RNA–Protein interactions for RNA: ENST00000244709.8

TREM1-201, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TREM1, Length 1,690 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-201ENST00000244709 NUP160Q12769 1436 aa18.63■□□□□ 0.57
TREM1-201ENST00000244709 TNIKQ9UKE5 1360 aa18.63■□□□□ 0.57
TREM1-201ENST00000244709 IQGAP2Q13576 1575 aa18.57■□□□□ 0.56
TREM1-201ENST00000244709 KIAA0586Q9BVV6 1533 aa18.56■□□□□ 0.56
TREM1-201ENST00000244709 CLASP1Q7Z460 1538 aa18.53■□□□□ 0.56
TREM1-201ENST00000244709 CEP162Q5TB80 1403 aa18.51■□□□□ 0.55
TREM1-201ENST00000244709 RANGAP1P46060 587 aaPredicted RBP18.5■□□□□ 0.55
TREM1-201ENST00000244709 OSCARQ8IYS5 282 aa18.47■□□□□ 0.55
TREM1-201ENST00000244709 CLIP1P30622 1438 aa18.46■□□□□ 0.55
TREM1-201ENST00000244709 UGGT2Q9NYU1 1516 aa18.46■□□□□ 0.55
TREM1-201ENST00000244709 SHROOM2Q13796 1616 aa18.45■□□□□ 0.54
TREM1-201ENST00000244709 SAMD9Q5K651 1589 aa18.44■□□□□ 0.54
TREM1-201ENST00000244709 EFCAB5A4FU69 1503 aa18.42■□□□□ 0.54
TREM1-201ENST00000244709 ARHGAP35Q9NRY4 1499 aa18.42■□□□□ 0.54
TREM1-201ENST00000244709 JPH4Q96JJ6 628 aa18.42■□□□□ 0.54
TREM1-201ENST00000244709 KIAA0556O60303 1618 aa18.4■□□□□ 0.54
TREM1-201ENST00000244709 DISP1Q96F81 1524 aa18.4■□□□□ 0.54
TREM1-201ENST00000244709 PRG4Q92954 1404 aaPredicted RBP18.37■□□□□ 0.53
TREM1-201ENST00000244709 ARAP1Q96P48 1450 aa18.36■□□□□ 0.53
TREM1-201ENST00000244709 P3H3Q8IVL6 736 aa18.36■□□□□ 0.53
TREM1-201ENST00000244709 FHOD3Q2V2M9 1422 aa18.35■□□□□ 0.53
TREM1-201ENST00000244709 ERCC6L2Q5T890 1561 aa18.35■□□□□ 0.53
TREM1-201ENST00000244709 CARMIL2Q6F5E8 1435 aa18.33■□□□□ 0.52
TREM1-201ENST00000244709 VPS8Q8N3P4 1428 aa18.25■□□□□ 0.51
TREM1-201ENST00000244709 TTBK1Q5TCY1 1321 aaPredicted RBP18.24■□□□□ 0.51
TREM1-201ENST00000244709 ARHGEF11O15085 1522 aa18.23■□□□□ 0.51
TREM1-201ENST00000244709 FMN1Q68DA7 1419 aa18.23■□□□□ 0.51
TREM1-201ENST00000244709 PCF11O94913 1555 aaKnown RBP18.21■□□□□ 0.51
TREM1-201ENST00000244709 RIMBP3CA6NJZ7 1639 aa18.2■□□□□ 0.5
TREM1-201ENST00000244709 RIMBP3BA6NNM3 1639 aa18.2■□□□□ 0.5
TREM1-201ENST00000244709 RIMBP3Q9UFD9 1639 aa18.2■□□□□ 0.5
TREM1-201ENST00000244709 PTPRGP23470 1445 aa18.19■□□□□ 0.5
TREM1-201ENST00000244709 RAPGEF6Q8TEU7 1601 aa18.16■□□□□ 0.5
TREM1-201ENST00000244709 PLB1Q6P1J6 1458 aa18.15■□□□□ 0.5
TREM1-201ENST00000244709 CASKIN1Q8WXD9 1431 aa18.15■□□□□ 0.5
TREM1-201ENST00000244709 ABCA8O94911 1581 aa18.15■□□□□ 0.5
TREM1-201ENST00000244709 FYCO1Q9BQS8 1478 aa18.14■□□□□ 0.49
TREM1-201ENST00000244709 LRRIQ1Q96JM4 1722 aa18.13■□□□□ 0.49
TREM1-201ENST00000244709 HECW1Q76N89 1606 aa18.13■□□□□ 0.49
TREM1-201ENST00000244709 UACAQ9BZF9 1416 aa18.1■□□□□ 0.49
TREM1-201ENST00000244709 ATP1B4Q9UN42 357 aaPredicted RBP18.09■□□□□ 0.49
TREM1-201ENST00000244709 NUP153P49790 1475 aaKnown RBP18.08■□□□□ 0.49
TREM1-201ENST00000244709 ABCC2Q92887 1545 aa18.08■□□□□ 0.48
TREM1-201ENST00000244709 ADCY10Q96PN6 1610 aa18.06■□□□□ 0.48
TREM1-201ENST00000244709 CFAP43Q8NDM7 1665 aa18.05■□□□□ 0.48
TREM1-201ENST00000244709 UHRF1BP1LA0JNW5 1464 aa18.05■□□□□ 0.48
TREM1-201ENST00000244709 EPRSP07814 1512 aaKnown RBP18.04■□□□□ 0.48
TREM1-201ENST00000244709 TIAM1Q13009 1591 aa18.04■□□□□ 0.48
TREM1-201ENST00000244709 CDK13Q14004 1512 aaKnown RBP18.04■□□□□ 0.48
TREM1-201ENST00000244709 ARID3CA6NKF2 412 aa18.03■□□□□ 0.48
TREM1-201ENST00000244709 CCDC18Q5T9S5 1454 aa18.03■□□□□ 0.48
TREM1-201ENST00000244709 CYB5RLQ6IPT4 315 aa18.01■□□□□ 0.47
TREM1-201ENST00000244709 APLP2Q06481 763 aa18■□□□□ 0.47
TREM1-201ENST00000244709 MAP3K1Q13233 1512 aa18■□□□□ 0.47
TREM1-201ENST00000244709 DNAJC5Q9H3Z4 198 aa17.99■□□□□ 0.47
TREM1-201ENST00000244709 ATP10BO94823 1461 aa17.99■□□□□ 0.47
TREM1-201ENST00000244709 ZCCHC11Q5TAX3 1644 aaKnown RBP17.99■□□□□ 0.47
TREM1-201ENST00000244709 KDM5BQ9UGL1 1544 aa17.97■□□□□ 0.47
TREM1-201ENST00000244709 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.94■□□□□ 0.46
TREM1-201ENST00000244709 HNRNPUL2Q1KMD3 747 aaKnown RBP17.94■□□□□ 0.46
TREM1-201ENST00000244709 MAGI3Q5TCQ9 1506 aa17.94■□□□□ 0.46
TREM1-201ENST00000244709 PPARGC1BQ86YN6 1023 aaKnown RBP17.93■□□□□ 0.46
TREM1-201ENST00000244709 LRRC9Q6ZRR7 1453 aa17.93■□□□□ 0.46
TREM1-201ENST00000244709 KANK4Q5T7N3 995 aaPredicted RBP17.93■□□□□ 0.46
TREM1-201ENST00000244709 EHBP1L1Q8N3D4 1523 aa17.9■□□□□ 0.46
TREM1-201ENST00000244709 MTUS2Q5JR59 1369 aa17.88■□□□□ 0.45
TREM1-201ENST00000244709 CDK11AQ9UQ88 783 aaPredicted RBP17.87■□□□□ 0.45
TREM1-201ENST00000244709 NPM1P06748 294 aaKnown RBP eCLIP17.86■□□□□ 0.45
TREM1-201ENST00000244709 TROQ12816 1431 aaPredicted RBP17.86■□□□□ 0.45
TREM1-201ENST00000244709 SUPT6HQ7KZ85 1726 aaKnown RBP17.85■□□□□ 0.45
TREM1-201ENST00000244709 PLEKHD1A6NEE1 506 aa17.84■□□□□ 0.45
TREM1-201ENST00000244709 ASXL2Q76L83 1435 aa17.83■□□□□ 0.44
TREM1-201ENST00000244709 KIF14Q15058 1648 aa17.83■□□□□ 0.44
TREM1-201ENST00000244709 WDR7Q9Y4E6 1490 aa17.82■□□□□ 0.44
TREM1-201ENST00000244709 MAPKBP1O60336 1514 aa17.81■□□□□ 0.44
TREM1-201ENST00000244709 NCOA2Q15596 1464 aa17.79■□□□□ 0.44
TREM1-201ENST00000244709 KCNH8Q96L42 1107 aa17.75■□□□□ 0.43
TREM1-201ENST00000244709 TTC37Q6PGP7 1564 aa17.75■□□□□ 0.43
TREM1-201ENST00000244709 ABCC10Q5T3U5 1492 aa17.74■□□□□ 0.43
TREM1-201ENST00000244709 PHLDB1Q86UU1 1377 aa17.74■□□□□ 0.43
TREM1-201ENST00000244709 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.74■□□□□ 0.43
TREM1-201ENST00000244709 CDC42BPAQ5VT25 1732 aa17.71■□□□□ 0.43
TREM1-201ENST00000244709 ABCA9Q8IUA7 1624 aa17.7■□□□□ 0.42
TREM1-201ENST00000244709 ITSN2Q9NZM3 1697 aa17.7■□□□□ 0.42
TREM1-201ENST00000244709 MYO5CQ9NQX4 1742 aa17.69■□□□□ 0.42
TREM1-201ENST00000244709 CCNB3Q8WWL7 1395 aa17.69■□□□□ 0.42
TREM1-201ENST00000244709 DIP2BQ9P265 1576 aa17.69■□□□□ 0.42
TREM1-201ENST00000244709 MYOM3Q5VTT5 1437 aa17.68■□□□□ 0.42
TREM1-201ENST00000244709 GPATCH8Q9UKJ3 1502 aaKnown RBP17.67■□□□□ 0.42
TREM1-201ENST00000244709 PREX2Q70Z35 1606 aa17.67■□□□□ 0.42
TREM1-201ENST00000244709 CDC42BPBQ9Y5S2 1711 aa17.66■□□□□ 0.42
TREM1-201ENST00000244709 KIF13AQ9H1H9 1805 aa17.66■□□□□ 0.42
TREM1-201ENST00000244709 GLI2P10070 1586 aa17.65■□□□□ 0.42
TREM1-201ENST00000244709 FGD6Q6ZV73 1430 aa17.64■□□□□ 0.41
TREM1-201ENST00000244709 RRBP1Q9P2E9 1410 aaKnown RBP17.63■□□□□ 0.41
TREM1-201ENST00000244709 MAP3K4Q9Y6R4 1608 aa17.62■□□□□ 0.41
TREM1-201ENST00000244709 PTPN23Q9H3S7 1636 aa17.62■□□□□ 0.41
TREM1-201ENST00000244709 MIA2Q96PC5 1412 aa17.61■□□□□ 0.41
TREM1-201ENST00000244709 PLCH2O75038 1416 aa17.6■□□□□ 0.41
TREM1-201ENST00000244709 FAM69CQ0P6D2 419 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms