RNA–Protein interactions for RNA: ENST00000244520.9

SNRPC-201, Transcript of small nuclear ribonucleoprotein polypeptide C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPC, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPC-201ENST00000244520 PRG4Q92954 1404 aaPredicted RBP23.25■■□□□ 1.31
SNRPC-201ENST00000244520 SHROOM2Q13796 1616 aa23.25■■□□□ 1.31
SNRPC-201ENST00000244520 TRHP20396 242 aaPredicted RBP23.23■■□□□ 1.31
SNRPC-201ENST00000244520 TTBK1Q5TCY1 1321 aaPredicted RBP23.16■■□□□ 1.3
SNRPC-201ENST00000244520 KIAA0586Q9BVV6 1533 aa23.14■■□□□ 1.3
SNRPC-201ENST00000244520 RAPGEF2Q9Y4G8 1499 aa23.1■■□□□ 1.29
SNRPC-201ENST00000244520 FAM9AQ8IZU1 332 aaPredicted RBP23.06■■□□□ 1.28
SNRPC-201ENST00000244520 IQGAP2Q13576 1575 aa23.02■■□□□ 1.28
SNRPC-201ENST00000244520 CHIC1Q5VXU3 224 aa22.96■■□□□ 1.27
SNRPC-201ENST00000244520 PRXQ9BXM0 1461 aa22.94■■□□□ 1.26
SNRPC-201ENST00000244520 CSRNP3Q8WYN3 585 aa22.94■■□□□ 1.26
SNRPC-201ENST00000244520 EHMT2Q96KQ7 1210 aa22.93■■□□□ 1.26
SNRPC-201ENST00000244520 CARMIL2Q6F5E8 1435 aa22.92■■□□□ 1.26
SNRPC-201ENST00000244520 PTPRGP23470 1445 aa22.91■■□□□ 1.26
SNRPC-201ENST00000244520 ADCY10Q96PN6 1610 aa22.91■■□□□ 1.26
SNRPC-201ENST00000244520 DISP1Q96F81 1524 aa22.9■■□□□ 1.26
SNRPC-201ENST00000244520 CTTNBP2Q8WZ74 1663 aa22.89■■□□□ 1.25
SNRPC-201ENST00000244520 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.25
SNRPC-201ENST00000244520 NPM1P06748 294 aaKnown RBP eCLIP22.87■■□□□ 1.25
SNRPC-201ENST00000244520 RANGAP1P46060 587 aaPredicted RBP22.86■■□□□ 1.25
SNRPC-201ENST00000244520 UGGT2Q9NYU1 1516 aa22.84■■□□□ 1.25
SNRPC-201ENST00000244520 KIAA0556O60303 1618 aa22.82■■□□□ 1.24
SNRPC-201ENST00000244520 P3H3Q8IVL6 736 aa22.82■■□□□ 1.24
SNRPC-201ENST00000244520 EEA1Q15075 1411 aa22.78■■□□□ 1.24
SNRPC-201ENST00000244520 FAM69CQ0P6D2 419 aa22.75■■□□□ 1.23
SNRPC-201ENST00000244520 KIF13AQ9H1H9 1805 aa22.74■■□□□ 1.23
SNRPC-201ENST00000244520 UACAQ9BZF9 1416 aa22.74■■□□□ 1.23
SNRPC-201ENST00000244520 ABCC2Q92887 1545 aa22.7■■□□□ 1.22
SNRPC-201ENST00000244520 MAPKBP1O60336 1514 aa22.69■■□□□ 1.22
SNRPC-201ENST00000244520 GOLGA3Q08378 1498 aa22.69■■□□□ 1.22
SNRPC-201ENST00000244520 PLB1Q6P1J6 1458 aa22.68■■□□□ 1.22
SNRPC-201ENST00000244520 ARID3CA6NKF2 412 aa22.68■■□□□ 1.22
SNRPC-201ENST00000244520 ABCC10Q5T3U5 1492 aa22.67■■□□□ 1.22
SNRPC-201ENST00000244520 DIP2BQ9P265 1576 aa22.66■■□□□ 1.22
SNRPC-201ENST00000244520 UHRF1BP1LA0JNW5 1464 aa22.65■■□□□ 1.22
SNRPC-201ENST00000244520 KIF21BO75037 1637 aa22.63■■□□□ 1.21
SNRPC-201ENST00000244520 ASXL2Q76L83 1435 aa22.63■■□□□ 1.21
SNRPC-201ENST00000244520 UBTFP17480 764 aaKnown RBP22.61■■□□□ 1.21
SNRPC-201ENST00000244520 ZCCHC11Q5TAX3 1644 aaKnown RBP22.6■■□□□ 1.21
SNRPC-201ENST00000244520 TSPOAP1O95153 1857 aa22.6■■□□□ 1.21
SNRPC-201ENST00000244520 KDM5BQ9UGL1 1544 aa22.57■■□□□ 1.2
SNRPC-201ENST00000244520 SAMD9Q5K651 1589 aa22.57■■□□□ 1.2
SNRPC-201ENST00000244520 FHOD3Q2V2M9 1422 aa22.57■■□□□ 1.2
SNRPC-201ENST00000244520 ABCA8O94911 1581 aa22.56■■□□□ 1.2
SNRPC-201ENST00000244520 KCNH8Q96L42 1107 aa22.5■■□□□ 1.19
SNRPC-201ENST00000244520 EPRSP07814 1512 aaKnown RBP22.47■■□□□ 1.19
SNRPC-201ENST00000244520 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.45■■□□□ 1.18
SNRPC-201ENST00000244520 HNRNPUL2Q1KMD3 747 aaKnown RBP22.45■■□□□ 1.18
SNRPC-201ENST00000244520 WDR7Q9Y4E6 1490 aa22.44■■□□□ 1.18
SNRPC-201ENST00000244520 RAPGEF6Q8TEU7 1601 aa22.43■■□□□ 1.18
SNRPC-201ENST00000244520 ATP10BO94823 1461 aa22.41■■□□□ 1.18
SNRPC-201ENST00000244520 GLI2P10070 1586 aa22.41■■□□□ 1.18
SNRPC-201ENST00000244520 PPRC1Q5VV67 1664 aaKnown RBP22.39■■□□□ 1.18
SNRPC-201ENST00000244520 EFCAB5A4FU69 1503 aa22.38■■□□□ 1.17
SNRPC-201ENST00000244520 ATP1B4Q9UN42 357 aaPredicted RBP22.38■■□□□ 1.17
SNRPC-201ENST00000244520 KDM6BO15054 1643 aa22.38■■□□□ 1.17
SNRPC-201ENST00000244520 NUP153P49790 1475 aaKnown RBP22.36■■□□□ 1.17
SNRPC-201ENST00000244520 MAP3K4Q9Y6R4 1608 aa22.35■■□□□ 1.17
SNRPC-201ENST00000244520 ARHGAP35Q9NRY4 1499 aa22.34■■□□□ 1.17
SNRPC-201ENST00000244520 CD109Q6YHK3 1445 aa22.29■■□□□ 1.16
SNRPC-201ENST00000244520 CDK13Q14004 1512 aaKnown RBP22.26■■□□□ 1.15
SNRPC-201ENST00000244520 COL17A1Q9UMD9 1497 aaPredicted RBP22.26■■□□□ 1.15
SNRPC-201ENST00000244520 TEX14Q8IWB6 1497 aa22.23■■□□□ 1.15
SNRPC-201ENST00000244520 CFAP43Q8NDM7 1665 aa22.23■■□□□ 1.15
SNRPC-201ENST00000244520 PLEKHD1A6NEE1 506 aa22.2■■□□□ 1.14
SNRPC-201ENST00000244520 FMN1Q68DA7 1419 aa22.2■■□□□ 1.14
SNRPC-201ENST00000244520 AEBP2Q6ZN18 517 aaPredicted RBP22.18■■□□□ 1.14
SNRPC-201ENST00000244520 MAGI3Q5TCQ9 1506 aa22.16■■□□□ 1.14
SNRPC-201ENST00000244520 HECW1Q76N89 1606 aa22.16■■□□□ 1.14
SNRPC-201ENST00000244520 CLIP1P30622 1438 aa22.15■■□□□ 1.14
SNRPC-201ENST00000244520 LOC105371045A0A1W2PR82 267 aa22.15■■□□□ 1.14
SNRPC-201ENST00000244520 ABCA9Q8IUA7 1624 aa22.15■■□□□ 1.14
SNRPC-201ENST00000244520 PCF11O94913 1555 aaKnown RBP22.12■■□□□ 1.13
SNRPC-201ENST00000244520 LRRIQ1Q96JM4 1722 aa22.11■■□□□ 1.13
SNRPC-201ENST00000244520 TTC37Q6PGP7 1564 aa22.08■■□□□ 1.13
SNRPC-201ENST00000244520 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.08■■□□□ 1.138e-6■□□□□ 8.1
SNRPC-201ENST00000244520 RAPGEF3O95398 923 aa22.05■■□□□ 1.12
SNRPC-201ENST00000244520 KDM4FA0A1W2PPD8 638 aa22.03■■□□□ 1.12
SNRPC-201ENST00000244520 CASKIN1Q8WXD9 1431 aa22.03■■□□□ 1.12
SNRPC-201ENST00000244520 KIF14Q15058 1648 aa22.02■■□□□ 1.12
SNRPC-201ENST00000244520 CEP162Q5TB80 1403 aa22.02■■□□□ 1.12
SNRPC-201ENST00000244520 CDK11AQ9UQ88 783 aaPredicted RBP22■■□□□ 1.11
SNRPC-201ENST00000244520 FANCAO15360 1455 aa21.97■■□□□ 1.11
SNRPC-201ENST00000244520 ARAP3Q8WWN8 1544 aa21.97■■□□□ 1.11
SNRPC-201ENST00000244520 TROQ12816 1431 aaPredicted RBP21.97■■□□□ 1.11
SNRPC-201ENST00000244520 NEO1Q92859 1461 aa21.96■■□□□ 1.11
SNRPC-201ENST00000244520 AKNAQ7Z591 1439 aa21.96■■□□□ 1.11
SNRPC-201ENST00000244520 FYCO1Q9BQS8 1478 aa21.96■■□□□ 1.11
SNRPC-201ENST00000244520 CCDC18Q5T9S5 1454 aa21.93■■□□□ 1.1
SNRPC-201ENST00000244520 ADGRL1O94910 1474 aa21.92■■□□□ 1.1
SNRPC-201ENST00000244520 FRMPD1Q5SYB0 1578 aa21.91■■□□□ 1.1
SNRPC-201ENST00000244520 PLCH2O75038 1416 aa21.9■■□□□ 1.1
SNRPC-201ENST00000244520 MYO5CQ9NQX4 1742 aa21.89■■□□□ 1.1
SNRPC-201ENST00000244520 PHLDB1Q86UU1 1377 aa21.89■■□□□ 1.1
SNRPC-201ENST00000244520 DENND4BO75064 1496 aaPredicted RBP21.89■■□□□ 1.09
SNRPC-201ENST00000244520 CFAP74Q9C0B2 1584 aa21.87■■□□□ 1.09
SNRPC-201ENST00000244520 ARHGAP5Q13017 1502 aa21.86■■□□□ 1.09
SNRPC-201ENST00000244520 SCAPERQ9BY12 1400 aa21.85■■□□□ 1.09
SNRPC-201ENST00000244520 EFCAB2Q5VUJ9 269 aa21.84■■□□□ 1.09
SNRPC-201ENST00000244520 RICTORQ6R327 1708 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms