RNA–Protein interactions for RNA: ENST00000254644.12

MRPL35-201, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MRPL35, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-201ENST00000254644 CUL7Q14999 1698 aa22.89■■□□□ 1.25
MRPL35-201ENST00000254644 KIF27Q86VH2 1401 aa22.89■■□□□ 1.25
MRPL35-201ENST00000254644 CHIC1Q5VXU3 224 aa22.85■■□□□ 1.25
MRPL35-201ENST00000254644 KIAA0586Q9BVV6 1533 aa22.83■■□□□ 1.25
MRPL35-201ENST00000254644 KIF13AQ9H1H9 1805 aa22.82■■□□□ 1.24
MRPL35-201ENST00000254644 AEBP2Q6ZN18 517 aaPredicted RBP22.79■■□□□ 1.24
MRPL35-201ENST00000254644 CARMIL1Q5VZK9 1371 aa22.73■■□□□ 1.23
MRPL35-201ENST00000254644 ADCY10Q96PN6 1610 aa22.71■■□□□ 1.23
MRPL35-201ENST00000254644 MAPKBP1O60336 1514 aa22.69■■□□□ 1.22
MRPL35-201ENST00000254644 ABCC10Q5T3U5 1492 aa22.64■■□□□ 1.21
MRPL35-201ENST00000254644 IQGAP2Q13576 1575 aa22.6■■□□□ 1.21
MRPL35-201ENST00000254644 DIP2BQ9P265 1576 aa22.6■■□□□ 1.21
MRPL35-201ENST00000254644 NPM1P06748 294 aaKnown RBP eCLIP22.6■■□□□ 1.21
MRPL35-201ENST00000254644 PTPRGP23470 1445 aa22.57■■□□□ 1.2
MRPL35-201ENST00000254644 FAM69CQ0P6D2 419 aa22.55■■□□□ 1.2
MRPL35-201ENST00000254644 CARMIL2Q6F5E8 1435 aa22.55■■□□□ 1.2
MRPL35-201ENST00000254644 TNIKQ9UKE5 1360 aa22.54■■□□□ 1.2
MRPL35-201ENST00000254644 RAPGEF2Q9Y4G8 1499 aa22.54■■□□□ 1.2
MRPL35-201ENST00000254644 DISP1Q96F81 1524 aa22.52■■□□□ 1.19
MRPL35-201ENST00000254644 UGGT2Q9NYU1 1516 aa22.49■■□□□ 1.19
MRPL35-201ENST00000254644 ABCC2Q92887 1545 aa22.48■■□□□ 1.19
MRPL35-201ENST00000254644 UHRF1BP1LA0JNW5 1464 aa22.47■■□□□ 1.19
MRPL35-201ENST00000254644 TSPOAP1O95153 1857 aa22.45■■□□□ 1.19
MRPL35-201ENST00000254644 CTTNBP2Q8WZ74 1663 aa22.42■■□□□ 1.18
MRPL35-201ENST00000254644 UACAQ9BZF9 1416 aa22.41■■□□□ 1.18
MRPL35-201ENST00000254644 KIAA0556O60303 1618 aa22.41■■□□□ 1.18
MRPL35-201ENST00000254644 GLI2P10070 1586 aa22.38■■□□□ 1.17
MRPL35-201ENST00000254644 TTBK1Q5TCY1 1321 aaPredicted RBP22.38■■□□□ 1.17
MRPL35-201ENST00000254644 KDM5BQ9UGL1 1544 aa22.37■■□□□ 1.17
MRPL35-201ENST00000254644 PLB1Q6P1J6 1458 aa22.37■■□□□ 1.17
MRPL35-201ENST00000254644 ASXL2Q76L83 1435 aa22.37■■□□□ 1.17
MRPL35-201ENST00000254644 KDM6BO15054 1643 aa22.36■■□□□ 1.17
MRPL35-201ENST00000254644 PRXQ9BXM0 1461 aa22.35■■□□□ 1.17
MRPL35-201ENST00000254644 PPRC1Q5VV67 1664 aaKnown RBP22.35■■□□□ 1.17
MRPL35-201ENST00000254644 ZCCHC11Q5TAX3 1644 aaKnown RBP22.31■■□□□ 1.16
MRPL35-201ENST00000254644 MAP3K4Q9Y6R4 1608 aa22.27■■□□□ 1.16
MRPL35-201ENST00000254644 EPRSP07814 1512 aaKnown RBP22.26■■□□□ 1.15
MRPL35-201ENST00000254644 GOLGA3Q08378 1498 aa22.26■■□□□ 1.15
MRPL35-201ENST00000254644 ABCA8O94911 1581 aa22.22■■□□□ 1.15
MRPL35-201ENST00000254644 WDR7Q9Y4E6 1490 aa22.16■■□□□ 1.14
MRPL35-201ENST00000254644 COL17A1Q9UMD9 1497 aaPredicted RBP22.15■■□□□ 1.14
MRPL35-201ENST00000254644 KDM4FA0A1W2PPD8 638 aa22.14■■□□□ 1.13
MRPL35-201ENST00000254644 CSRNP3Q8WYN3 585 aa22.13■■□□□ 1.13
MRPL35-201ENST00000254644 TEX14Q8IWB6 1497 aa22.12■■□□□ 1.13
MRPL35-201ENST00000254644 CFAP43Q8NDM7 1665 aa22.1■■□□□ 1.13
MRPL35-201ENST00000254644 SAMD9Q5K651 1589 aa22.09■■□□□ 1.13
MRPL35-201ENST00000254644 EEA1Q15075 1411 aa22.06■■□□□ 1.12
MRPL35-201ENST00000254644 MAGI3Q5TCQ9 1506 aa22.06■■□□□ 1.12
MRPL35-201ENST00000254644 ATP10BO94823 1461 aa22.03■■□□□ 1.12
MRPL35-201ENST00000254644 CD109Q6YHK3 1445 aa22.01■■□□□ 1.11
MRPL35-201ENST00000254644 P3H3Q8IVL6 736 aa21.99■■□□□ 1.11
MRPL35-201ENST00000254644 KCNH8Q96L42 1107 aa21.99■■□□□ 1.11
MRPL35-201ENST00000254644 RAPGEF6Q8TEU7 1601 aa21.97■■□□□ 1.11
MRPL35-201ENST00000254644 FAM9AQ8IZU1 332 aaPredicted RBP21.95■■□□□ 1.1
MRPL35-201ENST00000254644 ADGRL1O94910 1474 aa21.94■■□□□ 1.1
MRPL35-201ENST00000254644 KIF21BO75037 1637 aa21.93■■□□□ 1.1
MRPL35-201ENST00000254644 ABCA9Q8IUA7 1624 aa21.93■■□□□ 1.1
MRPL35-201ENST00000254644 ARAP3Q8WWN8 1544 aa21.89■■□□□ 1.09
MRPL35-201ENST00000254644 NUP153P49790 1475 aaKnown RBP21.89■■□□□ 1.09
MRPL35-201ENST00000254644 ARID3CA6NKF2 412 aa21.88■■□□□ 1.09
MRPL35-201ENST00000254644 FHOD3Q2V2M9 1422 aa21.85■■□□□ 1.09
MRPL35-201ENST00000254644 EFCAB5A4FU69 1503 aa21.83■■□□□ 1.09
MRPL35-201ENST00000254644 PHLDB1Q86UU1 1377 aa21.83■■□□□ 1.08
MRPL35-201ENST00000254644 NEO1Q92859 1461 aa21.78■■□□□ 1.08
MRPL35-201ENST00000254644 RANGAP1P46060 587 aaPredicted RBP21.77■■□□□ 1.08
MRPL35-201ENST00000254644 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.74■■□□□ 1.07
MRPL35-201ENST00000254644 HNRNPUL2Q1KMD3 747 aaKnown RBP21.74■■□□□ 1.07
MRPL35-201ENST00000254644 FRMPD1Q5SYB0 1578 aa21.71■■□□□ 1.07
MRPL35-201ENST00000254644 PLEKHD1A6NEE1 506 aa21.71■■□□□ 1.07
MRPL35-201ENST00000254644 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.7■■□□□ 1.06
MRPL35-201ENST00000254644 RAPGEF3O95398 923 aa21.68■■□□□ 1.06
MRPL35-201ENST00000254644 RICTORQ6R327 1708 aa21.66■■□□□ 1.06
MRPL35-201ENST00000254644 ARHGAP35Q9NRY4 1499 aa21.65■■□□□ 1.06
MRPL35-201ENST00000254644 ADAMTSL3P82987 1691 aa21.65■■□□□ 1.06
MRPL35-201ENST00000254644 TTC37Q6PGP7 1564 aa21.65■■□□□ 1.06
MRPL35-201ENST00000254644 HECW2Q9P2P5 1572 aa21.65■■□□□ 1.06
MRPL35-201ENST00000254644 CDK13Q14004 1512 aaKnown RBP21.64■■□□□ 1.05
MRPL35-201ENST00000254644 CFAP74Q9C0B2 1584 aa21.63■■□□□ 1.05
MRPL35-201ENST00000254644 UBTFP17480 764 aaKnown RBP21.63■■□□□ 1.05
MRPL35-201ENST00000254644 FMN1Q68DA7 1419 aa21.62■■□□□ 1.05
MRPL35-201ENST00000254644 AKNAQ7Z591 1439 aa21.62■■□□□ 1.05
MRPL35-201ENST00000254644 FANCAO15360 1455 aa21.61■■□□□ 1.05
MRPL35-201ENST00000254644 HECW1Q76N89 1606 aa21.59■■□□□ 1.05
MRPL35-201ENST00000254644 BCORL1Q5H9F3 1711 aa21.59■■□□□ 1.05
MRPL35-201ENST00000254644 DENND4BO75064 1496 aaPredicted RBP21.58■■□□□ 1.05
MRPL35-201ENST00000254644 LRRIQ1Q96JM4 1722 aa21.57■■□□□ 1.04
MRPL35-201ENST00000254644 ARHGEF40Q8TER5 1519 aa21.56■■□□□ 1.04
MRPL35-201ENST00000254644 ZMYM4Q5VZL5 1548 aa21.55■■□□□ 1.04
MRPL35-201ENST00000254644 EHMT2Q96KQ7 1210 aa21.55■■□□□ 1.04
MRPL35-201ENST00000254644 PLCH2O75038 1416 aa21.55■■□□□ 1.04
MRPL35-201ENST00000254644 PTPRMP28827 1452 aa21.53■■□□□ 1.04
MRPL35-201ENST00000254644 MYO5CQ9NQX4 1742 aa21.52■■□□□ 1.04
MRPL35-201ENST00000254644 MADDQ8WXG6 1647 aa21.5■■□□□ 1.03
MRPL35-201ENST00000254644 KIF14Q15058 1648 aa21.49■■□□□ 1.03
MRPL35-201ENST00000254644 MAGI2Q86UL8 1455 aa21.49■■□□□ 1.03
MRPL35-201ENST00000254644 SIGLEC1Q9BZZ2 1709 aa21.49■■□□□ 1.03
MRPL35-201ENST00000254644 CDK11AQ9UQ88 783 aaPredicted RBP21.47■■□□□ 1.03
MRPL35-201ENST00000254644 TROQ12816 1431 aaPredicted RBP21.46■■□□□ 1.03
MRPL35-201ENST00000254644 ZFYVE16Q7Z3T8 1539 aa21.45■■□□□ 1.02
MRPL35-201ENST00000254644 ATP1B4Q9UN42 357 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms