RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 CUL7Q14999 1698 aa24.39■■□□□ 1.5
GPN3-201ENST00000228827 CARMIL1Q5VZK9 1371 aa24.38■■□□□ 1.49
GPN3-201ENST00000228827 RUSC2Q8N2Y8 1516 aa24.38■■□□□ 1.49
GPN3-201ENST00000228827 KIAA0586Q9BVV6 1533 aa24.3■■□□□ 1.48
GPN3-201ENST00000228827 RAPGEF2Q9Y4G8 1499 aa24.18■■□□□ 1.46
GPN3-201ENST00000228827 TTBK1Q5TCY1 1321 aaPredicted RBP24.13■■□□□ 1.45
GPN3-201ENST00000228827 IQGAP2Q13576 1575 aa24.11■■□□□ 1.45
GPN3-201ENST00000228827 CARMIL2Q6F5E8 1435 aa24.07■■□□□ 1.44
GPN3-201ENST00000228827 NPM1P06748 294 aaKnown RBP eCLIP24.06■■□□□ 1.44
GPN3-201ENST00000228827 PTPRGP23470 1445 aa24.05■■□□□ 1.44
GPN3-201ENST00000228827 TNIKQ9UKE5 1360 aa24.03■■□□□ 1.44
GPN3-201ENST00000228827 ADCY10Q96PN6 1610 aa24.02■■□□□ 1.44
GPN3-201ENST00000228827 DISP1Q96F81 1524 aa23.99■■□□□ 1.43
GPN3-201ENST00000228827 PRXQ9BXM0 1461 aa23.99■■□□□ 1.43
GPN3-201ENST00000228827 UGGT2Q9NYU1 1516 aa23.96■■□□□ 1.43
GPN3-201ENST00000228827 CSRNP3Q8WYN3 585 aa23.94■■□□□ 1.42
GPN3-201ENST00000228827 MAPKBP1O60336 1514 aa23.91■■□□□ 1.42
GPN3-201ENST00000228827 FAM69CQ0P6D2 419 aa23.91■■□□□ 1.42
GPN3-201ENST00000228827 KIAA0556O60303 1618 aa23.89■■□□□ 1.41
GPN3-201ENST00000228827 FAM9AQ8IZU1 332 aaPredicted RBP23.88■■□□□ 1.41
GPN3-201ENST00000228827 ABCC10Q5T3U5 1492 aa23.88■■□□□ 1.41
GPN3-201ENST00000228827 CTTNBP2Q8WZ74 1663 aa23.88■■□□□ 1.41
GPN3-201ENST00000228827 UACAQ9BZF9 1416 aa23.87■■□□□ 1.41
GPN3-201ENST00000228827 ABCC2Q92887 1545 aa23.85■■□□□ 1.41
GPN3-201ENST00000228827 KIF13AQ9H1H9 1805 aa23.85■■□□□ 1.41
GPN3-201ENST00000228827 EEA1Q15075 1411 aa23.84■■□□□ 1.41
GPN3-201ENST00000228827 UHRF1BP1LA0JNW5 1464 aa23.82■■□□□ 1.4
GPN3-201ENST00000228827 DIP2BQ9P265 1576 aa23.81■■□□□ 1.4
GPN3-201ENST00000228827 GOLGA3Q08378 1498 aa23.81■■□□□ 1.4
GPN3-201ENST00000228827 CHIC1Q5VXU3 224 aa23.81■■□□□ 1.4
GPN3-201ENST00000228827 ASXL2Q76L83 1435 aa23.77■■□□□ 1.4
GPN3-201ENST00000228827 P3H3Q8IVL6 736 aa23.75■■□□□ 1.39
GPN3-201ENST00000228827 PLB1Q6P1J6 1458 aa23.73■■□□□ 1.39
GPN3-201ENST00000228827 KDM5BQ9UGL1 1544 aa23.72■■□□□ 1.39
GPN3-201ENST00000228827 RANGAP1P46060 587 aaPredicted RBP23.71■■□□□ 1.39
GPN3-201ENST00000228827 EHMT2Q96KQ7 1210 aa23.67■■□□□ 1.38
GPN3-201ENST00000228827 ZCCHC11Q5TAX3 1644 aaKnown RBP23.66■■□□□ 1.38
GPN3-201ENST00000228827 ABCA8O94911 1581 aa23.64■■□□□ 1.38
GPN3-201ENST00000228827 EPRSP07814 1512 aaKnown RBP23.61■■□□□ 1.37
GPN3-201ENST00000228827 ARID3CA6NKF2 412 aa23.61■■□□□ 1.37
GPN3-201ENST00000228827 KIF21BO75037 1637 aa23.6■■□□□ 1.37
GPN3-201ENST00000228827 TSPOAP1O95153 1857 aa23.6■■□□□ 1.37
GPN3-201ENST00000228827 SAMD9Q5K651 1589 aa23.6■■□□□ 1.37
GPN3-201ENST00000228827 GLI2P10070 1586 aa23.59■■□□□ 1.37
GPN3-201ENST00000228827 WDR7Q9Y4E6 1490 aa23.57■■□□□ 1.36
GPN3-201ENST00000228827 FHOD3Q2V2M9 1422 aa23.54■■□□□ 1.36
GPN3-201ENST00000228827 UBTFP17480 764 aaKnown RBP23.54■■□□□ 1.36
GPN3-201ENST00000228827 KCNH8Q96L42 1107 aa23.54■■□□□ 1.36
GPN3-201ENST00000228827 KDM6BO15054 1643 aa23.53■■□□□ 1.36
GPN3-201ENST00000228827 PPRC1Q5VV67 1664 aaKnown RBP23.48■■□□□ 1.35
GPN3-201ENST00000228827 ATP10BO94823 1461 aa23.48■■□□□ 1.35
GPN3-201ENST00000228827 MAP3K4Q9Y6R4 1608 aa23.47■■□□□ 1.35
GPN3-201ENST00000228827 AEBP2Q6ZN18 517 aaPredicted RBP23.46■■□□□ 1.35
GPN3-201ENST00000228827 RAPGEF6Q8TEU7 1601 aa23.45■■□□□ 1.35
GPN3-201ENST00000228827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.45■■□□□ 1.34
GPN3-201ENST00000228827 HNRNPUL2Q1KMD3 747 aaKnown RBP23.45■■□□□ 1.34
GPN3-201ENST00000228827 EFCAB5A4FU69 1503 aa23.43■■□□□ 1.34
GPN3-201ENST00000228827 TEX14Q8IWB6 1497 aa23.42■■□□□ 1.34
GPN3-201ENST00000228827 CD109Q6YHK3 1445 aa23.41■■□□□ 1.34
GPN3-201ENST00000228827 NUP153P49790 1475 aaKnown RBP23.4■■□□□ 1.34
GPN3-201ENST00000228827 COL17A1Q9UMD9 1497 aaPredicted RBP23.37■■□□□ 1.33
GPN3-201ENST00000228827 MAGI3Q5TCQ9 1506 aa23.34■■□□□ 1.33
GPN3-201ENST00000228827 CFAP43Q8NDM7 1665 aa23.33■■□□□ 1.33
GPN3-201ENST00000228827 ARHGAP35Q9NRY4 1499 aa23.31■■□□□ 1.32
GPN3-201ENST00000228827 ATP1B4Q9UN42 357 aaPredicted RBP23.29■■□□□ 1.32
GPN3-201ENST00000228827 PLEKHD1A6NEE1 506 aa23.28■■□□□ 1.32
GPN3-201ENST00000228827 FMN1Q68DA7 1419 aa23.25■■□□□ 1.31
GPN3-201ENST00000228827 ABCA9Q8IUA7 1624 aa23.24■■□□□ 1.31
GPN3-201ENST00000228827 CDK13Q14004 1512 aaKnown RBP23.23■■□□□ 1.31
GPN3-201ENST00000228827 KDM4FA0A1W2PPD8 638 aa23.22■■□□□ 1.31
GPN3-201ENST00000228827 HECW1Q76N89 1606 aa23.16■■□□□ 1.3
GPN3-201ENST00000228827 ARAP3Q8WWN8 1544 aa23.13■■□□□ 1.29
GPN3-201ENST00000228827 PHLDB1Q86UU1 1377 aa23.12■■□□□ 1.29
GPN3-201ENST00000228827 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.11■■□□□ 1.29
GPN3-201ENST00000228827 NEO1Q92859 1461 aa23.11■■□□□ 1.29
GPN3-201ENST00000228827 RAPGEF3O95398 923 aa23.1■■□□□ 1.29
GPN3-201ENST00000228827 CLIP1P30622 1438 aa23.09■■□□□ 1.29
GPN3-201ENST00000228827 ADGRL1O94910 1474 aa23.08■■□□□ 1.29
GPN3-201ENST00000228827 CDK11AQ9UQ88 783 aaPredicted RBP23.08■■□□□ 1.29
GPN3-201ENST00000228827 TTC37Q6PGP7 1564 aa23.08■■□□□ 1.28
GPN3-201ENST00000228827 FANCAO15360 1455 aa23.04■■□□□ 1.28
GPN3-201ENST00000228827 PCF11O94913 1555 aaKnown RBP23.04■■□□□ 1.28
GPN3-201ENST00000228827 CASKIN1Q8WXD9 1431 aa23.03■■□□□ 1.28
GPN3-201ENST00000228827 AKNAQ7Z591 1439 aa23.02■■□□□ 1.28
GPN3-201ENST00000228827 TROQ12816 1431 aaPredicted RBP23■■□□□ 1.27
GPN3-201ENST00000228827 FRMPD1Q5SYB0 1578 aa22.98■■□□□ 1.27
GPN3-201ENST00000228827 PLCH2O75038 1416 aa22.98■■□□□ 1.27
GPN3-201ENST00000228827 DENND4BO75064 1496 aaPredicted RBP22.98■■□□□ 1.27
GPN3-201ENST00000228827 LRRIQ1Q96JM4 1722 aa22.98■■□□□ 1.27
GPN3-201ENST00000228827 KIF14Q15058 1648 aa22.97■■□□□ 1.27
GPN3-201ENST00000228827 CFAP74Q9C0B2 1584 aa22.97■■□□□ 1.27
GPN3-201ENST00000228827 CCDC18Q5T9S5 1454 aa22.96■■□□□ 1.27
GPN3-201ENST00000228827 FYCO1Q9BQS8 1478 aa22.95■■□□□ 1.26
GPN3-201ENST00000228827 EFCAB2Q5VUJ9 269 aa22.92■■□□□ 1.26
GPN3-201ENST00000228827 SCAPERQ9BY12 1400 aa22.91■■□□□ 1.26
GPN3-201ENST00000228827 CEP162Q5TB80 1403 aa22.9■■□□□ 1.26
GPN3-201ENST00000228827 ARID4BQ4LE39 1312 aaPredicted RBP22.87■■□□□ 1.25
GPN3-201ENST00000228827 RICTORQ6R327 1708 aa22.87■■□□□ 1.25
GPN3-201ENST00000228827 LOC105371045A0A1W2PR82 267 aa22.87■■□□□ 1.25
GPN3-201ENST00000228827 MYO5CQ9NQX4 1742 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms