RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 ARHGAP35Q9NRY4 1499 aa29.44■■■□□ 2.3
SNX17-201ENST00000233575 CHMP7Q8WUX9 453 aaPredicted RBP29.44■■■□□ 2.3
SNX17-201ENST00000233575 FBLN2P98095 1184 aa29.42■■■□□ 2.3
SNX17-201ENST00000233575 ARAP1Q96P48 1450 aa29.42■■■□□ 2.3
SNX17-201ENST00000233575 VPS8Q8N3P4 1428 aa29.33■■■□□ 2.29
SNX17-201ENST00000233575 CEP170Q5SW79 1584 aa29.33■■■□□ 2.29
SNX17-201ENST00000233575 IQGAP2Q13576 1575 aa29.32■■■□□ 2.28
SNX17-201ENST00000233575 P3H3Q8IVL6 736 aa29.3■■■□□ 2.28
SNX17-201ENST00000233575 CHD1O14646 1710 aa29.29■■■□□ 2.28
SNX17-201ENST00000233575 KIAA0586Q9BVV6 1533 aa29.27■■■□□ 2.28
SNX17-201ENST00000233575 NUP160Q12769 1436 aa29.26■■■□□ 2.27
SNX17-201ENST00000233575 EFCAB5A4FU69 1503 aa29.26■■■□□ 2.27
SNX17-201ENST00000233575 SAMD9Q5K651 1589 aa29.24■■■□□ 2.27
SNX17-201ENST00000233575 FHOD3Q2V2M9 1422 aa29.23■■■□□ 2.27
SNX17-201ENST00000233575 PPARGC1BQ86YN6 1023 aaKnown RBP29.23■■■□□ 2.27
SNX17-201ENST00000233575 UGGT2Q9NYU1 1516 aa29.16■■■□□ 2.26
SNX17-201ENST00000233575 DISP1Q96F81 1524 aa29.07■■■□□ 2.24
SNX17-201ENST00000233575 KIAA0556O60303 1618 aa29.04■■■□□ 2.24
SNX17-201ENST00000233575 TTBK1Q5TCY1 1321 aaPredicted RBP29.04■■■□□ 2.24
SNX17-201ENST00000233575 JPH4Q96JJ6 628 aa29.04■■■□□ 2.24
SNX17-201ENST00000233575 PCF11O94913 1555 aaKnown RBP29.04■■■□□ 2.24
SNX17-201ENST00000233575 FMN1Q68DA7 1419 aa29■■■□□ 2.23
SNX17-201ENST00000233575 APLP2Q06481 763 aa28.98■■■□□ 2.23
SNX17-201ENST00000233575 CASKIN1Q8WXD9 1431 aa28.93■■■□□ 2.22
SNX17-201ENST00000233575 FYCO1Q9BQS8 1478 aa28.92■■■□□ 2.22
SNX17-201ENST00000233575 CLASP1Q7Z460 1538 aa28.92■■■□□ 2.22
SNX17-201ENST00000233575 ATP1B4Q9UN42 357 aaPredicted RBP28.92■■■□□ 2.22
SNX17-201ENST00000233575 SHROOM2Q13796 1616 aa28.9■■■□□ 2.22
SNX17-201ENST00000233575 PCGF6Q9BYE7 350 aa28.89■■■□□ 2.22
SNX17-201ENST00000233575 CARMIL2Q6F5E8 1435 aa28.88■■■□□ 2.21
SNX17-201ENST00000233575 PRG4Q92954 1404 aaPredicted RBP28.88■■■□□ 2.21
SNX17-201ENST00000233575 TRIM26Q12899 539 aaPredicted RBP28.88■■■□□ 2.21
SNX17-201ENST00000233575 KANK4Q5T7N3 995 aaPredicted RBP28.88■■■□□ 2.21
SNX17-201ENST00000233575 TIAM1Q13009 1591 aa28.85■■■□□ 2.21
SNX17-201ENST00000233575 LRRIQ1Q96JM4 1722 aa28.83■■■□□ 2.21
SNX17-201ENST00000233575 CFAP43Q8NDM7 1665 aa28.8■■■□□ 2.2
SNX17-201ENST00000233575 ERCC6L2Q5T890 1561 aa28.8■■■□□ 2.2
SNX17-201ENST00000233575 MAP3K1Q13233 1512 aa28.8■■■□□ 2.2
SNX17-201ENST00000233575 HECW1Q76N89 1606 aa28.75■■■□□ 2.19
SNX17-201ENST00000233575 PLB1Q6P1J6 1458 aa28.73■■■□□ 2.19
SNX17-201ENST00000233575 LRRC9Q6ZRR7 1453 aa28.72■■■□□ 2.19
SNX17-201ENST00000233575 OSCARQ8IYS5 282 aa28.72■■■□□ 2.19
SNX17-201ENST00000233575 RAPGEF6Q8TEU7 1601 aa28.72■■■□□ 2.19
SNX17-201ENST00000233575 ARID3CA6NKF2 412 aa28.69■■■□□ 2.18
SNX17-201ENST00000233575 EPRSP07814 1512 aaKnown RBP28.67■■■□□ 2.18
SNX17-201ENST00000233575 NUP153P49790 1475 aaKnown RBP28.67■■■□□ 2.18
SNX17-201ENST00000233575 CDK13Q14004 1512 aaKnown RBP28.66■■■□□ 2.18
SNX17-201ENST00000233575 PTPRGP23470 1445 aa28.66■■■□□ 2.18
SNX17-201ENST00000233575 CCDC18Q5T9S5 1454 aa28.63■■■□□ 2.17
SNX17-201ENST00000233575 ABCA8O94911 1581 aa28.62■■■□□ 2.17
SNX17-201ENST00000233575 MAGI3Q5TCQ9 1506 aa28.59■■■□□ 2.17
SNX17-201ENST00000233575 MTUS2Q5JR59 1369 aa28.56■■■□□ 2.16
SNX17-201ENST00000233575 EHBP1L1Q8N3D4 1523 aa28.5■■■□□ 2.15
SNX17-201ENST00000233575 UACAQ9BZF9 1416 aa28.49■■■□□ 2.15
SNX17-201ENST00000233575 PHLDB1Q86UU1 1377 aa28.49■■■□□ 2.15
SNX17-201ENST00000233575 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.48■■■□□ 2.15
SNX17-201ENST00000233575 HNRNPUL2Q1KMD3 747 aaKnown RBP28.48■■■□□ 2.15
SNX17-201ENST00000233575 ATP10BO94823 1461 aa28.45■■■□□ 2.14
SNX17-201ENST00000233575 SUPT6HQ7KZ85 1726 aaKnown RBP28.42■■■□□ 2.14
SNX17-201ENST00000233575 ABCC2Q92887 1545 aa28.42■■■□□ 2.14
SNX17-201ENST00000233575 NCOA2Q15596 1464 aa28.42■■■□□ 2.14
SNX17-201ENST00000233575 RRBP1Q9P2E9 1410 aaKnown RBP28.41■■■□□ 2.14
SNX17-201ENST00000233575 ARHGEF11O15085 1522 aa28.36■■■□□ 2.13
SNX17-201ENST00000233575 CDK11AQ9UQ88 783 aaPredicted RBP28.35■■■□□ 2.13
SNX17-201ENST00000233575 CCNB3Q8WWL7 1395 aa28.35■■■□□ 2.13
SNX17-201ENST00000233575 TROQ12816 1431 aaPredicted RBP28.33■■■□□ 2.12
SNX17-201ENST00000233575 UHRF1BP1LA0JNW5 1464 aa28.32■■■□□ 2.12
SNX17-201ENST00000233575 ADCY10Q96PN6 1610 aa28.3■■■□□ 2.12
SNX17-201ENST00000233575 KIF14Q15058 1648 aa28.28■■■□□ 2.12
SNX17-201ENST00000233575 PLEKHD1A6NEE1 506 aa28.26■■■□□ 2.12
SNX17-201ENST00000233575 MYOM3Q5VTT5 1437 aa28.26■■■□□ 2.12
SNX17-201ENST00000233575 ZCCHC11Q5TAX3 1644 aaKnown RBP28.26■■■□□ 2.11
SNX17-201ENST00000233575 FGD6Q6ZV73 1430 aa28.25■■■□□ 2.11
SNX17-201ENST00000233575 KDM5BQ9UGL1 1544 aa28.24■■■□□ 2.11
SNX17-201ENST00000233575 FAM50AQ14320 339 aaKnown RBP28.21■■■□□ 2.11
SNX17-201ENST00000233575 RIMBP3CA6NJZ7 1639 aa28.17■■■□□ 2.1
SNX17-201ENST00000233575 RIMBP3BA6NNM3 1639 aa28.17■■■□□ 2.1
SNX17-201ENST00000233575 RIMBP3Q9UFD9 1639 aa28.17■■■□□ 2.1
SNX17-201ENST00000233575 ITGAEP38570 1179 aa28.16■■■□□ 2.1
SNX17-201ENST00000233575 PTPN23Q9H3S7 1636 aa28.14■■■□□ 2.1
SNX17-201ENST00000233575 ABCC10Q5T3U5 1492 aa28.12■■■□□ 2.09
SNX17-201ENST00000233575 GPATCH8Q9UKJ3 1502 aaKnown RBP28.09■■■□□ 2.09
SNX17-201ENST00000233575 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.09■■■□□ 2.09
SNX17-201ENST00000233575 MIA2Q96PC5 1412 aa28.08■■■□□ 2.09
SNX17-201ENST00000233575 CDC42BPAQ5VT25 1732 aa28.06■■■□□ 2.08
SNX17-201ENST00000233575 TCOF1Q13428 1488 aaKnown RBP28.06■■■□□ 2.08
SNX17-201ENST00000233575 ITSN2Q9NZM3 1697 aa28.06■■■□□ 2.08
SNX17-201ENST00000233575 KCNH8Q96L42 1107 aa28.05■■■□□ 2.08
SNX17-201ENST00000233575 CYB5RLQ6IPT4 315 aa28.04■■■□□ 2.08
SNX17-201ENST00000233575 TTC37Q6PGP7 1564 aa28.03■■■□□ 2.08
SNX17-201ENST00000233575 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.03■■■□□ 2.08
SNX17-201ENST00000233575 ZNF644Q9H582 1327 aaPredicted RBP28.02■■■□□ 2.08
SNX17-201ENST00000233575 CFDP1Q9UEE9 299 aaPredicted RBP28■■■□□ 2.07
SNX17-201ENST00000233575 WDR7Q9Y4E6 1490 aa27.99■■■□□ 2.07
SNX17-201ENST00000233575 PTPRKQ15262 1439 aa27.99■■■□□ 2.07
SNX17-201ENST00000233575 ASXL2Q76L83 1435 aa27.97■■■□□ 2.07
SNX17-201ENST00000233575 NPM1P06748 294 aaKnown RBP eCLIP27.96■■■□□ 2.07
SNX17-201ENST00000233575 ZNF777Q9ULD5 760 aaPredicted RBP27.94■■■□□ 2.06
SNX17-201ENST00000233575 CAMSAP2Q08AD1 1489 aa27.94■■■□□ 2.06
SNX17-201ENST00000233575 CDC42BPBQ9Y5S2 1711 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms