RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 IGF1RP08069 1367 aa9.56□□□□□ -0.88
SGIP1-201ENST00000237247 SNAPC4Q5SXM2 1469 aa9.56□□□□□ -0.88
SGIP1-201ENST00000237247 CEP170Q5SW79 1584 aa9.55□□□□□ -0.88
SGIP1-201ENST00000237247 ADCY10Q96PN6 1610 aa9.54□□□□□ -0.88
SGIP1-201ENST00000237247 UGGT2Q9NYU1 1516 aa9.54□□□□□ -0.88
SGIP1-201ENST00000237247 EFCAB5A4FU69 1503 aa9.54□□□□□ -0.88
SGIP1-201ENST00000237247 NEUROD1Q13562 356 aa9.54□□□□□ -0.88
SGIP1-201ENST00000237247 CEP162Q5TB80 1403 aa9.53□□□□□ -0.88
SGIP1-201ENST00000237247 AQRO60306 1485 aaKnown RBP eCLIP9.53□□□□□ -0.88
SGIP1-201ENST00000237247 RAD54L2Q9Y4B4 1467 aa9.53□□□□□ -0.88
SGIP1-201ENST00000237247 CLASP1Q7Z460 1538 aa9.53□□□□□ -0.88
SGIP1-201ENST00000237247 CHD1O14646 1710 aa9.52□□□□□ -0.88
SGIP1-201ENST00000237247 GTF3C3Q9Y5Q9 886 aa9.52□□□□□ -0.89
SGIP1-201ENST00000237247 PDS5BQ9NTI5 1447 aa9.52□□□□□ -0.89
SGIP1-201ENST00000237247 IFT140Q96RY7 1462 aa9.52□□□□□ -0.89
SGIP1-201ENST00000237247 ARHGAP35Q9NRY4 1499 aa9.52□□□□□ -0.89
SGIP1-201ENST00000237247 ANP32EQ9BTT0 268 aa9.5□□□□□ -0.89
SGIP1-201ENST00000237247 PCF11O94913 1555 aaKnown RBP9.47□□□□□ -0.89
SGIP1-201ENST00000237247 KIAA0556O60303 1618 aa9.46□□□□□ -0.9
SGIP1-201ENST00000237247 NUP160Q12769 1436 aa9.46□□□□□ -0.9
SGIP1-201ENST00000237247 ZNF608Q9ULD9 1512 aaPredicted RBP9.46□□□□□ -0.9
SGIP1-201ENST00000237247 KIF27Q86VH2 1401 aa9.45□□□□□ -0.9
SGIP1-201ENST00000237247 DISP1Q96F81 1524 aa9.45□□□□□ -0.9
SGIP1-201ENST00000237247 GRIN2BQ13224 1484 aa9.45□□□□□ -0.9
SGIP1-201ENST00000237247 MAGI1Q96QZ7 1491 aaPredicted RBP9.44□□□□□ -0.9
SGIP1-201ENST00000237247 TIAM1Q13009 1591 aa9.44□□□□□ -0.9
SGIP1-201ENST00000237247 MAGI3Q5TCQ9 1506 aa9.42□□□□□ -0.9
SGIP1-201ENST00000237247 CROCC2H7BZ55 1655 aa9.42□□□□□ -0.9
SGIP1-201ENST00000237247 GAPVD1Q14C86 1478 aa9.42□□□□□ -0.9
SGIP1-201ENST00000237247 CCER1Q8TC90 406 aaPredicted RBP9.41□□□□□ -0.9
SGIP1-201ENST00000237247 IQGAP2Q13576 1575 aa9.41□□□□□ -0.9
SGIP1-201ENST00000237247 ABCA8O94911 1581 aa9.4□□□□□ -0.9
SGIP1-201ENST00000237247 DIEXFQ68CQ4 756 aaKnown RBP9.38□□□□□ -0.91
SGIP1-201ENST00000237247 CSRNP3Q8WYN3 585 aa9.38□□□□□ -0.91
SGIP1-201ENST00000237247 CLIP1P30622 1438 aa9.38□□□□□ -0.91
SGIP1-201ENST00000237247 VPS8Q8N3P4 1428 aa9.38□□□□□ -0.91
SGIP1-201ENST00000237247 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.37□□□□□ -0.91
SGIP1-201ENST00000237247 DAXXQ9UER7 740 aaPredicted RBP9.37□□□□□ -0.91
SGIP1-201ENST00000237247 GRIN2AQ12879 1464 aa9.37□□□□□ -0.91
SGIP1-201ENST00000237247 FHAD1B1AJZ9 1412 aa9.36□□□□□ -0.91
SGIP1-201ENST00000237247 FYCO1Q9BQS8 1478 aa9.36□□□□□ -0.91
SGIP1-201ENST00000237247 SYNJ2O15056 1496 aa9.34□□□□□ -0.91
SGIP1-201ENST00000237247 KDM5BQ9UGL1 1544 aa9.34□□□□□ -0.91
SGIP1-201ENST00000237247 ZNF316A6NFI3 1004 aaPredicted RBP9.33□□□□□ -0.92
SGIP1-201ENST00000237247 CLSPNQ9HAW4 1339 aa9.33□□□□□ -0.92
SGIP1-201ENST00000237247 GCC2Q8IWJ2 1684 aa9.32□□□□□ -0.92
SGIP1-201ENST00000237247 RRBP1Q9P2E9 1410 aaKnown RBP9.31□□□□□ -0.92
SGIP1-201ENST00000237247 RAPGEF6Q8TEU7 1601 aa9.31□□□□□ -0.92
SGIP1-201ENST00000237247 CDC42BPAQ5VT25 1732 aa9.31□□□□□ -0.92
SGIP1-201ENST00000237247 KIAA0586Q9BVV6 1533 aa9.29□□□□□ -0.92
SGIP1-201ENST00000237247 CASKIN1Q8WXD9 1431 aa9.29□□□□□ -0.92
SGIP1-201ENST00000237247 TCOF1Q13428 1488 aaKnown RBP9.28□□□□□ -0.92
SGIP1-201ENST00000237247 HECW1Q76N89 1606 aa9.27□□□□□ -0.93
SGIP1-201ENST00000237247 CARMIL1Q5VZK9 1371 aa9.27□□□□□ -0.93
SGIP1-201ENST00000237247 CDC42BPBQ9Y5S2 1711 aa9.26□□□□□ -0.93
SGIP1-201ENST00000237247 BCORL1Q5H9F3 1711 aa9.26□□□□□ -0.93
SGIP1-201ENST00000237247 UBE2Q2Q8WVN8 375 aa9.24□□□□□ -0.93
SGIP1-201ENST00000237247 ERCC6L2Q5T890 1561 aa9.24□□□□□ -0.93
SGIP1-201ENST00000237247 LRRC9Q6ZRR7 1453 aa9.23□□□□□ -0.93
SGIP1-201ENST00000237247 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.23□□□□□ -0.93
SGIP1-201ENST00000237247 ADGBQ8N7X0 1667 aa9.22□□□□□ -0.93
SGIP1-201ENST00000237247 NUP153P49790 1475 aaKnown RBP9.22□□□□□ -0.93
SGIP1-201ENST00000237247 EHMT2Q96KQ7 1210 aa9.22□□□□□ -0.93
SGIP1-201ENST00000237247 SUPT6HQ7KZ85 1726 aaKnown RBP9.22□□□□□ -0.93
SGIP1-201ENST00000237247 PREX2Q70Z35 1606 aa9.21□□□□□ -0.93
SGIP1-201ENST00000237247 UHRF1BP1LA0JNW5 1464 aa9.21□□□□□ -0.94
SGIP1-201ENST00000237247 UBTFP17480 764 aaKnown RBP9.21□□□□□ -0.94
SGIP1-201ENST00000237247 EHBP1L1Q8N3D4 1523 aa9.2□□□□□ -0.94
SGIP1-201ENST00000237247 DENND4BO75064 1496 aaPredicted RBP9.2□□□□□ -0.94
SGIP1-201ENST00000237247 ABCC10Q5T3U5 1492 aa9.19□□□□□ -0.94
SGIP1-201ENST00000237247 MAST1Q9Y2H9 1570 aa9.19□□□□□ -0.94
SGIP1-201ENST00000237247 EIF5BO60841 1220 aaKnown RBP9.19□□□□□ -0.94
SGIP1-201ENST00000237247 KIF14Q15058 1648 aa9.18□□□□□ -0.94
SGIP1-201ENST00000237247 DNMT1P26358 1616 aaKnown RBP9.18□□□□□ -0.94
SGIP1-201ENST00000237247 ZCCHC11Q5TAX3 1644 aaKnown RBP9.18□□□□□ -0.94
SGIP1-201ENST00000237247 ITSN2Q9NZM3 1697 aa9.18□□□□□ -0.94
SGIP1-201ENST00000237247 ABCA9Q8IUA7 1624 aa9.17□□□□□ -0.94
SGIP1-201ENST00000237247 PPRC1Q5VV67 1664 aaKnown RBP9.17□□□□□ -0.94
SGIP1-201ENST00000237247 DHX57Q6P158 1386 aaKnown RBP9.17□□□□□ -0.94
SGIP1-201ENST00000237247 CCDC18Q5T9S5 1454 aa9.16□□□□□ -0.94
SGIP1-201ENST00000237247 EPRSP07814 1512 aaKnown RBP9.15□□□□□ -0.95
SGIP1-201ENST00000237247 ARAP3Q8WWN8 1544 aa9.15□□□□□ -0.95
SGIP1-201ENST00000237247 TDRD9Q8NDG6 1382 aaKnown RBP9.15□□□□□ -0.95
SGIP1-201ENST00000237247 DEPDC5O75140 1603 aa9.15□□□□□ -0.95
SGIP1-201ENST00000237247 TSHZ2Q9NRE2 1034 aa9.14□□□□□ -0.95
SGIP1-201ENST00000237247 KDM6BO15054 1643 aa9.13□□□□□ -0.95
SGIP1-201ENST00000237247 PTPN23Q9H3S7 1636 aa9.13□□□□□ -0.95
SGIP1-201ENST00000237247 ARHGEF5Q12774 1597 aa9.13□□□□□ -0.95
SGIP1-201ENST00000237247 ABCC2Q92887 1545 aa9.13□□□□□ -0.95
SGIP1-201ENST00000237247 MAPKBP1O60336 1514 aa9.12□□□□□ -0.95
SGIP1-201ENST00000237247 MIER1Q8N108 512 aa9.12□□□□□ -0.95
SGIP1-201ENST00000237247 KDM5DQ9BY66 1539 aa9.11□□□□□ -0.95
SGIP1-201ENST00000237247 AKNAQ7Z591 1439 aa9.1□□□□□ -0.95
SGIP1-201ENST00000237247 TTC37Q6PGP7 1564 aa9.1□□□□□ -0.95
SGIP1-201ENST00000237247 MAP3K4Q9Y6R4 1608 aa9.1□□□□□ -0.95
SGIP1-201ENST00000237247 PLXNC1O60486 1568 aa9.1□□□□□ -0.95
SGIP1-201ENST00000237247 MYT1LQ9UL68 1186 aa9.1□□□□□ -0.95
SGIP1-201ENST00000237247 ERICH6BQ5W0A0 696 aa9.09□□□□□ -0.95
SGIP1-201ENST00000237247 MYO5CQ9NQX4 1742 aa9.08□□□□□ -0.96
SGIP1-201ENST00000237247 MAGI2Q86UL8 1455 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms