RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 KIAA0586Q9BVV6 1533 aa24.06■■□□□ 1.44
CNN1-201ENST00000252456 RAPGEF2Q9Y4G8 1499 aa24.06■■□□□ 1.44
CNN1-201ENST00000252456 CYB5RLQ6IPT4 315 aa24.05■■□□□ 1.44
CNN1-201ENST00000252456 PRXQ9BXM0 1461 aa24.02■■□□□ 1.44
CNN1-201ENST00000252456 JPH4Q96JJ6 628 aa24■■□□□ 1.43
CNN1-201ENST00000252456 PRG4Q92954 1404 aaPredicted RBP23.99■■□□□ 1.43
CNN1-201ENST00000252456 EEA1Q15075 1411 aa23.95■■□□□ 1.43
CNN1-201ENST00000252456 IQGAP2Q13576 1575 aa23.95■■□□□ 1.42
CNN1-201ENST00000252456 CSRNP3Q8WYN3 585 aa23.91■■□□□ 1.42
CNN1-201ENST00000252456 CTTNBP2Q8WZ74 1663 aa23.9■■□□□ 1.42
CNN1-201ENST00000252456 UGGT2Q9NYU1 1516 aa23.83■■□□□ 1.4
CNN1-201ENST00000252456 FAM9AQ8IZU1 332 aaPredicted RBP23.81■■□□□ 1.4
CNN1-201ENST00000252456 DISP1Q96F81 1524 aa23.8■■□□□ 1.4
CNN1-201ENST00000252456 KIF21BO75037 1637 aa23.78■■□□□ 1.4
CNN1-201ENST00000252456 CARMIL2Q6F5E8 1435 aa23.75■■□□□ 1.39
CNN1-201ENST00000252456 KIAA0556O60303 1618 aa23.74■■□□□ 1.39
CNN1-201ENST00000252456 TNIKQ9UKE5 1360 aa23.7■■□□□ 1.38
CNN1-201ENST00000252456 ADCY10Q96PN6 1610 aa23.7■■□□□ 1.38
CNN1-201ENST00000252456 PTPRGP23470 1445 aa23.67■■□□□ 1.38
CNN1-201ENST00000252456 GOLGA3Q08378 1498 aa23.62■■□□□ 1.37
CNN1-201ENST00000252456 SAMD9Q5K651 1589 aa23.6■■□□□ 1.37
CNN1-201ENST00000252456 TTBK1Q5TCY1 1321 aaPredicted RBP23.59■■□□□ 1.37
CNN1-201ENST00000252456 UHRF1BP1LA0JNW5 1464 aa23.55■■□□□ 1.36
CNN1-201ENST00000252456 ABCC2Q92887 1545 aa23.54■■□□□ 1.36
CNN1-201ENST00000252456 UACAQ9BZF9 1416 aa23.53■■□□□ 1.36
CNN1-201ENST00000252456 MAPKBP1O60336 1514 aa23.52■■□□□ 1.36
CNN1-201ENST00000252456 TRHP20396 242 aaPredicted RBP23.51■■□□□ 1.35
CNN1-201ENST00000252456 EHMT2Q96KQ7 1210 aa23.5■■□□□ 1.35
CNN1-201ENST00000252456 PLB1Q6P1J6 1458 aa23.49■■□□□ 1.35
CNN1-201ENST00000252456 ABCA8O94911 1581 aa23.48■■□□□ 1.35
CNN1-201ENST00000252456 KIF13AQ9H1H9 1805 aa23.47■■□□□ 1.35
CNN1-201ENST00000252456 P3H3Q8IVL6 736 aa23.45■■□□□ 1.34
CNN1-201ENST00000252456 KDM5BQ9UGL1 1544 aa23.45■■□□□ 1.34
CNN1-201ENST00000252456 UBTFP17480 764 aaKnown RBP23.44■■□□□ 1.34
CNN1-201ENST00000252456 EFCAB5A4FU69 1503 aa23.44■■□□□ 1.34
CNN1-201ENST00000252456 NPM1P06748 294 aaKnown RBP eCLIP23.44■■□□□ 1.34
CNN1-201ENST00000252456 ZCCHC11Q5TAX3 1644 aaKnown RBP23.42■■□□□ 1.34
CNN1-201ENST00000252456 RANGAP1P46060 587 aaPredicted RBP23.41■■□□□ 1.34
CNN1-201ENST00000252456 FHOD3Q2V2M9 1422 aa23.41■■□□□ 1.34
CNN1-201ENST00000252456 DIP2BQ9P265 1576 aa23.4■■□□□ 1.34
CNN1-201ENST00000252456 ABCC10Q5T3U5 1492 aa23.39■■□□□ 1.34
CNN1-201ENST00000252456 ASXL2Q76L83 1435 aa23.36■■□□□ 1.33
CNN1-201ENST00000252456 ARHGAP35Q9NRY4 1499 aa23.35■■□□□ 1.33
CNN1-201ENST00000252456 RAPGEF6Q8TEU7 1601 aa23.34■■□□□ 1.33
CNN1-201ENST00000252456 FAM69CQ0P6D2 419 aa23.27■■□□□ 1.32
CNN1-201ENST00000252456 NUP153P49790 1475 aaKnown RBP23.27■■□□□ 1.32
CNN1-201ENST00000252456 ATP10BO94823 1461 aa23.26■■□□□ 1.31
CNN1-201ENST00000252456 WDR7Q9Y4E6 1490 aa23.24■■□□□ 1.31
CNN1-201ENST00000252456 GLI2P10070 1586 aa23.24■■□□□ 1.31
CNN1-201ENST00000252456 EPRSP07814 1512 aaKnown RBP23.23■■□□□ 1.31
CNN1-201ENST00000252456 ARID3CA6NKF2 412 aa23.19■■□□□ 1.3
CNN1-201ENST00000252456 TSPOAP1O95153 1857 aa23.18■■□□□ 1.3
CNN1-201ENST00000252456 FMN1Q68DA7 1419 aa23.18■■□□□ 1.3
CNN1-201ENST00000252456 MAP3K4Q9Y6R4 1608 aa23.17■■□□□ 1.3
CNN1-201ENST00000252456 PPRC1Q5VV67 1664 aaKnown RBP23.17■■□□□ 1.3
CNN1-201ENST00000252456 CLIP1P30622 1438 aa23.15■■□□□ 1.3
CNN1-201ENST00000252456 HECW1Q76N89 1606 aa23.12■■□□□ 1.29
CNN1-201ENST00000252456 LRRIQ1Q96JM4 1722 aa23.1■■□□□ 1.29
CNN1-201ENST00000252456 CDK13Q14004 1512 aaKnown RBP23.1■■□□□ 1.29
CNN1-201ENST00000252456 CFAP43Q8NDM7 1665 aa23.08■■□□□ 1.29
CNN1-201ENST00000252456 LOC105371045A0A1W2PR82 267 aa23.08■■□□□ 1.29
CNN1-201ENST00000252456 PCF11O94913 1555 aaKnown RBP23.08■■□□□ 1.29
CNN1-201ENST00000252456 CEP162Q5TB80 1403 aa23.07■■□□□ 1.28
CNN1-201ENST00000252456 KCNH8Q96L42 1107 aa23.05■■□□□ 1.28
CNN1-201ENST00000252456 ABCA9Q8IUA7 1624 aa23.04■■□□□ 1.28
CNN1-201ENST00000252456 CASKIN1Q8WXD9 1431 aa23.03■■□□□ 1.28
CNN1-201ENST00000252456 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.03■■□□□ 1.28
CNN1-201ENST00000252456 HNRNPUL2Q1KMD3 747 aaKnown RBP23.03■■□□□ 1.28
CNN1-201ENST00000252456 CD109Q6YHK3 1445 aa22.99■■□□□ 1.27
CNN1-201ENST00000252456 KDM6BO15054 1643 aa22.99■■□□□ 1.27
CNN1-201ENST00000252456 MAGI3Q5TCQ9 1506 aa22.99■■□□□ 1.27
CNN1-201ENST00000252456 FYCO1Q9BQS8 1478 aa22.99■■□□□ 1.27
CNN1-201ENST00000252456 ATP1B4Q9UN42 357 aaPredicted RBP22.97■■□□□ 1.27
CNN1-201ENST00000252456 TEX14Q8IWB6 1497 aa22.96■■□□□ 1.27
CNN1-201ENST00000252456 PLEKHD1A6NEE1 506 aa22.96■■□□□ 1.27
CNN1-201ENST00000252456 CCDC18Q5T9S5 1454 aa22.93■■□□□ 1.26
CNN1-201ENST00000252456 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.93■■□□□ 1.26
CNN1-201ENST00000252456 TTC37Q6PGP7 1564 aa22.92■■□□□ 1.26
CNN1-201ENST00000252456 COL17A1Q9UMD9 1497 aaPredicted RBP22.92■■□□□ 1.26
CNN1-201ENST00000252456 KIF14Q15058 1648 aa22.89■■□□□ 1.25
CNN1-201ENST00000252456 TROQ12816 1431 aaPredicted RBP22.87■■□□□ 1.25
CNN1-201ENST00000252456 CDK11AQ9UQ88 783 aaPredicted RBP22.84■■□□□ 1.25
CNN1-201ENST00000252456 NEO1Q92859 1461 aa22.8■■□□□ 1.24
CNN1-201ENST00000252456 ARAP3Q8WWN8 1544 aa22.8■■□□□ 1.24
CNN1-201ENST00000252456 VPS8Q8N3P4 1428 aa22.79■■□□□ 1.24
CNN1-201ENST00000252456 MYO5CQ9NQX4 1742 aa22.79■■□□□ 1.24
CNN1-201ENST00000252456 PLCH2O75038 1416 aa22.75■■□□□ 1.23
CNN1-201ENST00000252456 CFAP74Q9C0B2 1584 aa22.75■■□□□ 1.23
CNN1-201ENST00000252456 PHLDB1Q86UU1 1377 aa22.75■■□□□ 1.23
CNN1-201ENST00000252456 FANCAO15360 1455 aa22.75■■□□□ 1.23
CNN1-201ENST00000252456 FRMPD1Q5SYB0 1578 aa22.71■■□□□ 1.23
CNN1-201ENST00000252456 CDC42BPBQ9Y5S2 1711 aa22.71■■□□□ 1.23
CNN1-201ENST00000252456 CDC42BPAQ5VT25 1732 aa22.7■■□□□ 1.22
CNN1-201ENST00000252456 PREX2Q70Z35 1606 aa22.7■■□□□ 1.22
CNN1-201ENST00000252456 AKNAQ7Z591 1439 aa22.7■■□□□ 1.22
CNN1-201ENST00000252456 TIAM1Q13009 1591 aa22.69■■□□□ 1.22
CNN1-201ENST00000252456 EHBP1L1Q8N3D4 1523 aa22.68■■□□□ 1.22
CNN1-201ENST00000252456 RICTORQ6R327 1708 aa22.68■■□□□ 1.22
CNN1-201ENST00000252456 MTUS2Q5JR59 1369 aa22.66■■□□□ 1.22
CNN1-201ENST00000252456 ARHGAP5Q13017 1502 aa22.64■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms