RNA–Protein interactions for RNA: ENST00000237353.14

PMFBP1-201, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PMFBP1, Length 3,527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-201ENST00000237353 TOPBP1Q92547 1522 aa10.34□□□□□ -0.75
PMFBP1-201ENST00000237353 ZNF316A6NFI3 1004 aaPredicted RBP10.33□□□□□ -0.76
PMFBP1-201ENST00000237353 HNRNPUL2Q1KMD3 747 aaKnown RBP10.33□□□□□ -0.76
PMFBP1-201ENST00000237353 DIEXFQ68CQ4 756 aaKnown RBP10.32□□□□□ -0.76
PMFBP1-201ENST00000237353 TIAM1Q13009 1591 aa10.32□□□□□ -0.76
PMFBP1-201ENST00000237353 AQRO60306 1485 aaKnown RBP eCLIP10.31□□□□□ -0.763e-8■■■■■ 38.2
PMFBP1-201ENST00000237353 POLA1P09884 1462 aaPredicted RBP10.31□□□□□ -0.76
PMFBP1-201ENST00000237353 PDS5BQ9NTI5 1447 aa10.3□□□□□ -0.76
PMFBP1-201ENST00000237353 CCNB3Q8WWL7 1395 aa10.3□□□□□ -0.76
PMFBP1-201ENST00000237353 CFAP43Q8NDM7 1665 aa10.29□□□□□ -0.76
PMFBP1-201ENST00000237353 CENPBP07199 599 aaPredicted RBP10.29□□□□□ -0.76
PMFBP1-201ENST00000237353 WDR97A6NE52 1622 aa10.28□□□□□ -0.76
PMFBP1-201ENST00000237353 CTTNBP2Q8WZ74 1663 aa10.28□□□□□ -0.76
PMFBP1-201ENST00000237353 FYCO1Q9BQS8 1478 aa10.27□□□□□ -0.76
PMFBP1-201ENST00000237353 AEBP2Q6ZN18 517 aaPredicted RBP10.26□□□□□ -0.77
PMFBP1-201ENST00000237353 LRRC9Q6ZRR7 1453 aa10.26□□□□□ -0.77
PMFBP1-201ENST00000237353 ANO8Q9HCE9 1232 aaPredicted RBP10.26□□□□□ -0.77
PMFBP1-201ENST00000237353 KANK4Q5T7N3 995 aaPredicted RBP10.25□□□□□ -0.77
PMFBP1-201ENST00000237353 DHX57Q6P158 1386 aaKnown RBP10.25□□□□□ -0.77
PMFBP1-201ENST00000237353 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.24□□□□□ -0.77
PMFBP1-201ENST00000237353 FMN1Q68DA7 1419 aa10.24□□□□□ -0.77
PMFBP1-201ENST00000237353 CASKIN1Q8WXD9 1431 aa10.24□□□□□ -0.77
PMFBP1-201ENST00000237353 ABCA5Q8WWZ7 1642 aa10.24□□□□□ -0.77
PMFBP1-201ENST00000237353 RAD54L2Q9Y4B4 1467 aa10.23□□□□□ -0.77
PMFBP1-201ENST00000237353 URB2Q14146 1524 aaKnown RBP10.23□□□□□ -0.77
PMFBP1-201ENST00000237353 THOC2Q8NI27 1593 aaKnown RBP10.22□□□□□ -0.77
PMFBP1-201ENST00000237353 PODXL2Q9NZ53 605 aa10.22□□□□□ -0.77
PMFBP1-201ENST00000237353 PCF11O94913 1555 aaKnown RBP10.22□□□□□ -0.77
PMFBP1-201ENST00000237353 KIF21AQ7Z4S6 1674 aa10.22□□□□□ -0.77
PMFBP1-201ENST00000237353 NESP48681 1621 aa10.21□□□□□ -0.77
PMFBP1-201ENST00000237353 ACIN1Q9UKV3 1341 aaKnown RBP10.2□□□□□ -0.78
PMFBP1-201ENST00000237353 GAPVD1Q14C86 1478 aa10.2□□□□□ -0.78
PMFBP1-201ENST00000237353 SAMD9Q5K651 1589 aa10.19□□□□□ -0.78
PMFBP1-201ENST00000237353 SETD5Q9C0A6 1442 aa10.17□□□□□ -0.78
PMFBP1-201ENST00000237353 TIMELESSQ9UNS1 1208 aa10.15□□□□□ -0.78
PMFBP1-201ENST00000237353 FHOD3Q2V2M9 1422 aa10.15□□□□□ -0.78
PMFBP1-201ENST00000237353 TARBP1Q13395 1621 aaKnown RBP10.14□□□□□ -0.79
PMFBP1-201ENST00000237353 PLPPR3Q6T4P5 718 aa10.14□□□□□ -0.79
PMFBP1-201ENST00000237353 SNAPC4Q5SXM2 1469 aa10.13□□□□□ -0.79
PMFBP1-201ENST00000237353 RAB3GAP2Q9H2M9 1393 aa10.13□□□□□ -0.79
PMFBP1-201ENST00000237353 CCDC18Q5T9S5 1454 aa10.13□□□□□ -0.79
PMFBP1-201ENST00000237353 PHLDB1Q86UU1 1377 aa10.13□□□□□ -0.79
PMFBP1-201ENST00000237353 MRC2Q9UBG0 1479 aa10.13□□□□□ -0.79
PMFBP1-201ENST00000237353 KLHL34Q8N239 644 aa10.12□□□□□ -0.79
PMFBP1-201ENST00000237353 EHBP1L1Q8N3D4 1523 aa10.12□□□□□ -0.79
PMFBP1-201ENST00000237353 PBRM1Q86U86 1689 aa10.11□□□□□ -0.79
PMFBP1-201ENST00000237353 GRIN2BQ13224 1484 aa10.11□□□□□ -0.79
PMFBP1-201ENST00000237353 TDRD9Q8NDG6 1382 aaKnown RBP10.1□□□□□ -0.79
PMFBP1-201ENST00000237353 MTUS2Q5JR59 1369 aa10.1□□□□□ -0.79
PMFBP1-201ENST00000237353 SUPT6HQ7KZ85 1726 aaKnown RBP10.09□□□□□ -0.79
PMFBP1-201ENST00000237353 FGD6Q6ZV73 1430 aa10.09□□□□□ -0.79
PMFBP1-201ENST00000237353 HECW1Q76N89 1606 aa10.09□□□□□ -0.79
PMFBP1-201ENST00000237353 ADAMTS12P58397 1594 aa10.09□□□□□ -0.79
PMFBP1-201ENST00000237353 IFT140Q96RY7 1462 aa10.09□□□□□ -0.79
PMFBP1-201ENST00000237353 GTF3C3Q9Y5Q9 886 aa10.08□□□□□ -0.8
PMFBP1-201ENST00000237353 FAM50AQ14320 339 aaKnown RBP10.08□□□□□ -0.8
PMFBP1-201ENST00000237353 ANP32EQ9BTT0 268 aa10.08□□□□□ -0.8
PMFBP1-201ENST00000237353 MAPKBP1O60336 1514 aa10.07□□□□□ -0.8
PMFBP1-201ENST00000237353 IQGAP2Q13576 1575 aa10.07□□□□□ -0.8
PMFBP1-201ENST00000237353 NEUROD1Q13562 356 aa10.07□□□□□ -0.8
PMFBP1-201ENST00000237353 P3H3Q8IVL6 736 aa10.07□□□□□ -0.8
PMFBP1-201ENST00000237353 UBE2Q2Q8WVN8 375 aa10.06□□□□□ -0.8
PMFBP1-201ENST00000237353 ATP1B4Q9UN42 357 aaPredicted RBP10.06□□□□□ -0.8
PMFBP1-201ENST00000237353 MYOM3Q5VTT5 1437 aa10.06□□□□□ -0.8
PMFBP1-201ENST00000237353 ITGAEP38570 1179 aa10.05□□□□□ -0.8
PMFBP1-201ENST00000237353 CCDC136Q96JN2 1154 aa10.05□□□□□ -0.8
PMFBP1-201ENST00000237353 WDR62O43379 1518 aa10.05□□□□□ -0.8
PMFBP1-201ENST00000237353 UGGT2Q9NYU1 1516 aa10.05□□□□□ -0.8
PMFBP1-201ENST00000237353 NCOA2Q15596 1464 aa10.04□□□□□ -0.8
PMFBP1-201ENST00000237353 HFM1A2PYH4 1435 aa10.04□□□□□ -0.8
PMFBP1-201ENST00000237353 ARHGEF11O15085 1522 aa10.04□□□□□ -0.8
PMFBP1-201ENST00000237353 MIER1Q8N108 512 aa10.03□□□□□ -0.8
PMFBP1-201ENST00000237353 AKNAQ7Z591 1439 aa10.03□□□□□ -0.8
PMFBP1-201ENST00000237353 TCOF1Q13428 1488 aaKnown RBP10.03□□□□□ -0.8
PMFBP1-201ENST00000237353 OSCARQ8IYS5 282 aa10.03□□□□□ -0.8
PMFBP1-201ENST00000237353 MIA2Q96PC5 1412 aa10.02□□□□□ -0.81
PMFBP1-201ENST00000237353 UACAQ9BZF9 1416 aa10.01□□□□□ -0.81
PMFBP1-201ENST00000237353 PTPN23Q9H3S7 1636 aa10□□□□□ -0.81
PMFBP1-201ENST00000237353 LRRIQ1Q96JM4 1722 aa10□□□□□ -0.81
PMFBP1-201ENST00000237353 KIAA0586Q9BVV6 1533 aa10□□□□□ -0.81
PMFBP1-201ENST00000237353 PKNOX2Q96KN3 472 aa10□□□□□ -0.81
PMFBP1-201ENST00000237353 EPRSP07814 1512 aaKnown RBP9.98□□□□□ -0.81
PMFBP1-201ENST00000237353 GCC2Q8IWJ2 1684 aa9.97□□□□□ -0.81
PMFBP1-201ENST00000237353 NCBP3Q53F19 620 aaKnown RBP9.97□□□□□ -0.81
PMFBP1-201ENST00000237353 MAGI1Q96QZ7 1491 aaPredicted RBP9.97□□□□□ -0.81
PMFBP1-201ENST00000237353 NAIPQ13075 1403 aa9.95□□□□□ -0.82
PMFBP1-201ENST00000237353 KIAA0556O60303 1618 aa9.95□□□□□ -0.82
PMFBP1-201ENST00000237353 RTN4Q9NQC3 1192 aaKnown RBP9.95□□□□□ -0.82
PMFBP1-201ENST00000237353 CDK11AQ9UQ88 783 aaPredicted RBP9.94□□□□□ -0.82
PMFBP1-201ENST00000237353 TONSLQ96HA7 1378 aa9.94□□□□□ -0.82
PMFBP1-201ENST00000237353 GRIN2AQ12879 1464 aa9.94□□□□□ -0.82
PMFBP1-201ENST00000237353 PPP1R15AO75807 674 aaPredicted RBP9.93□□□□□ -0.82
PMFBP1-201ENST00000237353 SALL2Q9Y467 1007 aaPredicted RBP9.93□□□□□ -0.82
PMFBP1-201ENST00000237353 EIF4G3O43432 1585 aaKnown RBP9.93□□□□□ -0.82
PMFBP1-201ENST00000237353 ROCK1Q13464 1354 aa9.92□□□□□ -0.82
PMFBP1-201ENST00000237353 MAGI3Q5TCQ9 1506 aa9.92□□□□□ -0.82
PMFBP1-201ENST00000237353 RAPGEF6Q8TEU7 1601 aa9.92□□□□□ -0.82
PMFBP1-201ENST00000237353 YTHDC1Q96MU7 727 aaKnown RBP9.91□□□□□ -0.82
PMFBP1-201ENST00000237353 PTPRKQ15262 1439 aa9.91□□□□□ -0.82
PMFBP1-201ENST00000237353 SYNJ2O15056 1496 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms