RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 EEA1Q15075 1411 aa17.96■□□□□ 0.47
PFDN5-201ENST00000243040 ERCC6L2Q5T890 1561 aa17.93■□□□□ 0.46
PFDN5-201ENST00000243040 CHIC1Q5VXU3 224 aa17.93■□□□□ 0.46
PFDN5-201ENST00000243040 PRXQ9BXM0 1461 aa17.93■□□□□ 0.46
PFDN5-201ENST00000243040 CTTNBP2Q8WZ74 1663 aa17.91■□□□□ 0.46
PFDN5-201ENST00000243040 IQGAP2Q13576 1575 aa17.9■□□□□ 0.46
PFDN5-201ENST00000243040 JPH4Q96JJ6 628 aa17.86■□□□□ 0.45
PFDN5-201ENST00000243040 PRG4Q92954 1404 aaPredicted RBP17.86■□□□□ 0.45
PFDN5-201ENST00000243040 CYB5RLQ6IPT4 315 aa17.83■□□□□ 0.44
PFDN5-201ENST00000243040 CSRNP3Q8WYN3 585 aa17.82■□□□□ 0.44
PFDN5-201ENST00000243040 KIF21BO75037 1637 aa17.81■□□□□ 0.44
PFDN5-201ENST00000243040 UGGT2Q9NYU1 1516 aa17.8■□□□□ 0.44
PFDN5-201ENST00000243040 CARMIL2Q6F5E8 1435 aa17.74■□□□□ 0.43
PFDN5-201ENST00000243040 DISP1Q96F81 1524 aa17.74■□□□□ 0.43
PFDN5-201ENST00000243040 KIAA0556O60303 1618 aa17.74■□□□□ 0.43
PFDN5-201ENST00000243040 FAM9AQ8IZU1 332 aaPredicted RBP17.68■□□□□ 0.42
PFDN5-201ENST00000243040 GOLGA3Q08378 1498 aa17.68■□□□□ 0.42
PFDN5-201ENST00000243040 TNIKQ9UKE5 1360 aa17.67■□□□□ 0.42
PFDN5-201ENST00000243040 ADCY10Q96PN6 1610 aa17.67■□□□□ 0.42
PFDN5-201ENST00000243040 SAMD9Q5K651 1589 aa17.65■□□□□ 0.42
PFDN5-201ENST00000243040 PTPRGP23470 1445 aa17.64■□□□□ 0.41
PFDN5-201ENST00000243040 UHRF1BP1LA0JNW5 1464 aa17.59■□□□□ 0.41
PFDN5-201ENST00000243040 MAPKBP1O60336 1514 aa17.57■□□□□ 0.4
PFDN5-201ENST00000243040 ABCC2Q92887 1545 aa17.57■□□□□ 0.4
PFDN5-201ENST00000243040 EFCAB5A4FU69 1503 aa17.56■□□□□ 0.4
PFDN5-201ENST00000243040 UACAQ9BZF9 1416 aa17.55■□□□□ 0.4
PFDN5-201ENST00000243040 ABCA8O94911 1581 aa17.53■□□□□ 0.4
PFDN5-201ENST00000243040 KIF13AQ9H1H9 1805 aa17.51■□□□□ 0.39
PFDN5-201ENST00000243040 KDM5BQ9UGL1 1544 aa17.5■□□□□ 0.39
PFDN5-201ENST00000243040 ZCCHC11Q5TAX3 1644 aaKnown RBP17.49■□□□□ 0.39
PFDN5-201ENST00000243040 PLB1Q6P1J6 1458 aa17.49■□□□□ 0.39
PFDN5-201ENST00000243040 TTBK1Q5TCY1 1321 aaPredicted RBP17.47■□□□□ 0.39
PFDN5-201ENST00000243040 NPM1P06748 294 aaKnown RBP eCLIP17.47■□□□□ 0.39
PFDN5-201ENST00000243040 DIP2BQ9P265 1576 aa17.46■□□□□ 0.39
PFDN5-201ENST00000243040 UBTFP17480 764 aaKnown RBP17.46■□□□□ 0.39
PFDN5-201ENST00000243040 RAPGEF6Q8TEU7 1601 aa17.46■□□□□ 0.39
PFDN5-201ENST00000243040 TRHP20396 242 aaPredicted RBP17.44■□□□□ 0.38
PFDN5-201ENST00000243040 FHOD3Q2V2M9 1422 aa17.44■□□□□ 0.38
PFDN5-201ENST00000243040 ABCC10Q5T3U5 1492 aa17.44■□□□□ 0.38
PFDN5-201ENST00000243040 ARHGAP35Q9NRY4 1499 aa17.42■□□□□ 0.38
PFDN5-201ENST00000243040 P3H3Q8IVL6 736 aa17.41■□□□□ 0.38
PFDN5-201ENST00000243040 EHMT2Q96KQ7 1210 aa17.41■□□□□ 0.38
PFDN5-201ENST00000243040 ASXL2Q76L83 1435 aa17.39■□□□□ 0.38
PFDN5-201ENST00000243040 GLI2P10070 1586 aa17.37■□□□□ 0.37
PFDN5-201ENST00000243040 RANGAP1P46060 587 aaPredicted RBP17.37■□□□□ 0.37
PFDN5-201ENST00000243040 NUP153P49790 1475 aaKnown RBP17.35■□□□□ 0.37
PFDN5-201ENST00000243040 FMN1Q68DA7 1419 aa17.34■□□□□ 0.37
PFDN5-201ENST00000243040 WDR7Q9Y4E6 1490 aa17.34■□□□□ 0.37
PFDN5-201ENST00000243040 EPRSP07814 1512 aaKnown RBP17.32■□□□□ 0.36
PFDN5-201ENST00000243040 ATP10BO94823 1461 aa17.32■□□□□ 0.36
PFDN5-201ENST00000243040 HECW1Q76N89 1606 aa17.31■□□□□ 0.36
PFDN5-201ENST00000243040 MAP3K4Q9Y6R4 1608 aa17.31■□□□□ 0.36
PFDN5-201ENST00000243040 FAM69CQ0P6D2 419 aa17.29■□□□□ 0.36
PFDN5-201ENST00000243040 PPRC1Q5VV67 1664 aaKnown RBP17.29■□□□□ 0.36
PFDN5-201ENST00000243040 TSPOAP1O95153 1857 aa17.28■□□□□ 0.36
PFDN5-201ENST00000243040 CLIP1P30622 1438 aa17.28■□□□□ 0.36
PFDN5-201ENST00000243040 CFAP43Q8NDM7 1665 aa17.27■□□□□ 0.36
PFDN5-201ENST00000243040 LRRIQ1Q96JM4 1722 aa17.26■□□□□ 0.35
PFDN5-201ENST00000243040 PCF11O94913 1555 aaKnown RBP17.25■□□□□ 0.35
PFDN5-201ENST00000243040 CEP162Q5TB80 1403 aa17.23■□□□□ 0.35
PFDN5-201ENST00000243040 CDK13Q14004 1512 aaKnown RBP17.21■□□□□ 0.35
PFDN5-201ENST00000243040 ABCA9Q8IUA7 1624 aa17.21■□□□□ 0.35
PFDN5-201ENST00000243040 CASKIN1Q8WXD9 1431 aa17.21■□□□□ 0.34
PFDN5-201ENST00000243040 FYCO1Q9BQS8 1478 aa17.2■□□□□ 0.34
PFDN5-201ENST00000243040 ARID3CA6NKF2 412 aa17.19■□□□□ 0.34
PFDN5-201ENST00000243040 CCDC18Q5T9S5 1454 aa17.17■□□□□ 0.34
PFDN5-201ENST00000243040 TEX14Q8IWB6 1497 aa17.17■□□□□ 0.34
PFDN5-201ENST00000243040 MAGI3Q5TCQ9 1506 aa17.16■□□□□ 0.34
PFDN5-201ENST00000243040 KDM6BO15054 1643 aa17.16■□□□□ 0.34
PFDN5-201ENST00000243040 LOC105371045A0A1W2PR82 267 aa17.14■□□□□ 0.33
PFDN5-201ENST00000243040 CD109Q6YHK3 1445 aa17.13■□□□□ 0.33
PFDN5-201ENST00000243040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.13■□□□□ 0.33
PFDN5-201ENST00000243040 HNRNPUL2Q1KMD3 747 aaKnown RBP17.13■□□□□ 0.33
PFDN5-201ENST00000243040 PLEKHD1A6NEE1 506 aa17.11■□□□□ 0.33
PFDN5-201ENST00000243040 KCNH8Q96L42 1107 aa17.11■□□□□ 0.33
PFDN5-201ENST00000243040 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.11■□□□□ 0.333e-9■□□□□ 10.9
PFDN5-201ENST00000243040 TTC37Q6PGP7 1564 aa17.11■□□□□ 0.33
PFDN5-201ENST00000243040 KIF14Q15058 1648 aa17.1■□□□□ 0.33
PFDN5-201ENST00000243040 TROQ12816 1431 aaPredicted RBP17.08■□□□□ 0.32
PFDN5-201ENST00000243040 ATP1B4Q9UN42 357 aaPredicted RBP17.07■□□□□ 0.32
PFDN5-201ENST00000243040 CDK11AQ9UQ88 783 aaPredicted RBP17.06■□□□□ 0.32
PFDN5-201ENST00000243040 MYO5CQ9NQX4 1742 aa17.06■□□□□ 0.32
PFDN5-201ENST00000243040 CFAP74Q9C0B2 1584 aa17.06■□□□□ 0.32
PFDN5-201ENST00000243040 VPS8Q8N3P4 1428 aa17.04■□□□□ 0.32
PFDN5-201ENST00000243040 ARAP3Q8WWN8 1544 aa17.03■□□□□ 0.32
PFDN5-201ENST00000243040 NEO1Q92859 1461 aa17.03■□□□□ 0.32
PFDN5-201ENST00000243040 COL17A1Q9UMD9 1497 aaPredicted RBP17.01■□□□□ 0.31
PFDN5-201ENST00000243040 PHLDB1Q86UU1 1377 aa17.01■□□□□ 0.31
PFDN5-201ENST00000243040 PREX2Q70Z35 1606 aa16.99■□□□□ 0.31
PFDN5-201ENST00000243040 EHBP1L1Q8N3D4 1523 aa16.98■□□□□ 0.31
PFDN5-201ENST00000243040 PLCH2O75038 1416 aa16.97■□□□□ 0.31
PFDN5-201ENST00000243040 CDC42BPAQ5VT25 1732 aa16.97■□□□□ 0.31
PFDN5-201ENST00000243040 CDC42BPBQ9Y5S2 1711 aa16.97■□□□□ 0.31
PFDN5-201ENST00000243040 FANCAO15360 1455 aa16.97■□□□□ 0.31
PFDN5-201ENST00000243040 TIAM1Q13009 1591 aa16.97■□□□□ 0.31
PFDN5-201ENST00000243040 RICTORQ6R327 1708 aa16.95■□□□□ 0.3
PFDN5-201ENST00000243040 FRMPD1Q5SYB0 1578 aa16.94■□□□□ 0.3
PFDN5-201ENST00000243040 MAP3K1Q13233 1512 aa16.94■□□□□ 0.3
PFDN5-201ENST00000243040 AKNAQ7Z591 1439 aa16.92■□□□□ 0.3
PFDN5-201ENST00000243040 MTUS2Q5JR59 1369 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms