RNA–Protein interactions for RNA: ENST00000242994.3

NEUROD4-201, Transcript of neuronal differentiation 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEUROD4, Length 3,953 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4-201ENST00000242994 CUX2O14529 1486 aa10.17□□□□□ -0.78
NEUROD4-201ENST00000242994 TOP2AP11388 1531 aaKnown RBP10.17□□□□□ -0.78
NEUROD4-201ENST00000242994 NPM2Q86SE8 214 aaKnown RBP10.16□□□□□ -0.78
NEUROD4-201ENST00000242994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.16□□□□□ -0.78
NEUROD4-201ENST00000242994 SUPT16HQ9Y5B9 1047 aaKnown RBP10.15□□□□□ -0.79
NEUROD4-201ENST00000242994 CARMIL1Q5VZK9 1371 aa10.14□□□□□ -0.79
NEUROD4-201ENST00000242994 EIF4G2P78344 907 aaKnown RBP eCLIP10.13□□□□□ -0.79
NEUROD4-201ENST00000242994 BCL11AQ9H165 835 aa10.13□□□□□ -0.79
NEUROD4-201ENST00000242994 KCNH8Q96L42 1107 aa10.12□□□□□ -0.79
NEUROD4-201ENST00000242994 TMC1Q8TDI8 760 aa10.11□□□□□ -0.79
NEUROD4-201ENST00000242994 FOXD1Q16676 465 aa10.1□□□□□ -0.79
NEUROD4-201ENST00000242994 SMARCA4P51532 1647 aa10.1□□□□□ -0.79
NEUROD4-201ENST00000242994 RAB3GAP2Q9H2M9 1393 aa10.1□□□□□ -0.79
NEUROD4-201ENST00000242994 CHMP7Q8WUX9 453 aaPredicted RBP10.1□□□□□ -0.79
NEUROD4-201ENST00000242994 RGL3Q3MIN7 710 aa10.08□□□□□ -0.8
NEUROD4-201ENST00000242994 SENP3Q9H4L4 574 aaPredicted RBP10.08□□□□□ -0.8
NEUROD4-201ENST00000242994 CCDC136Q96JN2 1154 aa10.07□□□□□ -0.8
NEUROD4-201ENST00000242994 TSPY4P0CV99 314 aa10.07□□□□□ -0.8
NEUROD4-201ENST00000242994 TSPY10P0CW01 314 aa10.07□□□□□ -0.8
NEUROD4-201ENST00000242994 CHGAP10645 457 aaKnown RBP10.07□□□□□ -0.8
NEUROD4-201ENST00000242994 NBR1Q14596 966 aa10.07□□□□□ -0.8
NEUROD4-201ENST00000242994 ATAD2BQ9ULI0 1458 aa10.06□□□□□ -0.8
NEUROD4-201ENST00000242994 ANP32AP39687 249 aaKnown RBP10.05□□□□□ -0.8
NEUROD4-201ENST00000242994 TDRD9Q8NDG6 1382 aaKnown RBP10.05□□□□□ -0.8
NEUROD4-201ENST00000242994 SMARCA2P51531 1590 aa10.05□□□□□ -0.8
NEUROD4-201ENST00000242994 CANXP27824 592 aaKnown RBP10.04□□□□□ -0.8
NEUROD4-201ENST00000242994 SETD5Q9C0A6 1442 aa10.04□□□□□ -0.8
NEUROD4-201ENST00000242994 DHX57Q6P158 1386 aaKnown RBP10.04□□□□□ -0.8
NEUROD4-201ENST00000242994 CFDP1Q9UEE9 299 aaPredicted RBP10.04□□□□□ -0.8
NEUROD4-201ENST00000242994 FHAD1B1AJZ9 1412 aa10.02□□□□□ -0.8
NEUROD4-201ENST00000242994 FHOD3Q2V2M9 1422 aa10.02□□□□□ -0.81
NEUROD4-201ENST00000242994 EIF4G1Q04637 1599 aaKnown RBP10.01□□□□□ -0.81
NEUROD4-201ENST00000242994 B4GALNT3Q6L9W6 998 aa10□□□□□ -0.81
NEUROD4-201ENST00000242994 PLEKHD1A6NEE1 506 aa9.98□□□□□ -0.81
NEUROD4-201ENST00000242994 HSPA5P11021 654 aaKnown RBP9.98□□□□□ -0.81
NEUROD4-201ENST00000242994 CARD11Q9BXL7 1154 aa9.98□□□□□ -0.81
NEUROD4-201ENST00000242994 ARHGAP35Q9NRY4 1499 aa9.97□□□□□ -0.81
NEUROD4-201ENST00000242994 PPP1R15AO75807 674 aaPredicted RBP9.97□□□□□ -0.81
NEUROD4-201ENST00000242994 ANP32EQ9BTT0 268 aa9.94□□□□□ -0.82
NEUROD4-201ENST00000242994 CADPSQ9ULU8 1353 aa9.93□□□□□ -0.82
NEUROD4-201ENST00000242994 TSHZ2Q9NRE2 1034 aa9.92□□□□□ -0.82
NEUROD4-201ENST00000242994 WDR43Q15061 677 aaKnown RBP eCLIP9.92□□□□□ -0.82
NEUROD4-201ENST00000242994 ZBTB47Q9UFB7 747 aaPredicted RBP9.92□□□□□ -0.82
NEUROD4-201ENST00000242994 DCAF11Q8TEB1 546 aa9.92□□□□□ -0.82
NEUROD4-201ENST00000242994 RBM19Q9Y4C8 960 aaKnown RBP9.91□□□□□ -0.82
NEUROD4-201ENST00000242994 SYNJ1O43426 1573 aa9.91□□□□□ -0.82
NEUROD4-201ENST00000242994 SLC24A1O60721 1099 aa9.91□□□□□ -0.82
NEUROD4-201ENST00000242994 L3MBTL2Q969R5 705 aa9.91□□□□□ -0.82
NEUROD4-201ENST00000242994 MPHOSPH9Q99550 1183 aa9.91□□□□□ -0.82
NEUROD4-201ENST00000242994 KIF21BO75037 1637 aa9.91□□□□□ -0.82
NEUROD4-201ENST00000242994 CC2D1BQ5T0F9 858 aaKnown RBP9.9□□□□□ -0.82
NEUROD4-201ENST00000242994 TIMELESSQ9UNS1 1208 aa9.9□□□□□ -0.82
NEUROD4-201ENST00000242994 PKD2Q13563 968 aa9.89□□□□□ -0.83
NEUROD4-201ENST00000242994 PLPPR3Q6T4P5 718 aa9.89□□□□□ -0.83
NEUROD4-201ENST00000242994 CCER2I3L3R5 266 aa9.89□□□□□ -0.83
NEUROD4-201ENST00000242994 IGF1RP08069 1367 aa9.88□□□□□ -0.83
NEUROD4-201ENST00000242994 ARXQ96QS3 562 aa9.88□□□□□ -0.83
NEUROD4-201ENST00000242994 ARAP1Q96P48 1450 aa9.88□□□□□ -0.83
NEUROD4-201ENST00000242994 PPP4R2Q9NY27 417 aa9.88□□□□□ -0.83
NEUROD4-201ENST00000242994 PHLDB1Q86UU1 1377 aa9.87□□□□□ -0.83
NEUROD4-201ENST00000242994 FMN1Q68DA7 1419 aa9.87□□□□□ -0.83
NEUROD4-201ENST00000242994 NEUROD2Q15784 382 aa9.86□□□□□ -0.83
NEUROD4-201ENST00000242994 TNNT2P45379 298 aaPredicted RBP9.85□□□□□ -0.83
NEUROD4-201ENST00000242994 RAD54L2Q9Y4B4 1467 aa9.85□□□□□ -0.83
NEUROD4-201ENST00000242994 STAG3Q9UJ98 1225 aa9.84□□□□□ -0.83
NEUROD4-201ENST00000242994 NEFMP07197 916 aa9.83□□□□□ -0.84
NEUROD4-201ENST00000242994 FGD5Q6ZNL6 1462 aa9.83□□□□□ -0.84
NEUROD4-201ENST00000242994 ERCC6Q03468 1493 aa9.83□□□□□ -0.84
NEUROD4-201ENST00000242994 NPM1P06748 294 aaKnown RBP eCLIP9.82□□□□□ -0.84
NEUROD4-201ENST00000242994 KNSTRNQ9Y448 316 aa9.82□□□□□ -0.84
NEUROD4-201ENST00000242994 FANCD2Q9BXW9 1451 aa9.82□□□□□ -0.84
NEUROD4-201ENST00000242994 LAS1LQ9Y4W2 734 aaKnown RBP9.82□□□□□ -0.84
NEUROD4-201ENST00000242994 RGS3P49796 1198 aa9.81□□□□□ -0.84
NEUROD4-201ENST00000242994 NUP155O75694 1391 aa9.8□□□□□ -0.84
NEUROD4-201ENST00000242994 ZNF644Q9H582 1327 aaPredicted RBP9.8□□□□□ -0.84
NEUROD4-201ENST00000242994 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.8□□□□□ -0.84
NEUROD4-201ENST00000242994 CCDC18Q5T9S5 1454 aa9.79□□□□□ -0.84
NEUROD4-201ENST00000242994 HNRNPMP52272 730 aaKnown RBP eCLIP9.79□□□□□ -0.84
NEUROD4-201ENST00000242994 PDS5BQ9NTI5 1447 aa9.78□□□□□ -0.84
NEUROD4-201ENST00000242994 EIF5BO60841 1220 aaKnown RBP9.78□□□□□ -0.84
NEUROD4-201ENST00000242994 LRRC9Q6ZRR7 1453 aa9.76□□□□□ -0.85
NEUROD4-201ENST00000242994 PPM1GO15355 546 aaPredicted RBP9.76□□□□□ -0.85
NEUROD4-201ENST00000242994 FRAT1Q92837 279 aaPredicted RBP9.76□□□□□ -0.85
NEUROD4-201ENST00000242994 PRKRIP1Q9H875 184 aaPredicted RBP9.76□□□□□ -0.85
NEUROD4-201ENST00000242994 PRXQ9BXM0 1461 aa9.75□□□□□ -0.85
NEUROD4-201ENST00000242994 UPF2Q9HAU5 1272 aaKnown RBP9.75□□□□□ -0.85
NEUROD4-201ENST00000242994 NOP58Q9Y2X3 529 aaKnown RBP9.75□□□□□ -0.85
NEUROD4-201ENST00000242994 ST20-MTHFSA0A0A6YYL1 179 aa9.75□□□□□ -0.85
NEUROD4-201ENST00000242994 PLEKHG5O94827 1062 aa9.75□□□□□ -0.85
NEUROD4-201ENST00000242994 HSP90AA1P07900 732 aaKnown RBP9.75□□□□□ -0.85
NEUROD4-201ENST00000242994 SAFB2Q14151 953 aaKnown RBP eCLIP9.74□□□□□ -0.85
NEUROD4-201ENST00000242994 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
NEUROD4-201ENST00000242994 FGD6Q6ZV73 1430 aa9.74□□□□□ -0.85
NEUROD4-201ENST00000242994 ESF1Q9H501 851 aaKnown RBP9.74□□□□□ -0.85
NEUROD4-201ENST00000242994 ROCK2O75116 1388 aaKnown RBP9.73□□□□□ -0.85
NEUROD4-201ENST00000242994 CUX1P39880 1505 aa9.73□□□□□ -0.85
NEUROD4-201ENST00000242994 NCAPD3P42695 1498 aa9.73□□□□□ -0.85
NEUROD4-201ENST00000242994 RRBP1Q9P2E9 1410 aaKnown RBP9.73□□□□□ -0.85
NEUROD4-201ENST00000242994 TMF1P82094 1093 aa9.73□□□□□ -0.85
NEUROD4-201ENST00000242994 JPH4Q96JJ6 628 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms