RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 PRG4Q92954 1404 aaPredicted RBP36.12■■■■□ 3.37
HCFC1R1-201ENST00000248089 JPH4Q96JJ6 628 aa36.09■■■■□ 3.37
HCFC1R1-201ENST00000248089 KIAA0586Q9BVV6 1533 aa36.06■■■■□ 3.36
HCFC1R1-201ENST00000248089 TRHP20396 242 aaPredicted RBP36.01■■■■□ 3.36
HCFC1R1-201ENST00000248089 RAPGEF2Q9Y4G8 1499 aa35.92■■■■□ 3.34
HCFC1R1-201ENST00000248089 IQGAP2Q13576 1575 aa35.89■■■■□ 3.34
HCFC1R1-201ENST00000248089 CTTNBP2Q8WZ74 1663 aa35.75■■■■□ 3.31
HCFC1R1-201ENST00000248089 CARMIL2Q6F5E8 1435 aa35.71■■■■□ 3.31
HCFC1R1-201ENST00000248089 ADCY10Q96PN6 1610 aa35.7■■■■□ 3.31
HCFC1R1-201ENST00000248089 PRXQ9BXM0 1461 aa35.67■■■■□ 3.3
HCFC1R1-201ENST00000248089 TTBK1Q5TCY1 1321 aaPredicted RBP35.65■■■■□ 3.3
HCFC1R1-201ENST00000248089 UGGT2Q9NYU1 1516 aa35.62■■■■□ 3.29
HCFC1R1-201ENST00000248089 PTPRGP23470 1445 aa35.61■■■■□ 3.29
HCFC1R1-201ENST00000248089 DISP1Q96F81 1524 aa35.61■■■■□ 3.29
HCFC1R1-201ENST00000248089 TNIKQ9UKE5 1360 aa35.61■■■■□ 3.29
HCFC1R1-201ENST00000248089 KIAA0556O60303 1618 aa35.56■■■■□ 3.28
HCFC1R1-201ENST00000248089 NPM1P06748 294 aaKnown RBP eCLIP35.55■■■■□ 3.28
HCFC1R1-201ENST00000248089 KIF13AQ9H1H9 1805 aa35.54■■■■□ 3.28
HCFC1R1-201ENST00000248089 CSRNP3Q8WYN3 585 aa35.5■■■■□ 3.27
HCFC1R1-201ENST00000248089 EEA1Q15075 1411 aa35.49■■■■□ 3.27
HCFC1R1-201ENST00000248089 MAPKBP1O60336 1514 aa35.49■■■■□ 3.27
HCFC1R1-201ENST00000248089 FAM9AQ8IZU1 332 aaPredicted RBP35.41■■■■□ 3.26
HCFC1R1-201ENST00000248089 GOLGA3Q08378 1498 aa35.4■■■■□ 3.26
HCFC1R1-201ENST00000248089 ABCC2Q92887 1545 aa35.38■■■■□ 3.25
HCFC1R1-201ENST00000248089 CHIC1Q5VXU3 224 aa35.37■■■■□ 3.25
HCFC1R1-201ENST00000248089 UACAQ9BZF9 1416 aa35.37■■■■□ 3.25
HCFC1R1-201ENST00000248089 DIP2BQ9P265 1576 aa35.37■■■■□ 3.25
HCFC1R1-201ENST00000248089 ABCC10Q5T3U5 1492 aa35.35■■■■□ 3.25
HCFC1R1-201ENST00000248089 UHRF1BP1LA0JNW5 1464 aa35.35■■■■□ 3.25
HCFC1R1-201ENST00000248089 FAM69CQ0P6D2 419 aa35.29■■■■□ 3.24
HCFC1R1-201ENST00000248089 KIF21BO75037 1637 aa35.26■■■■□ 3.24
HCFC1R1-201ENST00000248089 ZCCHC11Q5TAX3 1644 aaKnown RBP35.24■■■■□ 3.23
HCFC1R1-201ENST00000248089 PLB1Q6P1J6 1458 aa35.21■■■■□ 3.23
HCFC1R1-201ENST00000248089 TSPOAP1O95153 1857 aa35.2■■■■□ 3.22
HCFC1R1-201ENST00000248089 ASXL2Q76L83 1435 aa35.19■■■■□ 3.22
HCFC1R1-201ENST00000248089 KDM5BQ9UGL1 1544 aa35.19■■■■□ 3.22
HCFC1R1-201ENST00000248089 SAMD9Q5K651 1589 aa35.17■■■■□ 3.22
HCFC1R1-201ENST00000248089 ABCA8O94911 1581 aa35.16■■■■□ 3.22
HCFC1R1-201ENST00000248089 P3H3Q8IVL6 736 aa35.14■■■■□ 3.22
HCFC1R1-201ENST00000248089 RANGAP1P46060 587 aaPredicted RBP35.09■■■■□ 3.21
HCFC1R1-201ENST00000248089 EHMT2Q96KQ7 1210 aa35.05■■■■□ 3.2
HCFC1R1-201ENST00000248089 GLI2P10070 1586 aa35.03■■■■□ 3.2
HCFC1R1-201ENST00000248089 EPRSP07814 1512 aaKnown RBP34.99■■■■□ 3.19
HCFC1R1-201ENST00000248089 WDR7Q9Y4E6 1490 aa34.97■■■■□ 3.19
HCFC1R1-201ENST00000248089 RAPGEF6Q8TEU7 1601 aa34.95■■■■□ 3.18
HCFC1R1-201ENST00000248089 PPRC1Q5VV67 1664 aaKnown RBP34.95■■■■□ 3.18
HCFC1R1-201ENST00000248089 FHOD3Q2V2M9 1422 aa34.94■■■■□ 3.18
HCFC1R1-201ENST00000248089 KDM6BO15054 1643 aa34.93■■■■□ 3.18
HCFC1R1-201ENST00000248089 EFCAB5A4FU69 1503 aa34.93■■■■□ 3.18
HCFC1R1-201ENST00000248089 MAP3K4Q9Y6R4 1608 aa34.92■■■■□ 3.18
HCFC1R1-201ENST00000248089 UBTFP17480 764 aaKnown RBP34.91■■■■□ 3.18
HCFC1R1-201ENST00000248089 ARID3CA6NKF2 412 aa34.9■■■■□ 3.18
HCFC1R1-201ENST00000248089 ATP10BO94823 1461 aa34.82■■■■□ 3.16
HCFC1R1-201ENST00000248089 CFAP43Q8NDM7 1665 aa34.77■■■■□ 3.16
HCFC1R1-201ENST00000248089 KCNH8Q96L42 1107 aa34.77■■■■□ 3.16
HCFC1R1-201ENST00000248089 NUP153P49790 1475 aaKnown RBP34.75■■■■□ 3.15
HCFC1R1-201ENST00000248089 TEX14Q8IWB6 1497 aa34.74■■■■□ 3.15
HCFC1R1-201ENST00000248089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.7■■■■□ 3.15
HCFC1R1-201ENST00000248089 HNRNPUL2Q1KMD3 747 aaKnown RBP34.7■■■■□ 3.15
HCFC1R1-201ENST00000248089 ARHGAP35Q9NRY4 1499 aa34.67■■■■□ 3.14
HCFC1R1-201ENST00000248089 CD109Q6YHK3 1445 aa34.66■■■■□ 3.14
HCFC1R1-201ENST00000248089 MAGI3Q5TCQ9 1506 aa34.6■■■■□ 3.13
HCFC1R1-201ENST00000248089 ABCA9Q8IUA7 1624 aa34.59■■■■□ 3.13
HCFC1R1-201ENST00000248089 FMN1Q68DA7 1419 aa34.56■■■■□ 3.12
HCFC1R1-201ENST00000248089 COL17A1Q9UMD9 1497 aaPredicted RBP34.55■■■■□ 3.12
HCFC1R1-201ENST00000248089 HECW1Q76N89 1606 aa34.54■■■■□ 3.12
HCFC1R1-201ENST00000248089 CDK13Q14004 1512 aaKnown RBP34.53■■■■□ 3.12
HCFC1R1-201ENST00000248089 AEBP2Q6ZN18 517 aaPredicted RBP34.5■■■■□ 3.11
HCFC1R1-201ENST00000248089 ATP1B4Q9UN42 357 aaPredicted RBP34.48■■■■□ 3.11
HCFC1R1-201ENST00000248089 PLEKHD1A6NEE1 506 aa34.45■■■■□ 3.11
HCFC1R1-201ENST00000248089 LRRIQ1Q96JM4 1722 aa34.39■■■■□ 3.1
HCFC1R1-201ENST00000248089 PCF11O94913 1555 aaKnown RBP34.36■■■■□ 3.09
HCFC1R1-201ENST00000248089 TTC37Q6PGP7 1564 aa34.36■■■■□ 3.09
HCFC1R1-201ENST00000248089 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.35■■■■□ 3.09
HCFC1R1-201ENST00000248089 CLIP1P30622 1438 aa34.33■■■■□ 3.09
HCFC1R1-201ENST00000248089 ARAP3Q8WWN8 1544 aa34.31■■■■□ 3.08
HCFC1R1-201ENST00000248089 NEO1Q92859 1461 aa34.29■■■■□ 3.08
HCFC1R1-201ENST00000248089 CFAP74Q9C0B2 1584 aa34.25■■■■□ 3.07
HCFC1R1-201ENST00000248089 CASKIN1Q8WXD9 1431 aa34.25■■■■□ 3.07
HCFC1R1-201ENST00000248089 PHLDB1Q86UU1 1377 aa34.24■■■■□ 3.07
HCFC1R1-201ENST00000248089 KIF14Q15058 1648 aa34.22■■■■□ 3.07
HCFC1R1-201ENST00000248089 CDK11AQ9UQ88 783 aaPredicted RBP34.22■■■■□ 3.07
HCFC1R1-201ENST00000248089 CCDC18Q5T9S5 1454 aa34.2■■■■□ 3.06
HCFC1R1-201ENST00000248089 FYCO1Q9BQS8 1478 aa34.2■■■■□ 3.06
HCFC1R1-201ENST00000248089 MYO5CQ9NQX4 1742 aa34.19■■■■□ 3.06
HCFC1R1-201ENST00000248089 FANCAO15360 1455 aa34.19■■■■□ 3.06
HCFC1R1-201ENST00000248089 KDM4FA0A1W2PPD8 638 aa34.18■■■■□ 3.06
HCFC1R1-201ENST00000248089 TROQ12816 1431 aaPredicted RBP34.17■■■■□ 3.06
HCFC1R1-201ENST00000248089 ADGRL1O94910 1474 aa34.16■■■■□ 3.06
HCFC1R1-201ENST00000248089 FRMPD1Q5SYB0 1578 aa34.15■■■■□ 3.06
HCFC1R1-201ENST00000248089 RAPGEF3O95398 923 aa34.13■■■■□ 3.05
HCFC1R1-201ENST00000248089 AKNAQ7Z591 1439 aa34.12■■■■□ 3.05
HCFC1R1-201ENST00000248089 CEP162Q5TB80 1403 aa34.1■■■■□ 3.05
HCFC1R1-201ENST00000248089 RICTORQ6R327 1708 aa34.1■■■■□ 3.05
HCFC1R1-201ENST00000248089 PLCH2O75038 1416 aa34.07■■■■□ 3.04
HCFC1R1-201ENST00000248089 DENND4BO75064 1496 aaPredicted RBP34.06■■■■□ 3.04
HCFC1R1-201ENST00000248089 ARHGAP5Q13017 1502 aa33.99■■■■□ 3.03
HCFC1R1-201ENST00000248089 CDC42BPBQ9Y5S2 1711 aa33.96■■■■□ 3.03
HCFC1R1-201ENST00000248089 LOC105371045A0A1W2PR82 267 aa33.96■■■■□ 3.03
HCFC1R1-201ENST00000248089 ARHGEF40Q8TER5 1519 aa33.95■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms