RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 JPH4Q96JJ6 628 aa41■■■■■ 4.15
SDF2L1-201ENST00000248958 RAPGEF2Q9Y4G8 1499 aa41■■■■■ 4.15
SDF2L1-201ENST00000248958 ERCC6L2Q5T890 1561 aa40.94■■■■■ 4.14
SDF2L1-201ENST00000248958 PRG4Q92954 1404 aaPredicted RBP40.91■■■■■ 4.14
SDF2L1-201ENST00000248958 EEA1Q15075 1411 aa40.86■■■■■ 4.13
SDF2L1-201ENST00000248958 CHIC1Q5VXU3 224 aa40.86■■■■■ 4.13
SDF2L1-201ENST00000248958 PRXQ9BXM0 1461 aa40.81■■■■■ 4.12
SDF2L1-201ENST00000248958 IQGAP2Q13576 1575 aa40.78■■■■■ 4.12
SDF2L1-201ENST00000248958 CSRNP3Q8WYN3 585 aa40.76■■■■■ 4.12
SDF2L1-201ENST00000248958 CTTNBP2Q8WZ74 1663 aa40.66■■■■■ 4.1
SDF2L1-201ENST00000248958 CARMIL2Q6F5E8 1435 aa40.62■■■■■ 4.09
SDF2L1-201ENST00000248958 UGGT2Q9NYU1 1516 aa40.56■■■■■ 4.08
SDF2L1-201ENST00000248958 FAM9AQ8IZU1 332 aaPredicted RBP40.49■■■■■ 4.07
SDF2L1-201ENST00000248958 TNIKQ9UKE5 1360 aa40.47■■■■■ 4.07
SDF2L1-201ENST00000248958 DISP1Q96F81 1524 aa40.46■■■■■ 4.07
SDF2L1-201ENST00000248958 PTPRGP23470 1445 aa40.42■■■■■ 4.06
SDF2L1-201ENST00000248958 KIF21BO75037 1637 aa40.41■■■■■ 4.06
SDF2L1-201ENST00000248958 KIAA0556O60303 1618 aa40.38■■■■■ 4.06
SDF2L1-201ENST00000248958 GOLGA3Q08378 1498 aa40.37■■■■■ 4.05
SDF2L1-201ENST00000248958 TRHP20396 242 aaPredicted RBP40.34■■■■■ 4.05
SDF2L1-201ENST00000248958 ADCY10Q96PN6 1610 aa40.31■■■■■ 4.04
SDF2L1-201ENST00000248958 NPM1P06748 294 aaKnown RBP eCLIP40.28■■■■■ 4.04
SDF2L1-201ENST00000248958 TTBK1Q5TCY1 1321 aaPredicted RBP40.23■■■■■ 4.03
SDF2L1-201ENST00000248958 UACAQ9BZF9 1416 aa40.17■■■■■ 4.02
SDF2L1-201ENST00000248958 UHRF1BP1LA0JNW5 1464 aa40.16■■■■■ 4.02
SDF2L1-201ENST00000248958 MAPKBP1O60336 1514 aa40.12■■■■■ 4.01
SDF2L1-201ENST00000248958 ABCC2Q92887 1545 aa40.11■■■■■ 4.01
SDF2L1-201ENST00000248958 SAMD9Q5K651 1589 aa40.1■■■■■ 4.01
SDF2L1-201ENST00000248958 UBTFP17480 764 aaKnown RBP40.01■■■■■ 4
SDF2L1-201ENST00000248958 ABCA8O94911 1581 aa39.96■■■■□ 3.99
SDF2L1-201ENST00000248958 KDM5BQ9UGL1 1544 aa39.96■■■■□ 3.99
SDF2L1-201ENST00000248958 P3H3Q8IVL6 736 aa39.95■■■■□ 3.99
SDF2L1-201ENST00000248958 KIF13AQ9H1H9 1805 aa39.94■■■■□ 3.98
SDF2L1-201ENST00000248958 EFCAB5A4FU69 1503 aa39.94■■■■□ 3.98
SDF2L1-201ENST00000248958 ABCC10Q5T3U5 1492 aa39.94■■■■□ 3.98
SDF2L1-201ENST00000248958 PLB1Q6P1J6 1458 aa39.94■■■■□ 3.98
SDF2L1-201ENST00000248958 EHMT2Q96KQ7 1210 aa39.91■■■■□ 3.98
SDF2L1-201ENST00000248958 RANGAP1P46060 587 aaPredicted RBP39.88■■■■□ 3.97
SDF2L1-201ENST00000248958 ZCCHC11Q5TAX3 1644 aaKnown RBP39.87■■■■□ 3.97
SDF2L1-201ENST00000248958 DIP2BQ9P265 1576 aa39.85■■■■□ 3.97
SDF2L1-201ENST00000248958 FAM69CQ0P6D2 419 aa39.82■■■■□ 3.97
SDF2L1-201ENST00000248958 ASXL2Q76L83 1435 aa39.82■■■■□ 3.96
SDF2L1-201ENST00000248958 FHOD3Q2V2M9 1422 aa39.78■■■■□ 3.96
SDF2L1-201ENST00000248958 RAPGEF6Q8TEU7 1601 aa39.75■■■■□ 3.95
SDF2L1-201ENST00000248958 GLI2P10070 1586 aa39.67■■■■□ 3.94
SDF2L1-201ENST00000248958 ARHGAP35Q9NRY4 1499 aa39.64■■■■□ 3.94
SDF2L1-201ENST00000248958 WDR7Q9Y4E6 1490 aa39.62■■■■□ 3.93
SDF2L1-201ENST00000248958 EPRSP07814 1512 aaKnown RBP39.6■■■■□ 3.93
SDF2L1-201ENST00000248958 ATP10BO94823 1461 aa39.6■■■■□ 3.93
SDF2L1-201ENST00000248958 FMN1Q68DA7 1419 aa39.56■■■■□ 3.92
SDF2L1-201ENST00000248958 NUP153P49790 1475 aaKnown RBP39.54■■■■□ 3.92
SDF2L1-201ENST00000248958 TSPOAP1O95153 1857 aa39.52■■■■□ 3.92
SDF2L1-201ENST00000248958 ARID3CA6NKF2 412 aa39.48■■■■□ 3.91
SDF2L1-201ENST00000248958 MAP3K4Q9Y6R4 1608 aa39.46■■■■□ 3.91
SDF2L1-201ENST00000248958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.43■■■■□ 3.9
SDF2L1-201ENST00000248958 HNRNPUL2Q1KMD3 747 aaKnown RBP39.43■■■■□ 3.9
SDF2L1-201ENST00000248958 KCNH8Q96L42 1107 aa39.38■■■■□ 3.89
SDF2L1-201ENST00000248958 HECW1Q76N89 1606 aa39.38■■■■□ 3.89
SDF2L1-201ENST00000248958 CLIP1P30622 1438 aa39.38■■■■□ 3.89
SDF2L1-201ENST00000248958 PPRC1Q5VV67 1664 aaKnown RBP39.38■■■■□ 3.89
SDF2L1-201ENST00000248958 CFAP43Q8NDM7 1665 aa39.38■■■■□ 3.89
SDF2L1-201ENST00000248958 TEX14Q8IWB6 1497 aa39.32■■■■□ 3.89
SDF2L1-201ENST00000248958 PLEKHD1A6NEE1 506 aa39.3■■■■□ 3.88
SDF2L1-201ENST00000248958 KDM6BO15054 1643 aa39.27■■■■□ 3.88
SDF2L1-201ENST00000248958 CD109Q6YHK3 1445 aa39.27■■■■□ 3.88
SDF2L1-201ENST00000248958 ATP1B4Q9UN42 357 aaPredicted RBP39.26■■■■□ 3.88
SDF2L1-201ENST00000248958 ABCA9Q8IUA7 1624 aa39.24■■■■□ 3.87
SDF2L1-201ENST00000248958 MAGI3Q5TCQ9 1506 aa39.24■■■■□ 3.87
SDF2L1-201ENST00000248958 CDK13Q14004 1512 aaKnown RBP39.22■■■■□ 3.87
SDF2L1-201ENST00000248958 CASKIN1Q8WXD9 1431 aa39.21■■■■□ 3.87
SDF2L1-201ENST00000248958 AEBP2Q6ZN18 517 aaPredicted RBP39.18■■■■□ 3.86
SDF2L1-201ENST00000248958 CEP162Q5TB80 1403 aa39.17■■■■□ 3.86
SDF2L1-201ENST00000248958 PCF11O94913 1555 aaKnown RBP39.16■■■■□ 3.86
SDF2L1-201ENST00000248958 CDK11AQ9UQ88 783 aaPredicted RBP39.15■■■■□ 3.86
SDF2L1-201ENST00000248958 LOC105371045A0A1W2PR82 267 aa39.13■■■■□ 3.85
SDF2L1-201ENST00000248958 FYCO1Q9BQS8 1478 aa39.12■■■■□ 3.85
SDF2L1-201ENST00000248958 LRRIQ1Q96JM4 1722 aa39.11■■■■□ 3.85
SDF2L1-201ENST00000248958 CCDC18Q5T9S5 1454 aa39.11■■■■□ 3.85
SDF2L1-201ENST00000248958 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.01■■■■□ 3.847e-15■■■■□ 22.7
SDF2L1-201ENST00000248958 PHLDB1Q86UU1 1377 aa38.99■■■■□ 3.83
SDF2L1-201ENST00000248958 TROQ12816 1431 aaPredicted RBP38.97■■■■□ 3.83
SDF2L1-201ENST00000248958 COL17A1Q9UMD9 1497 aaPredicted RBP38.95■■■■□ 3.83
SDF2L1-201ENST00000248958 NEO1Q92859 1461 aa38.93■■■■□ 3.82
SDF2L1-201ENST00000248958 KIF14Q15058 1648 aa38.92■■■■□ 3.82
SDF2L1-201ENST00000248958 TTC37Q6PGP7 1564 aa38.92■■■■□ 3.82
SDF2L1-201ENST00000248958 ARAP3Q8WWN8 1544 aa38.89■■■■□ 3.82
SDF2L1-201ENST00000248958 CFAP74Q9C0B2 1584 aa38.87■■■■□ 3.81
SDF2L1-201ENST00000248958 MYO5CQ9NQX4 1742 aa38.82■■■■□ 3.8
SDF2L1-201ENST00000248958 PLCH2O75038 1416 aa38.8■■■■□ 3.8
SDF2L1-201ENST00000248958 FANCAO15360 1455 aa38.79■■■■□ 3.8
SDF2L1-201ENST00000248958 VPS8Q8N3P4 1428 aa38.74■■■■□ 3.79
SDF2L1-201ENST00000248958 AKNAQ7Z591 1439 aa38.73■■■■□ 3.79
SDF2L1-201ENST00000248958 EFCAB2Q5VUJ9 269 aa38.67■■■■□ 3.78
SDF2L1-201ENST00000248958 MTUS2Q5JR59 1369 aa38.65■■■■□ 3.78
SDF2L1-201ENST00000248958 DENND4BO75064 1496 aaPredicted RBP38.64■■■■□ 3.78
SDF2L1-201ENST00000248958 ARHGAP5Q13017 1502 aa38.61■■■■□ 3.77
SDF2L1-201ENST00000248958 PREX2Q70Z35 1606 aa38.6■■■■□ 3.77
SDF2L1-201ENST00000248958 CDC42BPBQ9Y5S2 1711 aa38.6■■■■□ 3.77
SDF2L1-201ENST00000248958 EHBP1L1Q8N3D4 1523 aa38.59■■■■□ 3.77
SDF2L1-201ENST00000248958 RAPGEF3O95398 923 aa38.59■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms