RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 AQRO60306 1485 aaKnown RBP eCLIP21.88■■□□□ 1.093e-7■■■■■ 30.3
PRKAB1-201ENST00000229328 FHOD3Q2V2M9 1422 aa21.86■■□□□ 1.09
PRKAB1-201ENST00000229328 WDR62O43379 1518 aa21.85■■□□□ 1.09
PRKAB1-201ENST00000229328 PBRM1Q86U86 1689 aa21.83■■□□□ 1.08
PRKAB1-201ENST00000229328 EFCAB5A4FU69 1503 aa21.83■■□□□ 1.08
PRKAB1-201ENST00000229328 FHAD1B1AJZ9 1412 aa21.82■■□□□ 1.08
PRKAB1-201ENST00000229328 TIAM1Q13009 1591 aa21.81■■□□□ 1.08
PRKAB1-201ENST00000229328 PCF11O94913 1555 aaKnown RBP21.81■■□□□ 1.08
PRKAB1-201ENST00000229328 ZNF608Q9ULD9 1512 aaPredicted RBP21.79■■□□□ 1.08
PRKAB1-201ENST00000229328 ERCC6Q03468 1493 aa21.79■■□□□ 1.08
PRKAB1-201ENST00000229328 MAP3K1Q13233 1512 aa21.79■■□□□ 1.08
PRKAB1-201ENST00000229328 IFT140Q96RY7 1462 aa21.78■■□□□ 1.08
PRKAB1-201ENST00000229328 RRBP1Q9P2E9 1410 aaKnown RBP21.76■■□□□ 1.07
PRKAB1-201ENST00000229328 ATP1B4Q9UN42 357 aaPredicted RBP21.75■■□□□ 1.07
PRKAB1-201ENST00000229328 GRIN2BQ13224 1484 aa21.74■■□□□ 1.07
PRKAB1-201ENST00000229328 ADAMTS12P58397 1594 aa21.74■■□□□ 1.07
PRKAB1-201ENST00000229328 LRRC9Q6ZRR7 1453 aa21.73■■□□□ 1.07
PRKAB1-201ENST00000229328 SAMD9Q5K651 1589 aa21.72■■□□□ 1.07
PRKAB1-201ENST00000229328 THOC2Q8NI27 1593 aaKnown RBP21.71■■□□□ 1.07
PRKAB1-201ENST00000229328 CASKIN1Q8WXD9 1431 aa21.71■■□□□ 1.07
PRKAB1-201ENST00000229328 FYCO1Q9BQS8 1478 aa21.7■■□□□ 1.06
PRKAB1-201ENST00000229328 CFAP43Q8NDM7 1665 aa21.7■■□□□ 1.06
PRKAB1-201ENST00000229328 CCNB3Q8WWL7 1395 aa21.68■■□□□ 1.06
PRKAB1-201ENST00000229328 FMN1Q68DA7 1419 aa21.67■■□□□ 1.06
PRKAB1-201ENST00000229328 SNAPC4Q5SXM2 1469 aa21.66■■□□□ 1.06
PRKAB1-201ENST00000229328 EIF4G3O43432 1585 aaKnown RBP21.64■■□□□ 1.05
PRKAB1-201ENST00000229328 PHLDB1Q86UU1 1377 aa21.63■■□□□ 1.05
PRKAB1-201ENST00000229328 IQGAP2Q13576 1575 aa21.6■■□□□ 1.05
PRKAB1-201ENST00000229328 ITGAEP38570 1179 aa21.58■■□□□ 1.04
PRKAB1-201ENST00000229328 LRRIQ1Q96JM4 1722 aa21.55■■□□□ 1.04
PRKAB1-201ENST00000229328 GRIN2AQ12879 1464 aa21.51■■□□□ 1.03
PRKAB1-201ENST00000229328 UGGT2Q9NYU1 1516 aa21.49■■□□□ 1.03
PRKAB1-201ENST00000229328 DHX57Q6P158 1386 aaKnown RBP21.48■■□□□ 1.03
PRKAB1-201ENST00000229328 KIAA0586Q9BVV6 1533 aa21.48■■□□□ 1.03
PRKAB1-201ENST00000229328 FAM50AQ14320 339 aaKnown RBP21.47■■□□□ 1.03
PRKAB1-201ENST00000229328 MAGI1Q96QZ7 1491 aaPredicted RBP21.47■■□□□ 1.03
PRKAB1-201ENST00000229328 MTUS2Q5JR59 1369 aa21.47■■□□□ 1.03
PRKAB1-201ENST00000229328 CHMP7Q8WUX9 453 aaPredicted RBP21.43■■□□□ 1.02
PRKAB1-201ENST00000229328 SYNJ2O15056 1496 aa21.43■■□□□ 1.02
PRKAB1-201ENST00000229328 DISP1Q96F81 1524 aa21.42■■□□□ 1.02
PRKAB1-201ENST00000229328 FBLN2P98095 1184 aa21.41■■□□□ 1.02
PRKAB1-201ENST00000229328 CEP170Q5SW79 1584 aa21.4■■□□□ 1.02
PRKAB1-201ENST00000229328 MAGI3Q5TCQ9 1506 aa21.4■■□□□ 1.02
PRKAB1-201ENST00000229328 KIAA0556O60303 1618 aa21.39■■□□□ 1.01
PRKAB1-201ENST00000229328 HECW1Q76N89 1606 aa21.39■■□□□ 1.01
PRKAB1-201ENST00000229328 RAB3GAP2Q9H2M9 1393 aa21.38■■□□□ 1.01
PRKAB1-201ENST00000229328 FGD6Q6ZV73 1430 aa21.38■■□□□ 1.01
PRKAB1-201ENST00000229328 NCOA2Q15596 1464 aa21.37■■□□□ 1.01
PRKAB1-201ENST00000229328 CCDC18Q5T9S5 1454 aa21.37■■□□□ 1.01
PRKAB1-201ENST00000229328 EPRSP07814 1512 aaKnown RBP21.36■■□□□ 1.01
PRKAB1-201ENST00000229328 EHBP1L1Q8N3D4 1523 aa21.36■■□□□ 1.01
PRKAB1-201ENST00000229328 CLSPNQ9HAW4 1339 aa21.35■■□□□ 1.01
PRKAB1-201ENST00000229328 CDK13Q14004 1512 aaKnown RBP21.34■■□□□ 1.01
PRKAB1-201ENST00000229328 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.34■■□□□ 1.01
PRKAB1-201ENST00000229328 ARID3CA6NKF2 412 aa21.34■■□□□ 1.01
PRKAB1-201ENST00000229328 SETD5Q9C0A6 1442 aa21.34■■□□□ 1.01
PRKAB1-201ENST00000229328 SUPT6HQ7KZ85 1726 aaKnown RBP21.33■■□□□ 1.01
PRKAB1-201ENST00000229328 NUP160Q12769 1436 aa21.31■■□□□ 1
PRKAB1-201ENST00000229328 MYOM3Q5VTT5 1437 aa21.3■■□□□ 1
PRKAB1-201ENST00000229328 ARHGEF11O15085 1522 aa21.3■■□□□ 1
PRKAB1-201ENST00000229328 ZNF316A6NFI3 1004 aaPredicted RBP21.25■□□□□ 0.99
PRKAB1-201ENST00000229328 PTPRKQ15262 1439 aa21.25■□□□□ 0.99
PRKAB1-201ENST00000229328 JPH4Q96JJ6 628 aa21.25■□□□□ 0.99
PRKAB1-201ENST00000229328 NUP153P49790 1475 aaKnown RBP21.24■□□□□ 0.99
PRKAB1-201ENST00000229328 RAPGEF6Q8TEU7 1601 aa21.23■□□□□ 0.99
PRKAB1-201ENST00000229328 MAPKBP1O60336 1514 aa21.22■□□□□ 0.99
PRKAB1-201ENST00000229328 DIEXFQ68CQ4 756 aaKnown RBP21.22■□□□□ 0.99
PRKAB1-201ENST00000229328 PTPN23Q9H3S7 1636 aa21.2■□□□□ 0.99
PRKAB1-201ENST00000229328 PLB1Q6P1J6 1458 aa21.18■□□□□ 0.98
PRKAB1-201ENST00000229328 CARMIL2Q6F5E8 1435 aa21.17■□□□□ 0.98
PRKAB1-201ENST00000229328 TCOF1Q13428 1488 aaKnown RBP21.14■□□□□ 0.98
PRKAB1-201ENST00000229328 HFM1A2PYH4 1435 aa21.12■□□□□ 0.97
PRKAB1-201ENST00000229328 MIA2Q96PC5 1412 aa21.09■□□□□ 0.97
PRKAB1-201ENST00000229328 NAIPQ13075 1403 aa21.09■□□□□ 0.97
PRKAB1-201ENST00000229328 CHD1O14646 1710 aa21.09■□□□□ 0.97
PRKAB1-201ENST00000229328 PRG4Q92954 1404 aaPredicted RBP21.09■□□□□ 0.97
PRKAB1-201ENST00000229328 CDK11AQ9UQ88 783 aaPredicted RBP21.08■□□□□ 0.96
PRKAB1-201ENST00000229328 SIN3AQ96ST3 1273 aa21.06■□□□□ 0.96
PRKAB1-201ENST00000229328 CHIC2Q9UKJ5 165 aa21.06■□□□□ 0.96
PRKAB1-201ENST00000229328 TROQ12816 1431 aaPredicted RBP21.04■□□□□ 0.96
PRKAB1-201ENST00000229328 ABCA8O94911 1581 aa21.04■□□□□ 0.96
PRKAB1-201ENST00000229328 RRP7BPQ9NSQ0 103 aa21.03■□□□□ 0.96
PRKAB1-201ENST00000229328 NEUROD1Q13562 356 aa21.01■□□□□ 0.95
PRKAB1-201ENST00000229328 ZNF644Q9H582 1327 aaPredicted RBP21.01■□□□□ 0.95
PRKAB1-201ENST00000229328 UACAQ9BZF9 1416 aa20.99■□□□□ 0.95
PRKAB1-201ENST00000229328 KIF14Q15058 1648 aa20.99■□□□□ 0.95
PRKAB1-201ENST00000229328 ATP10BO94823 1461 aa20.97■□□□□ 0.95
PRKAB1-201ENST00000229328 PTPRGP23470 1445 aa20.96■□□□□ 0.95
PRKAB1-201ENST00000229328 ADCY10Q96PN6 1610 aa20.95■□□□□ 0.94
PRKAB1-201ENST00000229328 GCC2Q8IWJ2 1684 aa20.95■□□□□ 0.94
PRKAB1-201ENST00000229328 DAPK1P53355 1430 aa20.95■□□□□ 0.94
PRKAB1-201ENST00000229328 KDM6BO15054 1643 aa20.95■□□□□ 0.94
PRKAB1-201ENST00000229328 GPATCH8Q9UKJ3 1502 aaKnown RBP20.94■□□□□ 0.94
PRKAB1-201ENST00000229328 ABCC5O15440 1437 aa20.93■□□□□ 0.94
PRKAB1-201ENST00000229328 AKNAQ7Z591 1439 aa20.93■□□□□ 0.94
PRKAB1-201ENST00000229328 SHROOM2Q13796 1616 aa20.93■□□□□ 0.94
PRKAB1-201ENST00000229328 PLEKHD1A6NEE1 506 aa20.91■□□□□ 0.94
PRKAB1-201ENST00000229328 DNMT1P26358 1616 aaKnown RBP20.91■□□□□ 0.94
PRKAB1-201ENST00000229328 CFDP1Q9UEE9 299 aaPredicted RBP20.91■□□□□ 0.94
PRKAB1-201ENST00000229328 ERCC6L2Q5T890 1561 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms