000258704 RRBP1Q9P2E9 1410 aaKnown RBP17.48■□□□□ 0.39
SPDYE1-201ENST00000258704 TIAM1Q13009 1591 aa17.47■□□□□ 0.39
SPDYE1-201ENST00000258704 TARBP1Q13395 1621 aaKnown RBP17.47■□□□□ 0.39
SPDYE1-201ENST00000258704 ITGAEP38570 1179 aa17.47■□□□□ 0.39
SPDYE1-201ENST00000258704 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
SPDYE1-201ENST00000258704 CCNB3Q8WWL7 1395 aa17.46■□□□□ 0.39
SPDYE1-201ENST00000258704 AQRO60306 1485 aaKnown RBP eCLIP17.45■□□□□ 0.38
SPDYE1-201ENST00000258704 PCF11O94913 1555 aaKnown RBP17.44■□□□□ 0.38
SPDYE1-201ENST00000258704 LRRC9Q6ZRR7 1453 aa17.43■□□□□ 0.38
SPDYE1-201ENST00000258704 MRC2Q9UBG0 1479 aa17.43■□□□□ 0.38
SPDYE1-201ENST00000258704 CTTNBP2Q8WZ74 1663 aa17.43■□□□□ 0.38
SPDYE1-201ENST00000258704 MAP3K1Q13233 1512 aa17.42■□□□□ 0.38
SPDYE1-201ENST00000258704 EFCAB5A4FU69 1503 aa17.41■□□□□ 0.38
SPDYE1-201ENST00000258704 PHLDB1Q86UU1 1377 aa17.4■□□□□ 0.38
SPDYE1-201ENST00000258704 DIEXFQ68CQ4 756 aaKnown RBP17.39■□□□□ 0.37
SPDYE1-201ENST00000258704 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
SPDYE1-201ENST00000258704 CASKIN1Q8WXD9 1431 aa17.37■□□□□ 0.37
SPDYE1-201ENST00000258704 SCAF1Q9H7N4 1312 aaKnown RBP17.36■□□□□ 0.37
SPDYE1-201ENST00000258704 DHX57Q6P158 1386 aaKnown RBP17.36■□□□□ 0.37
SPDYE1-201ENST00000258704 ZNF608Q9ULD9 1512 aaPredicted RBP17.35■□□□□ 0.37
SPDYE1-201ENST00000258704 FYCO1Q9BQS8 1478 aa17.35■□□□□ 0.37
SPDYE1-201ENST00000258704 FMN1Q68DA7 1419 aa17.34■□□□□ 0.37
SPDYE1-201ENST00000258704 FAM50AQ14320 339 aaKnown RBP17.34■□□□□ 0.37
SPDYE1-201ENST00000258704 CFAP43Q8NDM7 1665 aa17.32■□□□□ 0.36
SPDYE1-201ENST00000258704 PBRM1Q86U86 1689 aa17.31■□□□□ 0.36
SPDYE1-201ENST00000258704 SNAPC4Q5SXM2 1469 aa17.31■□□□□ 0.36
SPDYE1-201ENST00000258704 SAMD9Q5K651 1589 aa17.3■□□□□ 0.36
SPDYE1-201ENST00000258704 ZNF316A6NFI3 1004 aaPredicted RBP17.3■□□□□ 0.36
SPDYE1-201ENST00000258704 GRIN2BQ13224 1484 aa17.29■□□□□ 0.36
SPDYE1-201ENST00000258704 WDR62O43379 1518 aa17.29■□□□□ 0.36
SPDYE1-201ENST00000258704 IFT140Q96RY7 1462 aa17.28■□□□□ 0.36
SPDYE1-201ENST00000258704 ADAMTS12P58397 1594 aa17.27■□□□□ 0.35
SPDYE1-201ENST00000258704 RAB3GAP2Q9H2M9 1393 aa17.25■□□□□ 0.35
SPDYE1-201ENST00000258704 ACIN1Q9UKV3 1341 aaKnown RBP17.24■□□□□ 0.35
SPDYE1-201ENST00000258704 CLSPNQ9HAW4 1339 aa17.23■□□□□ 0.35
SPDYE1-201ENST00000258704 MTUS2Q5JR59 1369 aa17.23■□□□□ 0.35
SPDYE1-201ENST00000258704 LRRIQ1Q96JM4 1722 aa17.21■□□□□ 0.35
SPDYE1-201ENST00000258704 IQGAP2Q13576 1575 aa17.2■□□□□ 0.34
SPDYE1-201ENST00000258704 ARID3CA6NKF2 412 aa17.19■□□□□ 0.34
SPDYE1-201ENST00000258704 NEUROD1Q13562 356 aa17.19■□□□□ 0.34
SPDYE1-201ENST00000258704 SETD5Q9C0A6 1442 aa17.19■□□□□ 0.34
SPDYE1-201ENST00000258704 CENPBP07199 599 aaPredicted RBP17.18■□□□□ 0.34
SPDYE1-201ENST00000258704 FGD6Q6ZV73 1430 aa17.16■□□□□ 0.34
SPDYE1-201ENST00000258704 EIF4G3O43432 1585 aaKnown RBP17.16■□□□□ 0.34
SPDYE1-201ENST00000258704 NCOA2Q15596 1464 aa17.13■□□□□ 0.33
SPDYE1-201ENST00000258704 FBLN2P98095 1184 aa17.13■□□□□ 0.33
SPDYE1-201ENST00000258704 MAGI3Q5TCQ9 1506 aa17.12■□□□□ 0.33
SPDYE1-201ENST00000258704 CHMP7Q8WUX9 453 aaPredicted RBP17.11■□□□□ 0.33
SPDYE1-201ENST00000258704 GRIN2AQ12879 1464 aa17.11■□□□□ 0.33
SPDYE1-201ENST00000258704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.11■□□□□ 0.33
SPDYE1-201ENST00000258704 KIAA0586Q9BVV6 1533 aa17.1■□□□□ 0.33
SPDYE1-201ENST00000258704 MAPKBP1O60336 1514 aa17.1■□□□□ 0.33
SPDYE1-201ENST00000258704 UGGT2Q9NYU1 1516 aa17.1■□□□□ 0.33
SPDYE1-201ENST00000258704 PTPRKQ15262 1439 aa17.09■□□□□ 0.33
SPDYE1-201ENST00000258704 CDK13Q14004 1512 aaKnown RBP17.08■□□□□ 0.32
SPDYE1-201ENST00000258704 MYOM3Q5VTT5 1437 aa17.08■□□□□ 0.32
SPDYE1-201ENST00000258704 EPRSP07814 1512 aaKnown RBP17.08■□□□□ 0.32
SPDYE1-201ENST00000258704 DISP1Q96F81 1524 aa17.07■□□□□ 0.32
SPDYE1-201ENST00000258704 SIN3AQ96ST3 1273 aa17.06■□□□□ 0.32
SPDYE1-201ENST00000258704 EHBP1L1Q8N3D4 1523 aa17.06■□□□□ 0.32
SPDYE1-201ENST00000258704 CCDC18Q5T9S5 1454 aa17.06■□□□□ 0.32
SPDYE1-201ENST00000258704 PELP1Q8IZL8 1130 aaKnown RBP17.05■□□□□ 0.32
SPDYE1-201ENST00000258704 SUPT6HQ7KZ85 1726 aaKnown RBP17.05■□□□□ 0.32
SPDYE1-201ENST00000258704 HECW1Q76N89 1606 aa17.05■□□□□ 0.32
SPDYE1-201ENST00000258704 MAGI1Q96QZ7 1491 aaPredicted RBP17.04■□□□□ 0.32
SPDYE1-201ENST00000258704 MIER1Q8N108 512 aa17.03■□□□□ 0.32
SPDYE1-201ENST00000258704 GTF3C3Q9Y5Q9 886 aa17.02■□□□□ 0.32
SPDYE1-201ENST00000258704 SYNJ2O15056 1496 aa17.02■□□□□ 0.32
SPDYE1-201ENST00000258704 KIAA0556O60303 1618 aa17.02■□□□□ 0.32
SPDYE1-201ENST00000258704 ARHGEF11O15085 1522 aa17.02■□□□□ 0.31
SPDYE1-201ENST00000258704 CEP170Q5SW79 1584 aa17■□□□□ 0.31
SPDYE1-201ENST00000258704 CHIC2Q9UKJ5 165 aa17■□□□□ 0.31
SPDYE1-201ENST00000258704 PTPN23Q9H3S7 1636 aa16.98■□□□□ 0.31
SPDYE1-201ENST00000258704 JPH4Q96JJ6 628 aa16.98■□□□□ 0.31
SPDYE1-201ENST00000258704 NUP153P49790 1475 aaKnown RBP16.97■□□□□ 0.31
SPDYE1-201ENST00000258704 HFM1A2PYH4 1435 aa16.97■□□□□ 0.31
SPDYE1-201ENST00000258704 RRP7BPQ9NSQ0 103 aa16.97■□□□□ 0.31
SPDYE1-201ENST00000258704 YTHDC1Q96MU7 727 aaKnown RBP16.96■□□□□ 0.3
SPDYE1-201ENST00000258704 NAIPQ13075 1403 aa16.95■□□□□ 0.3
SPDYE1-201ENST00000258704 NUP160Q12769 1436 aa16.93■□□□□ 0.3
SPDYE1-201ENST00000258704 PLB1Q6P1J6 1458 aa16.92■□□□□ 0.3
SPDYE1-201ENST00000258704 RAPGEF6Q8TEU7 1601 aa16.91■□□□□ 0.3
SPDYE1-201ENST00000258704 TCOF1Q13428 1488 aaKnown RBP16.91■□□□□ 0.3
SPDYE1-201ENST00000258704 ZNF644Q9H582 1327 aaPredicted RBP16.91■□□□□ 0.3
SPDYE1-201ENST00000258704 PRG4Q92954 1404 aaPredicted RBP16.88■□□□□ 0.29
SPDYE1-201ENST00000258704 CDK11AQ9UQ88 783 aaPredicted RBP16.88■□□□□ 0.29
SPDYE1-201ENST00000258704 MIA2Q96PC5 1412 aa16.88■□□□□ 0.29
SPDYE1-201ENST00000258704 UACAQ9BZF9 1416 aa16.88■□□□□ 0.29
SPDYE1-201ENST00000258704 CARMIL2Q6F5E8 1435 aa16.87■□□□□ 0.29
SPDYE1-201ENST00000258704 PPP1R15AO75807 674 aaPredicted RBP16.83■□□□□ 0.29
SPDYE1-201ENST00000258704 TRIM52Q96A61 297 aa16.83■□□□□ 0.28
SPDYE1-201ENST00000258704 TIMELESSQ9UNS1 1208 aa16.82■□□□□ 0.28
SPDYE1-201ENST00000258704 KDM6BO15054 1643 aa16.81■□□□□ 0.28
SPDYE1-201ENST00000258704 TROQ12816 1431 aaPredicted RBP16.81■□□□□ 0.28
SPDYE1-201ENST00000258704 HIRIP3Q9BW71 556 aaPredicted RBP16.8■□□□□ 0.28
SPDYE1-201ENST00000258704 ABCC5O15440 1437 aa16.79■□□□□ 0.28
SPDYE1-201ENST00000258704 CFDP1Q9UEE9 299 aaPredicted RBP16.79■□□□□ 0.28
SPDYE1-201ENST00000258704 ZNF777Q9ULD5 760 aaPredicted RBP16.79■□□□□ 0.28
SPDYE1-201ENST00000258704 DAPK1P53355 1430 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms