RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 RAPGEF2Q9Y4G8 1499 aa19.83■□□□□ 0.77
SNAI1-201ENST00000244050 PRXQ9BXM0 1461 aa19.81■□□□□ 0.76
SNAI1-201ENST00000244050 ERICH3Q5RHP9 1530 aa19.81■□□□□ 0.76
SNAI1-201ENST00000244050 ABCA10Q8WWZ4 1543 aa19.81■□□□□ 0.76
SNAI1-201ENST00000244050 CEP162Q5TB80 1403 aa19.81■□□□□ 0.76
SNAI1-201ENST00000244050 PBRM1Q86U86 1689 aa19.8■□□□□ 0.76
SNAI1-201ENST00000244050 ABCA5Q8WWZ7 1642 aa19.79■□□□□ 0.76
SNAI1-201ENST00000244050 ZEB1P37275 1124 aaPredicted RBP19.74■□□□□ 0.75
SNAI1-201ENST00000244050 IGF1RP08069 1367 aa19.73■□□□□ 0.75
SNAI1-201ENST00000244050 PPARGC1BQ86YN6 1023 aaKnown RBP19.72■□□□□ 0.75
SNAI1-201ENST00000244050 GRIN2AQ12879 1464 aa19.67■□□□□ 0.74
SNAI1-201ENST00000244050 CARMIL1Q5VZK9 1371 aa19.66■□□□□ 0.74
SNAI1-201ENST00000244050 ERCC6L2Q5T890 1561 aa19.65■□□□□ 0.74
SNAI1-201ENST00000244050 CUL7Q14999 1698 aa19.65■□□□□ 0.74
SNAI1-201ENST00000244050 ADAMTS12P58397 1594 aa19.64■□□□□ 0.73
SNAI1-201ENST00000244050 CLIP1P30622 1438 aa19.64■□□□□ 0.73
SNAI1-201ENST00000244050 NUP160Q12769 1436 aa19.63■□□□□ 0.73
SNAI1-201ENST00000244050 CEP170Q5SW79 1584 aa19.61■□□□□ 0.73
SNAI1-201ENST00000244050 FHAD1B1AJZ9 1412 aa19.57■□□□□ 0.72
SNAI1-201ENST00000244050 RANGAP1P46060 587 aaPredicted RBP19.56■□□□□ 0.72
SNAI1-201ENST00000244050 SHROOM2Q13796 1616 aa19.54■□□□□ 0.72
SNAI1-201ENST00000244050 CTTNBP2Q8WZ74 1663 aa19.48■□□□□ 0.71
SNAI1-201ENST00000244050 VPS8Q8N3P4 1428 aa19.47■□□□□ 0.71
SNAI1-201ENST00000244050 PRG4Q92954 1404 aaPredicted RBP19.42■□□□□ 0.7
SNAI1-201ENST00000244050 ARHGAP35Q9NRY4 1499 aa19.41■□□□□ 0.7
SNAI1-201ENST00000244050 JPH4Q96JJ6 628 aa19.4■□□□□ 0.7
SNAI1-201ENST00000244050 KIF13AQ9H1H9 1805 aa19.32■□□□□ 0.68
SNAI1-201ENST00000244050 AEBP2Q6ZN18 517 aaPredicted RBP19.32■□□□□ 0.68
SNAI1-201ENST00000244050 TTBK1Q5TCY1 1321 aaPredicted RBP19.32■□□□□ 0.68
SNAI1-201ENST00000244050 APLP2Q06481 763 aa19.31■□□□□ 0.68
SNAI1-201ENST00000244050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.3■□□□□ 0.68
SNAI1-201ENST00000244050 EFCAB5A4FU69 1503 aa19.3■□□□□ 0.68
SNAI1-201ENST00000244050 CCER1Q8TC90 406 aaPredicted RBP19.29■□□□□ 0.68
SNAI1-201ENST00000244050 KIAA0586Q9BVV6 1533 aa19.25■□□□□ 0.67
SNAI1-201ENST00000244050 ABCC10Q5T3U5 1492 aa19.23■□□□□ 0.67
SNAI1-201ENST00000244050 ADCY10Q96PN6 1610 aa19.23■□□□□ 0.67
SNAI1-201ENST00000244050 P3H3Q8IVL6 736 aa19.22■□□□□ 0.67
SNAI1-201ENST00000244050 MAPKBP1O60336 1514 aa19.22■□□□□ 0.67
SNAI1-201ENST00000244050 IQGAP2Q13576 1575 aa19.22■□□□□ 0.67
SNAI1-201ENST00000244050 SAMD9Q5K651 1589 aa19.22■□□□□ 0.67
SNAI1-201ENST00000244050 FHOD3Q2V2M9 1422 aa19.21■□□□□ 0.67
SNAI1-201ENST00000244050 FAM69CQ0P6D2 419 aa19.2■□□□□ 0.66
SNAI1-201ENST00000244050 DIP2BQ9P265 1576 aa19.18■□□□□ 0.66
SNAI1-201ENST00000244050 NPM1P06748 294 aaKnown RBP eCLIP19.17■□□□□ 0.66
SNAI1-201ENST00000244050 PCF11O94913 1555 aaKnown RBP19.16■□□□□ 0.66
SNAI1-201ENST00000244050 FMN1Q68DA7 1419 aa19.12■□□□□ 0.65
SNAI1-201ENST00000244050 TIAM1Q13009 1591 aa19.11■□□□□ 0.65
SNAI1-201ENST00000244050 FYCO1Q9BQS8 1478 aa19.11■□□□□ 0.65
SNAI1-201ENST00000244050 MAP3K1Q13233 1512 aa19.1■□□□□ 0.65
SNAI1-201ENST00000244050 UGGT2Q9NYU1 1516 aa19.09■□□□□ 0.65
SNAI1-201ENST00000244050 CFAP43Q8NDM7 1665 aa19.09■□□□□ 0.65
SNAI1-201ENST00000244050 PTPRGP23470 1445 aa19.09■□□□□ 0.65
SNAI1-201ENST00000244050 CASKIN1Q8WXD9 1431 aa19.08■□□□□ 0.64
SNAI1-201ENST00000244050 KANK4Q5T7N3 995 aaPredicted RBP19.07■□□□□ 0.64
SNAI1-201ENST00000244050 ATP1B4Q9UN42 357 aaPredicted RBP19.06■□□□□ 0.64
SNAI1-201ENST00000244050 HNRNPUL2Q1KMD3 747 aaKnown RBP19.04■□□□□ 0.64
SNAI1-201ENST00000244050 KIAA0556O60303 1618 aa19.02■□□□□ 0.64
SNAI1-201ENST00000244050 ABCC2Q92887 1545 aa19.02■□□□□ 0.63
SNAI1-201ENST00000244050 CARMIL2Q6F5E8 1435 aa19.02■□□□□ 0.63
SNAI1-201ENST00000244050 KDM6BO15054 1643 aa19.01■□□□□ 0.63
SNAI1-201ENST00000244050 DISP1Q96F81 1524 aa19■□□□□ 0.63
SNAI1-201ENST00000244050 TSPOAP1O95153 1857 aa19■□□□□ 0.63
SNAI1-201ENST00000244050 LRRC9Q6ZRR7 1453 aa19■□□□□ 0.63
SNAI1-201ENST00000244050 LRRIQ1Q96JM4 1722 aa18.99■□□□□ 0.63
SNAI1-201ENST00000244050 UHRF1BP1LA0JNW5 1464 aa18.98■□□□□ 0.63
SNAI1-201ENST00000244050 ASXL2Q76L83 1435 aa18.97■□□□□ 0.63
SNAI1-201ENST00000244050 RRBP1Q9P2E9 1410 aaKnown RBP18.97■□□□□ 0.63
SNAI1-201ENST00000244050 KDM4FA0A1W2PPD8 638 aa18.96■□□□□ 0.63
SNAI1-201ENST00000244050 HECW1Q76N89 1606 aa18.95■□□□□ 0.62
SNAI1-201ENST00000244050 UACAQ9BZF9 1416 aa18.95■□□□□ 0.62
SNAI1-201ENST00000244050 PLB1Q6P1J6 1458 aa18.94■□□□□ 0.62
SNAI1-201ENST00000244050 GLI2P10070 1586 aa18.94■□□□□ 0.62
SNAI1-201ENST00000244050 PPRC1Q5VV67 1664 aaKnown RBP18.93■□□□□ 0.62
SNAI1-201ENST00000244050 CCDC18Q5T9S5 1454 aa18.9■□□□□ 0.62
SNAI1-201ENST00000244050 KDM5BQ9UGL1 1544 aa18.9■□□□□ 0.62
SNAI1-201ENST00000244050 RAPGEF6Q8TEU7 1601 aa18.87■□□□□ 0.61
SNAI1-201ENST00000244050 MTUS2Q5JR59 1369 aa18.86■□□□□ 0.61
SNAI1-201ENST00000244050 EPRSP07814 1512 aaKnown RBP18.86■□□□□ 0.61
SNAI1-201ENST00000244050 CLSPNQ9HAW4 1339 aa18.85■□□□□ 0.61
SNAI1-201ENST00000244050 CCNB3Q8WWL7 1395 aa18.85■□□□□ 0.61
SNAI1-201ENST00000244050 COL17A1Q9UMD9 1497 aaPredicted RBP18.85■□□□□ 0.61
SNAI1-201ENST00000244050 EHBP1L1Q8N3D4 1523 aa18.83■□□□□ 0.61
SNAI1-201ENST00000244050 ZCCHC11Q5TAX3 1644 aaKnown RBP18.83■□□□□ 0.61
SNAI1-201ENST00000244050 MAP3K4Q9Y6R4 1608 aa18.83■□□□□ 0.6
SNAI1-201ENST00000244050 SUPT6HQ7KZ85 1726 aaKnown RBP18.82■□□□□ 0.6
SNAI1-201ENST00000244050 PHLDB1Q86UU1 1377 aa18.82■□□□□ 0.6
SNAI1-201ENST00000244050 CDK13Q14004 1512 aaKnown RBP18.81■□□□□ 0.6
SNAI1-201ENST00000244050 MAGI3Q5TCQ9 1506 aa18.78■□□□□ 0.6
SNAI1-201ENST00000244050 NUP153P49790 1475 aaKnown RBP18.78■□□□□ 0.6
SNAI1-201ENST00000244050 ZNF316A6NFI3 1004 aaPredicted RBP18.78■□□□□ 0.6
SNAI1-201ENST00000244050 DIEXFQ68CQ4 756 aaKnown RBP18.78■□□□□ 0.6
SNAI1-201ENST00000244050 DHX57Q6P158 1386 aaKnown RBP18.77■□□□□ 0.6
SNAI1-201ENST00000244050 ARID3CA6NKF2 412 aa18.76■□□□□ 0.59
SNAI1-201ENST00000244050 NCOA2Q15596 1464 aa18.75■□□□□ 0.59
SNAI1-201ENST00000244050 WDR7Q9Y4E6 1490 aa18.75■□□□□ 0.59
SNAI1-201ENST00000244050 TEX14Q8IWB6 1497 aa18.73■□□□□ 0.59
SNAI1-201ENST00000244050 ABCA8O94911 1581 aa18.73■□□□□ 0.59
SNAI1-201ENST00000244050 ADGRL1O94910 1474 aa18.73■□□□□ 0.59
SNAI1-201ENST00000244050 FGD6Q6ZV73 1430 aa18.69■□□□□ 0.58
SNAI1-201ENST00000244050 FAM50AQ14320 339 aaKnown RBP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms