RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 FANCIQ9NVI1 1328 aa19.79■□□□□ 0.76
SHPK-201ENST00000225519 WDR97A6NE52 1622 aa19.78■□□□□ 0.76
SHPK-201ENST00000225519 CUX2O14529 1486 aa19.77■□□□□ 0.76
SHPK-201ENST00000225519 MAPKBP1O60336 1514 aa19.73■□□□□ 0.75
SHPK-201ENST00000225519 MYT1LQ9UL68 1186 aa19.72■□□□□ 0.75
SHPK-201ENST00000225519 TONSLQ96HA7 1378 aa19.7■□□□□ 0.74
SHPK-201ENST00000225519 TIMELESSQ9UNS1 1208 aa19.7■□□□□ 0.74
SHPK-201ENST00000225519 PRXQ9BXM0 1461 aa19.7■□□□□ 0.74
SHPK-201ENST00000225519 DEKP35659 375 aaKnown RBP19.7■□□□□ 0.74
SHPK-201ENST00000225519 ERICH3Q5RHP9 1530 aa19.69■□□□□ 0.74
SHPK-201ENST00000225519 NBR1Q14596 966 aa19.65■□□□□ 0.74
SHPK-201ENST00000225519 KIF27Q86VH2 1401 aa19.65■□□□□ 0.74
SHPK-201ENST00000225519 PPP4R2Q9NY27 417 aa19.64■□□□□ 0.73
SHPK-201ENST00000225519 TOP2BQ02880 1626 aa19.62■□□□□ 0.73
SHPK-201ENST00000225519 ARHGAP35Q9NRY4 1499 aa19.61■□□□□ 0.73
SHPK-201ENST00000225519 P3H3Q8IVL6 736 aa19.61■□□□□ 0.73
SHPK-201ENST00000225519 B4GALNT3Q6L9W6 998 aa19.6■□□□□ 0.73
SHPK-201ENST00000225519 ATAD2BQ9ULI0 1458 aa19.58■□□□□ 0.73
SHPK-201ENST00000225519 PHLDB1Q86UU1 1377 aa19.56■□□□□ 0.72
SHPK-201ENST00000225519 UNC13AQ9UPW8 1703 aa19.56■□□□□ 0.72
SHPK-201ENST00000225519 FAM9BQ8IZU0 186 aa19.55■□□□□ 0.72
SHPK-201ENST00000225519 NOP58Q9Y2X3 529 aaKnown RBP19.54■□□□□ 0.72
SHPK-201ENST00000225519 ERICH6BQ5W0A0 696 aa19.53■□□□□ 0.72
SHPK-201ENST00000225519 RTL5Q5HYW3 569 aaPredicted RBP19.53■□□□□ 0.72
SHPK-201ENST00000225519 PEG3Q9GZU2 1588 aa19.51■□□□□ 0.71
SHPK-201ENST00000225519 LRRC9Q6ZRR7 1453 aa19.48■□□□□ 0.71
SHPK-201ENST00000225519 TIAM1Q13009 1591 aa19.47■□□□□ 0.71
SHPK-201ENST00000225519 PRKCSHP14314 528 aaPredicted RBP19.45■□□□□ 0.7
SHPK-201ENST00000225519 ANP32AP39687 249 aaKnown RBP19.45■□□□□ 0.7
SHPK-201ENST00000225519 MRS2Q9HD23 443 aa19.45■□□□□ 0.7
SHPK-201ENST00000225519 CNGB1Q14028 1251 aaPredicted RBP19.44■□□□□ 0.7
SHPK-201ENST00000225519 BIVM-ERCC5R4GMW8 1640 aa19.43■□□□□ 0.7
SHPK-201ENST00000225519 HSPA5P11021 654 aaKnown RBP19.41■□□□□ 0.7
SHPK-201ENST00000225519 PAK3O75914 559 aaPredicted RBP19.41■□□□□ 0.7
SHPK-201ENST00000225519 FHAD1B1AJZ9 1412 aa19.39■□□□□ 0.69
SHPK-201ENST00000225519 EIF4G2P78344 907 aaKnown RBP eCLIP19.38■□□□□ 0.69
SHPK-201ENST00000225519 ZBTB47Q9UFB7 747 aaPredicted RBP19.38■□□□□ 0.69
SHPK-201ENST00000225519 CCDC184Q52MB2 194 aa19.38■□□□□ 0.69
SHPK-201ENST00000225519 CUX1P39880 1505 aa19.37■□□□□ 0.69
SHPK-201ENST00000225519 CCDC136Q96JN2 1154 aa19.37■□□□□ 0.69
SHPK-201ENST00000225519 BICRAQ9NZM4 1560 aa19.37■□□□□ 0.69
SHPK-201ENST00000225519 WASHC2AQ641Q2 1341 aa19.36■□□□□ 0.69
SHPK-201ENST00000225519 CARMIL1Q5VZK9 1371 aa19.35■□□□□ 0.69
SHPK-201ENST00000225519 MAP3K1Q13233 1512 aa19.34■□□□□ 0.69
SHPK-201ENST00000225519 CCDC18Q5T9S5 1454 aa19.33■□□□□ 0.68
SHPK-201ENST00000225519 IGF1RP08069 1367 aa19.31■□□□□ 0.68
SHPK-201ENST00000225519 ANO8Q9HCE9 1232 aaPredicted RBP19.31■□□□□ 0.68
SHPK-201ENST00000225519 POLR3GLQ9BT43 218 aa19.3■□□□□ 0.68
SHPK-201ENST00000225519 ZBED9Q6R2W3 1325 aa19.29■□□□□ 0.68
SHPK-201ENST00000225519 NPM2Q86SE8 214 aaKnown RBP19.29■□□□□ 0.68
SHPK-201ENST00000225519 IPO9Q96P70 1041 aaKnown RBP19.29■□□□□ 0.68
SHPK-201ENST00000225519 PRKRIP1Q9H875 184 aaPredicted RBP19.29■□□□□ 0.68
SHPK-201ENST00000225519 FBLN2P98095 1184 aa19.27■□□□□ 0.68
SHPK-201ENST00000225519 RTN4Q9NQC3 1192 aaKnown RBP19.27■□□□□ 0.68
SHPK-201ENST00000225519 MTUS2Q5JR59 1369 aa19.27■□□□□ 0.68
SHPK-201ENST00000225519 UACAQ9BZF9 1416 aa19.27■□□□□ 0.67
SHPK-201ENST00000225519 SENP3-EIF4A1A0A087X0R7 540 aa19.26■□□□□ 0.67
SHPK-201ENST00000225519 FHOD3Q2V2M9 1422 aa19.26■□□□□ 0.67
SHPK-201ENST00000225519 RRP7BPQ9NSQ0 103 aa19.26■□□□□ 0.67
SHPK-201ENST00000225519 CHIC2Q9UKJ5 165 aa19.26■□□□□ 0.67
SHPK-201ENST00000225519 CNTLNQ9NXG0 1405 aa19.23■□□□□ 0.67
SHPK-201ENST00000225519 FGD6Q6ZV73 1430 aa19.21■□□□□ 0.67
SHPK-201ENST00000225519 PCF11O94913 1555 aaKnown RBP19.2■□□□□ 0.66
SHPK-201ENST00000225519 SALL2Q9Y467 1007 aaPredicted RBP19.18■□□□□ 0.66
SHPK-201ENST00000225519 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.18■□□□□ 0.66
SHPK-201ENST00000225519 IL27Q8NEV9 243 aa19.17■□□□□ 0.66
SHPK-201ENST00000225519 LAS1LQ9Y4W2 734 aaKnown RBP19.17■□□□□ 0.66
SHPK-201ENST00000225519 HFM1A2PYH4 1435 aa19.17■□□□□ 0.66
SHPK-201ENST00000225519 FMN1Q68DA7 1419 aa19.16■□□□□ 0.66
SHPK-201ENST00000225519 AKNAQ7Z591 1439 aa19.16■□□□□ 0.66
SHPK-201ENST00000225519 C11orf95C9JLR9 678 aaPredicted RBP19.15■□□□□ 0.66
SHPK-201ENST00000225519 L3MBTL2Q969R5 705 aa19.15■□□□□ 0.66
SHPK-201ENST00000225519 CCDC7Q96M83 1385 aa19.15■□□□□ 0.66
SHPK-201ENST00000225519 NUDCQ9Y266 331 aa19.14■□□□□ 0.66
SHPK-201ENST00000225519 NEFMP07197 916 aa19.13■□□□□ 0.65
SHPK-201ENST00000225519 ERCC6Q03468 1493 aa19.13■□□□□ 0.65
SHPK-201ENST00000225519 FOXD1Q16676 465 aa19.12■□□□□ 0.65
SHPK-201ENST00000225519 PTPRKQ15262 1439 aa19.11■□□□□ 0.65
SHPK-201ENST00000225519 CFAP43Q8NDM7 1665 aa19.11■□□□□ 0.65
SHPK-201ENST00000225519 NAIPQ13075 1403 aa19.11■□□□□ 0.65
SHPK-201ENST00000225519 FYCO1Q9BQS8 1478 aa19.1■□□□□ 0.65
SHPK-201ENST00000225519 AQRO60306 1485 aaKnown RBP eCLIP19.09■□□□□ 0.651e-9■■■■□ 23.6
SHPK-201ENST00000225519 CASKIN1Q8WXD9 1431 aa19.09■□□□□ 0.65
SHPK-201ENST00000225519 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.08■□□□□ 0.64
SHPK-201ENST00000225519 PTPN23Q9H3S7 1636 aa19.08■□□□□ 0.64
SHPK-201ENST00000225519 ZNF326Q5BKZ1 582 aaKnown RBP19.07■□□□□ 0.64
SHPK-201ENST00000225519 CFTRP13569 1480 aa19.07■□□□□ 0.64
SHPK-201ENST00000225519 MPHOSPH9Q99550 1183 aa19.06■□□□□ 0.64
SHPK-201ENST00000225519 NCOA2Q15596 1464 aa19.05■□□□□ 0.64
SHPK-201ENST00000225519 TMC1Q8TDI8 760 aa19.05■□□□□ 0.64
SHPK-201ENST00000225519 KIF7Q2M1P5 1343 aa19.05■□□□□ 0.64
SHPK-201ENST00000225519 SMG6Q86US8 1419 aaKnown RBP19.05■□□□□ 0.64
SHPK-201ENST00000225519 FGD5Q6ZNL6 1462 aa19.05■□□□□ 0.64
SHPK-201ENST00000225519 NCOA1Q15788 1441 aa19.02■□□□□ 0.64
SHPK-201ENST00000225519 MYOM3Q5VTT5 1437 aa19■□□□□ 0.63
SHPK-201ENST00000225519 CC2D2AQ9P2K1 1620 aa18.99■□□□□ 0.63
SHPK-201ENST00000225519 PPM1GO15355 546 aaPredicted RBP18.99■□□□□ 0.63
SHPK-201ENST00000225519 NBPF8Q3BBV2 869 aa18.99■□□□□ 0.63
SHPK-201ENST00000225519 NCAPD3P42695 1498 aa18.99■□□□□ 0.63
SHPK-201ENST00000225519 DAXXQ9UER7 740 aaPredicted RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms