RNA–Protein interactions for RNA: ENST00000243077.7

LRP1-201, Transcript of LDL receptor related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP1, Length 14,897 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-201ENST00000243077 GOLGA6L6A8MZA4 724 aa11.77□□□□□ -0.53
LRP1-201ENST00000243077 CFAP53Q96M91 514 aa11.77□□□□□ -0.53
LRP1-201ENST00000243077 PABPN1Q86U42 306 aaKnown RBP eCLIP11.76□□□□□ -0.532e-6■■□□□ 11.7
LRP1-201ENST00000243077 ZNF777Q9ULD5 760 aaPredicted RBP11.75□□□□□ -0.53
LRP1-201ENST00000243077 ARID4BQ4LE39 1312 aaPredicted RBP11.75□□□□□ -0.53
LRP1-201ENST00000243077 HAP1P54257 671 aaPredicted RBP11.74□□□□□ -0.53
LRP1-201ENST00000243077 PPP4R2Q9NY27 417 aa11.74□□□□□ -0.53
LRP1-201ENST00000243077 L1TD1Q5T7N2 865 aaKnown RBP11.73□□□□□ -0.53
LRP1-201ENST00000243077 CHMP4AQ9BY43 222 aa11.71□□□□□ -0.53
LRP1-201ENST00000243077 NBR1Q14596 966 aa11.71□□□□□ -0.54
LRP1-201ENST00000243077 KNSTRNQ9Y448 316 aa11.7□□□□□ -0.54
LRP1-201ENST00000243077 MTUS2Q5JR59 1369 aa11.69□□□□□ -0.54
LRP1-201ENST00000243077 NUDCQ9Y266 331 aa11.69□□□□□ -0.54
LRP1-201ENST00000243077 CHAF1AQ13111 956 aaPredicted RBP11.68□□□□□ -0.54
LRP1-201ENST00000243077 PTMAP06454 111 aaKnown RBP11.68□□□□□ -0.54
LRP1-201ENST00000243077 P3H3Q8IVL6 736 aa11.67□□□□□ -0.54
LRP1-201ENST00000243077 USP35Q9P2H5 1018 aa11.67□□□□□ -0.54
LRP1-201ENST00000243077 CCER2I3L3R5 266 aa11.66□□□□□ -0.54
LRP1-201ENST00000243077 MIER1Q8N108 512 aa11.66□□□□□ -0.54
LRP1-201ENST00000243077 BCL11AQ9H165 835 aa11.64□□□□□ -0.55
LRP1-201ENST00000243077 FTSJ3Q8IY81 847 aaKnown RBP11.64□□□□□ -0.55
LRP1-201ENST00000243077 CHGAP10645 457 aaKnown RBP11.64□□□□□ -0.55
LRP1-201ENST00000243077 CLIP1P30622 1438 aa11.62□□□□□ -0.55
LRP1-201ENST00000243077 PLEKHD1A6NEE1 506 aa11.62□□□□□ -0.55
LRP1-201ENST00000243077 NOP58Q9Y2X3 529 aaKnown RBP11.61□□□□□ -0.55
LRP1-201ENST00000243077 DNTTIP2Q5QJE6 756 aaKnown RBP11.6□□□□□ -0.55
LRP1-201ENST00000243077 ABCC9O60706 1549 aa11.6□□□□□ -0.55
LRP1-201ENST00000243077 SCAF1Q9H7N4 1312 aaKnown RBP11.59□□□□□ -0.55
LRP1-201ENST00000243077 MCCP23508 829 aa11.59□□□□□ -0.55
LRP1-201ENST00000243077 HDGFP51858 240 aaKnown RBP11.59□□□□□ -0.55
LRP1-201ENST00000243077 TNIKQ9UKE5 1360 aa11.58□□□□□ -0.56
LRP1-201ENST00000243077 GOLGA3Q08378 1498 aa11.57□□□□□ -0.56
LRP1-201ENST00000243077 CALD1Q05682 793 aaKnown RBP11.57□□□□□ -0.56
LRP1-201ENST00000243077 HDAC5Q9UQL6 1122 aa11.57□□□□□ -0.56
LRP1-201ENST00000243077 IPO8O15397 1037 aaKnown RBP11.56□□□□□ -0.56
LRP1-201ENST00000243077 CHMP7Q8WUX9 453 aaPredicted RBP11.56□□□□□ -0.56
LRP1-201ENST00000243077 ZCCHC6Q5VYS8 1495 aaKnown RBP11.55□□□□□ -0.56
LRP1-201ENST00000243077 HSCBQ8IWL3 235 aa11.54□□□□□ -0.56
LRP1-201ENST00000243077 KDM2AQ9Y2K7 1162 aa11.54□□□□□ -0.56
LRP1-201ENST00000243077 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.54□□□□□ -0.561e-7■□□□□ 9.5
LRP1-201ENST00000243077 SALL2Q9Y467 1007 aaPredicted RBP11.53□□□□□ -0.56
LRP1-201ENST00000243077 MSNP26038 577 aaKnown RBP11.53□□□□□ -0.56
LRP1-201ENST00000243077 CCDC34Q96HJ3 373 aa11.53□□□□□ -0.56
LRP1-201ENST00000243077 HTATSF1O43719 755 aaKnown RBP11.53□□□□□ -0.56
LRP1-201ENST00000243077 GBP4Q96PP9 640 aa11.53□□□□□ -0.56
LRP1-201ENST00000243077 CCDC180Q9P1Z9 1646 aa11.53□□□□□ -0.56
LRP1-201ENST00000243077 SYAP1Q96A49 352 aaPredicted RBP11.53□□□□□ -0.56
LRP1-201ENST00000243077 FHAD1B1AJZ9 1412 aa11.53□□□□□ -0.56
LRP1-201ENST00000243077 SUPT16HQ9Y5B9 1047 aaKnown RBP11.52□□□□□ -0.56
LRP1-201ENST00000243077 CHMP4CQ96CF2 233 aa11.52□□□□□ -0.57
LRP1-201ENST00000243077 HSP90AB1P08238 724 aaKnown RBP11.52□□□□□ -0.57
LRP1-201ENST00000243077 TCERG1O14776 1098 aaKnown RBP11.51□□□□□ -0.57
LRP1-201ENST00000243077 CARD11Q9BXL7 1154 aa11.51□□□□□ -0.57
LRP1-201ENST00000243077 MAPK8IP3Q9UPT6 1336 aa11.51□□□□□ -0.57
LRP1-201ENST00000243077 CSPP1Q1MSJ5 1256 aa11.51□□□□□ -0.57
LRP1-201ENST00000243077 GOLGA6L4A6NEF3 574 aa11.5□□□□□ -0.57
LRP1-201ENST00000243077 RALBP1Q15311 655 aa11.5□□□□□ -0.57
LRP1-201ENST00000243077 CHIC2Q9UKJ5 165 aa11.5□□□□□ -0.57
LRP1-201ENST00000243077 NAP1L5Q96NT1 182 aaPredicted RBP11.5□□□□□ -0.57
LRP1-201ENST00000243077 KIF27Q86VH2 1401 aa11.5□□□□□ -0.57
LRP1-201ENST00000243077 TMF1P82094 1093 aa11.49□□□□□ -0.57
LRP1-201ENST00000243077 KIAA2012Q0VF49 1180 aa11.48□□□□□ -0.57
LRP1-201ENST00000243077 CEP164Q9UPV0 1460 aa11.47□□□□□ -0.57
LRP1-201ENST00000243077 SCRIBQ14160 1630 aa11.47□□□□□ -0.57
LRP1-201ENST00000243077 PHF14O94880 888 aa11.47□□□□□ -0.57
LRP1-201ENST00000243077 CFDP1Q9UEE9 299 aaPredicted RBP11.47□□□□□ -0.57
LRP1-201ENST00000243077 PDE3BQ13370 1112 aa11.47□□□□□ -0.57
LRP1-201ENST00000243077 FGD1P98174 961 aa11.45□□□□□ -0.58
LRP1-201ENST00000243077 PPP1R15AO75807 674 aaPredicted RBP11.45□□□□□ -0.58
LRP1-201ENST00000243077 TPM4P67936 248 aa11.44□□□□□ -0.58
LRP1-201ENST00000243077 ARID3CA6NKF2 412 aa11.44□□□□□ -0.58
LRP1-201ENST00000243077 KIAA1211Q6ZU35 1233 aa11.44□□□□□ -0.58
LRP1-201ENST00000243077 CEP162Q5TB80 1403 aa11.43□□□□□ -0.58
LRP1-201ENST00000243077 RWDD1Q9H446 243 aaPredicted RBP11.43□□□□□ -0.58
LRP1-201ENST00000243077 NGEFQ8N5V2 710 aa11.43□□□□□ -0.58
LRP1-201ENST00000243077 RRP7BPQ9NSQ0 103 aa11.42□□□□□ -0.58
LRP1-201ENST00000243077 PHLDB1Q86UU1 1377 aa11.42□□□□□ -0.58
LRP1-201ENST00000243077 KCNJ4P48050 445 aa11.42□□□□□ -0.58
LRP1-201ENST00000243077 PMFBP1Q8TBY8 1022 aa11.41□□□□□ -0.58
LRP1-201ENST00000243077 RSPH4AQ5TD94 716 aa11.41□□□□□ -0.58
LRP1-201ENST00000243077 ARXQ96QS3 562 aa11.41□□□□□ -0.58
LRP1-201ENST00000243077 CCNB3Q8WWL7 1395 aa11.4□□□□□ -0.58
LRP1-201ENST00000243077 KANK1Q14678 1352 aa11.4□□□□□ -0.58
LRP1-201ENST00000243077 ROCK2O75116 1388 aaKnown RBP11.39□□□□□ -0.59
LRP1-201ENST00000243077 OS9Q13438 667 aaPredicted RBP11.38□□□□□ -0.59
LRP1-201ENST00000243077 KIF3AQ9Y496 699 aa11.38□□□□□ -0.59
LRP1-201ENST00000243077 SKOR2Q2VWA4 1001 aaPredicted RBP11.37□□□□□ -0.59
LRP1-201ENST00000243077 GPATCH3Q96I76 525 aa11.37□□□□□ -0.59
LRP1-201ENST00000243077 GOLGA2Q08379 1002 aa11.37□□□□□ -0.59
LRP1-201ENST00000243077 RSPH6AQ9H0K4 717 aa11.36□□□□□ -0.59
LRP1-201ENST00000243077 GOLGA6L1Q8N7Z2 621 aa11.36□□□□□ -0.59
LRP1-201ENST00000243077 POGKQ9P215 609 aa11.36□□□□□ -0.59
LRP1-201ENST00000243077 WRNQ14191 1432 aaPredicted RBP eCLIP11.36□□□□□ -0.59
LRP1-201ENST00000243077 DRC7Q8IY82 874 aa11.35□□□□□ -0.59
LRP1-201ENST00000243077 AAMPQ13685 434 aa11.35□□□□□ -0.59
LRP1-201ENST00000243077 DEKP35659 375 aaKnown RBP11.35□□□□□ -0.59
LRP1-201ENST00000243077 RBM19Q9Y4C8 960 aaKnown RBP11.35□□□□□ -0.59
LRP1-201ENST00000243077 NACADO15069 1562 aa11.34□□□□□ -0.59
LRP1-201ENST00000243077 RCAN3Q9UKA8 241 aa11.34□□□□□ -0.59
LRP1-201ENST00000243077 IRX6P78412 446 aaPredicted RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms