RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 CYB5RLQ6IPT4 315 aa23.36■■□□□ 1.33
VEGFA-201ENST00000230480 JPH4Q96JJ6 628 aa23.32■■□□□ 1.32
VEGFA-201ENST00000230480 KIAA0586Q9BVV6 1533 aa23.32■■□□□ 1.32
VEGFA-201ENST00000230480 PRXQ9BXM0 1461 aa23.3■■□□□ 1.32
VEGFA-201ENST00000230480 RAPGEF2Q9Y4G8 1499 aa23.29■■□□□ 1.32
VEGFA-201ENST00000230480 PRG4Q92954 1404 aaPredicted RBP23.25■■□□□ 1.31
VEGFA-201ENST00000230480 CSRNP3Q8WYN3 585 aa23.21■■□□□ 1.31
VEGFA-201ENST00000230480 IQGAP2Q13576 1575 aa23.14■■□□□ 1.3
VEGFA-201ENST00000230480 EEA1Q15075 1411 aa23.13■■□□□ 1.29
VEGFA-201ENST00000230480 FAM9AQ8IZU1 332 aaPredicted RBP23.11■■□□□ 1.29
VEGFA-201ENST00000230480 DISP1Q96F81 1524 aa23.11■■□□□ 1.29
VEGFA-201ENST00000230480 UGGT2Q9NYU1 1516 aa23.08■■□□□ 1.29
VEGFA-201ENST00000230480 CTTNBP2Q8WZ74 1663 aa23.07■■□□□ 1.28
VEGFA-201ENST00000230480 KIF21BO75037 1637 aa22.99■■□□□ 1.27
VEGFA-201ENST00000230480 KIAA0556O60303 1618 aa22.97■■□□□ 1.27
VEGFA-201ENST00000230480 ADCY10Q96PN6 1610 aa22.97■■□□□ 1.27
VEGFA-201ENST00000230480 TNIKQ9UKE5 1360 aa22.96■■□□□ 1.27
VEGFA-201ENST00000230480 PTPRGP23470 1445 aa22.95■■□□□ 1.26
VEGFA-201ENST00000230480 CARMIL2Q6F5E8 1435 aa22.93■■□□□ 1.26
VEGFA-201ENST00000230480 SAMD9Q5K651 1589 aa22.84■■□□□ 1.25
VEGFA-201ENST00000230480 TTBK1Q5TCY1 1321 aaPredicted RBP22.84■■□□□ 1.25
VEGFA-201ENST00000230480 UHRF1BP1LA0JNW5 1464 aa22.82■■□□□ 1.24
VEGFA-201ENST00000230480 UACAQ9BZF9 1416 aa22.81■■□□□ 1.24
VEGFA-201ENST00000230480 GOLGA3Q08378 1498 aa22.8■■□□□ 1.24
VEGFA-201ENST00000230480 EHMT2Q96KQ7 1210 aa22.8■■□□□ 1.24
VEGFA-201ENST00000230480 TRHP20396 242 aaPredicted RBP22.78■■□□□ 1.24
VEGFA-201ENST00000230480 P3H3Q8IVL6 736 aa22.78■■□□□ 1.24
VEGFA-201ENST00000230480 PLB1Q6P1J6 1458 aa22.78■■□□□ 1.24
VEGFA-201ENST00000230480 ABCA8O94911 1581 aa22.77■■□□□ 1.24
VEGFA-201ENST00000230480 KIF13AQ9H1H9 1805 aa22.77■■□□□ 1.24
VEGFA-201ENST00000230480 MAPKBP1O60336 1514 aa22.77■■□□□ 1.24
VEGFA-201ENST00000230480 ABCC2Q92887 1545 aa22.77■■□□□ 1.24
VEGFA-201ENST00000230480 KDM5BQ9UGL1 1544 aa22.73■■□□□ 1.23
VEGFA-201ENST00000230480 UBTFP17480 764 aaKnown RBP22.69■■□□□ 1.22
VEGFA-201ENST00000230480 RANGAP1P46060 587 aaPredicted RBP22.69■■□□□ 1.22
VEGFA-201ENST00000230480 ABCC10Q5T3U5 1492 aa22.68■■□□□ 1.22
VEGFA-201ENST00000230480 FHOD3Q2V2M9 1422 aa22.68■■□□□ 1.22
VEGFA-201ENST00000230480 ZCCHC11Q5TAX3 1644 aaKnown RBP22.67■■□□□ 1.22
VEGFA-201ENST00000230480 DIP2BQ9P265 1576 aa22.65■■□□□ 1.22
VEGFA-201ENST00000230480 NPM1P06748 294 aaKnown RBP eCLIP22.65■■□□□ 1.22
VEGFA-201ENST00000230480 ARHGAP35Q9NRY4 1499 aa22.65■■□□□ 1.22
VEGFA-201ENST00000230480 ASXL2Q76L83 1435 aa22.64■■□□□ 1.21
VEGFA-201ENST00000230480 EFCAB5A4FU69 1503 aa22.62■■□□□ 1.21
VEGFA-201ENST00000230480 ATP10BO94823 1461 aa22.59■■□□□ 1.21
VEGFA-201ENST00000230480 FAM69CQ0P6D2 419 aa22.58■■□□□ 1.21
VEGFA-201ENST00000230480 RAPGEF6Q8TEU7 1601 aa22.57■■□□□ 1.2
VEGFA-201ENST00000230480 NUP153P49790 1475 aaKnown RBP22.56■■□□□ 1.2
VEGFA-201ENST00000230480 EPRSP07814 1512 aaKnown RBP22.52■■□□□ 1.2
VEGFA-201ENST00000230480 GLI2P10070 1586 aa22.52■■□□□ 1.2
VEGFA-201ENST00000230480 ARID3CA6NKF2 412 aa22.51■■□□□ 1.19
VEGFA-201ENST00000230480 PPRC1Q5VV67 1664 aaKnown RBP22.5■■□□□ 1.19
VEGFA-201ENST00000230480 LOC105371045A0A1W2PR82 267 aa22.49■■□□□ 1.19
VEGFA-201ENST00000230480 WDR7Q9Y4E6 1490 aa22.47■■□□□ 1.19
VEGFA-201ENST00000230480 TSPOAP1O95153 1857 aa22.46■■□□□ 1.19
VEGFA-201ENST00000230480 MAP3K4Q9Y6R4 1608 aa22.43■■□□□ 1.18
VEGFA-201ENST00000230480 LRRIQ1Q96JM4 1722 aa22.43■■□□□ 1.18
VEGFA-201ENST00000230480 CLIP1P30622 1438 aa22.4■■□□□ 1.18
VEGFA-201ENST00000230480 FMN1Q68DA7 1419 aa22.39■■□□□ 1.17
VEGFA-201ENST00000230480 CDK13Q14004 1512 aaKnown RBP22.38■■□□□ 1.17
VEGFA-201ENST00000230480 KCNH8Q96L42 1107 aa22.37■■□□□ 1.17
VEGFA-201ENST00000230480 COL17A1Q9UMD9 1497 aaPredicted RBP22.34■■□□□ 1.17
VEGFA-201ENST00000230480 CEP162Q5TB80 1403 aa22.31■■□□□ 1.16
VEGFA-201ENST00000230480 PCF11O94913 1555 aaKnown RBP22.31■■□□□ 1.16
VEGFA-201ENST00000230480 CASKIN1Q8WXD9 1431 aa22.31■■□□□ 1.16
VEGFA-201ENST00000230480 CFAP43Q8NDM7 1665 aa22.3■■□□□ 1.16
VEGFA-201ENST00000230480 HECW1Q76N89 1606 aa22.3■■□□□ 1.16
VEGFA-201ENST00000230480 ABCA9Q8IUA7 1624 aa22.3■■□□□ 1.16
VEGFA-201ENST00000230480 MAGI3Q5TCQ9 1506 aa22.28■■□□□ 1.16
VEGFA-201ENST00000230480 CD109Q6YHK3 1445 aa22.27■■□□□ 1.16
VEGFA-201ENST00000230480 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.26■■□□□ 1.15
VEGFA-201ENST00000230480 HNRNPUL2Q1KMD3 747 aaKnown RBP22.26■■□□□ 1.15
VEGFA-201ENST00000230480 PLEKHD1A6NEE1 506 aa22.24■■□□□ 1.15
VEGFA-201ENST00000230480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.22■■□□□ 1.155e-6■□□□□ 9.5
VEGFA-201ENST00000230480 ATP1B4Q9UN42 357 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-201ENST00000230480 KDM6BO15054 1643 aa22.2■■□□□ 1.15
VEGFA-201ENST00000230480 FYCO1Q9BQS8 1478 aa22.2■■□□□ 1.14
VEGFA-201ENST00000230480 TTC37Q6PGP7 1564 aa22.19■■□□□ 1.14
VEGFA-201ENST00000230480 KIF14Q15058 1648 aa22.17■■□□□ 1.14
VEGFA-201ENST00000230480 TEX14Q8IWB6 1497 aa22.16■■□□□ 1.14
VEGFA-201ENST00000230480 TROQ12816 1431 aaPredicted RBP22.14■■□□□ 1.14
VEGFA-201ENST00000230480 CCDC18Q5T9S5 1454 aa22.11■■□□□ 1.13
VEGFA-201ENST00000230480 ARAP3Q8WWN8 1544 aa22.1■■□□□ 1.13
VEGFA-201ENST00000230480 PLCH2O75038 1416 aa22.06■■□□□ 1.12
VEGFA-201ENST00000230480 NEO1Q92859 1461 aa22.06■■□□□ 1.12
VEGFA-201ENST00000230480 CDK11AQ9UQ88 783 aaPredicted RBP22.05■■□□□ 1.12
VEGFA-201ENST00000230480 VPS8Q8N3P4 1428 aa22.04■■□□□ 1.12
VEGFA-201ENST00000230480 FRMPD1Q5SYB0 1578 aa22.03■■□□□ 1.12
VEGFA-201ENST00000230480 CDC42BPBQ9Y5S2 1711 aa22.02■■□□□ 1.12
VEGFA-201ENST00000230480 AEBP2Q6ZN18 517 aaPredicted RBP22.01■■□□□ 1.11
VEGFA-201ENST00000230480 FANCAO15360 1455 aa22.01■■□□□ 1.11
VEGFA-201ENST00000230480 PHLDB1Q86UU1 1377 aa22■■□□□ 1.11
VEGFA-201ENST00000230480 AKNAQ7Z591 1439 aa22■■□□□ 1.11
VEGFA-201ENST00000230480 MYO5CQ9NQX4 1742 aa22■■□□□ 1.11
VEGFA-201ENST00000230480 RAPGEF3O95398 923 aa21.99■■□□□ 1.11
VEGFA-201ENST00000230480 CDC42BPAQ5VT25 1732 aa21.97■■□□□ 1.11
VEGFA-201ENST00000230480 RICTORQ6R327 1708 aa21.97■■□□□ 1.11
VEGFA-201ENST00000230480 GPATCH8Q9UKJ3 1502 aaKnown RBP21.94■■□□□ 1.1
VEGFA-201ENST00000230480 TIAM1Q13009 1591 aa21.94■■□□□ 1.1
VEGFA-201ENST00000230480 PREX2Q70Z35 1606 aa21.93■■□□□ 1.1
VEGFA-201ENST00000230480 ARHGEF12Q9NZN5 1544 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms