RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 SIN3AQ96ST3 1273 aa17.55■□□□□ 0.4
NR1D1-201ENST00000246672 PPP1R15AO75807 674 aaPredicted RBP17.55■□□□□ 0.4
NR1D1-201ENST00000246672 BIVM-ERCC5R4GMW8 1640 aa17.54■□□□□ 0.4
NR1D1-201ENST00000246672 HIRIP3Q9BW71 556 aaPredicted RBP17.53■□□□□ 0.4
NR1D1-201ENST00000246672 ARHGAP35Q9NRY4 1499 aa17.51■□□□□ 0.39
NR1D1-201ENST00000246672 CCER2I3L3R5 266 aa17.5■□□□□ 0.39
NR1D1-201ENST00000246672 CDK11AQ9UQ88 783 aaPredicted RBP17.49■□□□□ 0.39
NR1D1-201ENST00000246672 SETD5Q9C0A6 1442 aa17.49■□□□□ 0.39
NR1D1-201ENST00000246672 ANP32CO43423 234 aa17.46■□□□□ 0.39
NR1D1-201ENST00000246672 DEKP35659 375 aaKnown RBP17.46■□□□□ 0.39
NR1D1-201ENST00000246672 IRX6P78412 446 aaPredicted RBP17.45■□□□□ 0.38
NR1D1-201ENST00000246672 KIF27Q86VH2 1401 aa17.43■□□□□ 0.38
NR1D1-201ENST00000246672 MYT1LQ9UL68 1186 aa17.42■□□□□ 0.38
NR1D1-201ENST00000246672 FAM50AQ14320 339 aaKnown RBP17.4■□□□□ 0.38
NR1D1-201ENST00000246672 CUX1P39880 1505 aa17.4■□□□□ 0.38
NR1D1-201ENST00000246672 TIAM1Q13009 1591 aa17.39■□□□□ 0.37
NR1D1-201ENST00000246672 PHLDB1Q86UU1 1377 aa17.38■□□□□ 0.37
NR1D1-201ENST00000246672 TIMELESSQ9UNS1 1208 aa17.36■□□□□ 0.37
NR1D1-201ENST00000246672 LRRC9Q6ZRR7 1453 aa17.34■□□□□ 0.37
NR1D1-201ENST00000246672 HNRNPUQ00839 825 aaKnown RBP eCLIP17.33■□□□□ 0.36
NR1D1-201ENST00000246672 MAP3K1Q13233 1512 aa17.32■□□□□ 0.36
NR1D1-201ENST00000246672 ANO8Q9HCE9 1232 aaPredicted RBP17.3■□□□□ 0.36
NR1D1-201ENST00000246672 NBR1Q14596 966 aa17.27■□□□□ 0.36
NR1D1-201ENST00000246672 PPP4R2Q9NY27 417 aa17.27■□□□□ 0.35
NR1D1-201ENST00000246672 ATP1B4Q9UN42 357 aaPredicted RBP17.24■□□□□ 0.35
NR1D1-201ENST00000246672 TONSLQ96HA7 1378 aa17.24■□□□□ 0.35
NR1D1-201ENST00000246672 NOP58Q9Y2X3 529 aaKnown RBP17.23■□□□□ 0.35
NR1D1-201ENST00000246672 ERICH6BQ5W0A0 696 aa17.23■□□□□ 0.35
NR1D1-201ENST00000246672 IGF1RP08069 1367 aa17.23■□□□□ 0.35
NR1D1-201ENST00000246672 PAK3O75914 559 aaPredicted RBP17.23■□□□□ 0.35
NR1D1-201ENST00000246672 P3H3Q8IVL6 736 aa17.22■□□□□ 0.35
NR1D1-201ENST00000246672 B4GALNT3Q6L9W6 998 aa17.22■□□□□ 0.35
NR1D1-201ENST00000246672 CFAP43Q8NDM7 1665 aa17.19■□□□□ 0.34
NR1D1-201ENST00000246672 PCF11O94913 1555 aaKnown RBP17.18■□□□□ 0.34
NR1D1-201ENST00000246672 FHAD1B1AJZ9 1412 aa17.17■□□□□ 0.34
NR1D1-201ENST00000246672 CARMIL1Q5VZK9 1371 aa17.17■□□□□ 0.34
NR1D1-201ENST00000246672 SALL2Q9Y467 1007 aaPredicted RBP17.16■□□□□ 0.34
NR1D1-201ENST00000246672 CFTRP13569 1480 aa17.13■□□□□ 0.33
NR1D1-201ENST00000246672 CCDC18Q5T9S5 1454 aa17.12■□□□□ 0.33
NR1D1-201ENST00000246672 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.1■□□□□ 0.33
NR1D1-201ENST00000246672 CCDC184Q52MB2 194 aa17.1■□□□□ 0.33
NR1D1-201ENST00000246672 WASHC2AQ641Q2 1341 aa17.09■□□□□ 0.33
NR1D1-201ENST00000246672 FHOD3Q2V2M9 1422 aa17.09■□□□□ 0.33
NR1D1-201ENST00000246672 HMGXB3Q12766 1538 aa17.08■□□□□ 0.33
NR1D1-201ENST00000246672 UACAQ9BZF9 1416 aa17.08■□□□□ 0.32
NR1D1-201ENST00000246672 NCAPD3P42695 1498 aa17.08■□□□□ 0.32
NR1D1-201ENST00000246672 PTPRKQ15262 1439 aa17.06■□□□□ 0.32
NR1D1-201ENST00000246672 HSPA5P11021 654 aaKnown RBP17.06■□□□□ 0.32
NR1D1-201ENST00000246672 IL27Q8NEV9 243 aa17.06■□□□□ 0.32
NR1D1-201ENST00000246672 KDM5BQ9UGL1 1544 aa17.06■□□□□ 0.32
NR1D1-201ENST00000246672 FGD6Q6ZV73 1430 aa17.06■□□□□ 0.32
NR1D1-201ENST00000246672 RTL5Q5HYW3 569 aaPredicted RBP17.05■□□□□ 0.32
NR1D1-201ENST00000246672 HFM1A2PYH4 1435 aa17.04■□□□□ 0.32
NR1D1-201ENST00000246672 FYCO1Q9BQS8 1478 aa17.03■□□□□ 0.32
NR1D1-201ENST00000246672 PTPN23Q9H3S7 1636 aa17.03■□□□□ 0.32
NR1D1-201ENST00000246672 CCDC136Q96JN2 1154 aa17.03■□□□□ 0.32
NR1D1-201ENST00000246672 IPO9Q96P70 1041 aaKnown RBP17.03■□□□□ 0.32
NR1D1-201ENST00000246672 AQRO60306 1485 aaKnown RBP eCLIP17.03■□□□□ 0.323e-6■■■■□ 24.7
NR1D1-201ENST00000246672 FAM9BQ8IZU0 186 aa17.03■□□□□ 0.32
NR1D1-201ENST00000246672 FGD5Q6ZNL6 1462 aa17.02■□□□□ 0.31
NR1D1-201ENST00000246672 RTN4Q9NQC3 1192 aaKnown RBP17.01■□□□□ 0.31
NR1D1-201ENST00000246672 CASKIN1Q8WXD9 1431 aa17.01■□□□□ 0.31
NR1D1-201ENST00000246672 ANP32AP39687 249 aaKnown RBP17.01■□□□□ 0.31
NR1D1-201ENST00000246672 ZBTB47Q9UFB7 747 aaPredicted RBP17■□□□□ 0.31
NR1D1-201ENST00000246672 NAIPQ13075 1403 aa16.99■□□□□ 0.31
NR1D1-201ENST00000246672 CNTLNQ9NXG0 1405 aa16.98■□□□□ 0.31
NR1D1-201ENST00000246672 ZBED9Q6R2W3 1325 aa16.98■□□□□ 0.31
NR1D1-201ENST00000246672 EIF4G2P78344 907 aaKnown RBP eCLIP16.97■□□□□ 0.31
NR1D1-201ENST00000246672 MRS2Q9HD23 443 aa16.97■□□□□ 0.31
NR1D1-201ENST00000246672 NCOA2Q15596 1464 aa16.96■□□□□ 0.31
NR1D1-201ENST00000246672 PRKRIP1Q9H875 184 aaPredicted RBP16.96■□□□□ 0.31
NR1D1-201ENST00000246672 C11orf95C9JLR9 678 aaPredicted RBP16.95■□□□□ 0.3
NR1D1-201ENST00000246672 MTUS2Q5JR59 1369 aa16.95■□□□□ 0.3
NR1D1-201ENST00000246672 PRDM2Q13029 1718 aa16.94■□□□□ 0.3
NR1D1-201ENST00000246672 EFCAB5A4FU69 1503 aa16.93■□□□□ 0.3
NR1D1-201ENST00000246672 FMN1Q68DA7 1419 aa16.92■□□□□ 0.3
NR1D1-201ENST00000246672 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.92■□□□□ 0.3
NR1D1-201ENST00000246672 RRP7BPQ9NSQ0 103 aa16.91■□□□□ 0.3
NR1D1-201ENST00000246672 CCDC7Q96M83 1385 aa16.9■□□□□ 0.3
NR1D1-201ENST00000246672 AKNAQ7Z591 1439 aa16.89■□□□□ 0.29
NR1D1-201ENST00000246672 CHIC2Q9UKJ5 165 aa16.88■□□□□ 0.29
NR1D1-201ENST00000246672 MYOM3Q5VTT5 1437 aa16.88■□□□□ 0.29
NR1D1-201ENST00000246672 DENND4BO75064 1496 aaPredicted RBP16.88■□□□□ 0.29
NR1D1-201ENST00000246672 SNAPC4Q5SXM2 1469 aa16.88■□□□□ 0.29
NR1D1-201ENST00000246672 NCOA1Q15788 1441 aa16.87■□□□□ 0.29
NR1D1-201ENST00000246672 L3MBTL2Q969R5 705 aa16.86■□□□□ 0.29
NR1D1-201ENST00000246672 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
NR1D1-201ENST00000246672 LRRIQ1Q96JM4 1722 aa16.83■□□□□ 0.29
NR1D1-201ENST00000246672 FOXD1Q16676 465 aa16.83■□□□□ 0.28
NR1D1-201ENST00000246672 LAS1LQ9Y4W2 734 aaKnown RBP16.83■□□□□ 0.28
NR1D1-201ENST00000246672 RAD54L2Q9Y4B4 1467 aa16.83■□□□□ 0.28
NR1D1-201ENST00000246672 NEFMP07197 916 aa16.83■□□□□ 0.28
NR1D1-201ENST00000246672 NPM2Q86SE8 214 aaKnown RBP16.82■□□□□ 0.28
NR1D1-201ENST00000246672 SMG6Q86US8 1419 aaKnown RBP16.82■□□□□ 0.28
NR1D1-201ENST00000246672 CTTNBP2Q8WZ74 1663 aa16.82■□□□□ 0.28
NR1D1-201ENST00000246672 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
NR1D1-201ENST00000246672 RNF123Q5XPI4 1314 aa16.81■□□□□ 0.28
NR1D1-201ENST00000246672 HECW1Q76N89 1606 aa16.8■□□□□ 0.28
NR1D1-201ENST00000246672 MPHOSPH9Q99550 1183 aa16.8■□□□□ 0.28
NR1D1-201ENST00000246672 KIF7Q2M1P5 1343 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms