RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 ANP32CO43423 234 aa20.25■□□□□ 0.83
SFXN3-201ENST00000224807 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
SFXN3-201ENST00000224807 MSH5O43196 834 aa20.23■□□□□ 0.83
SFXN3-201ENST00000224807 HNRNPUQ00839 825 aaKnown RBP eCLIP20.22■□□□□ 0.83
SFXN3-201ENST00000224807 CUX2O14529 1486 aa20.2■□□□□ 0.82
SFXN3-201ENST00000224807 NBR1Q14596 966 aa20.16■□□□□ 0.82
SFXN3-201ENST00000224807 CCNB3Q8WWL7 1395 aa20.15■□□□□ 0.82
SFXN3-201ENST00000224807 RAB3GAP2Q9H2M9 1393 aa20.14■□□□□ 0.81
SFXN3-201ENST00000224807 CDK11AQ9UQ88 783 aaPredicted RBP20.13■□□□□ 0.81
SFXN3-201ENST00000224807 ARHGAP35Q9NRY4 1499 aa20.08■□□□□ 0.8
SFXN3-201ENST00000224807 MAPKBP1O60336 1514 aa20.06■□□□□ 0.8
SFXN3-201ENST00000224807 CUX1P39880 1505 aa20.06■□□□□ 0.8
SFXN3-201ENST00000224807 KIF27Q86VH2 1401 aa20.04■□□□□ 0.8
SFXN3-201ENST00000224807 B4GALNT3Q6L9W6 998 aa20.04■□□□□ 0.8
SFXN3-201ENST00000224807 FAM9BQ8IZU0 186 aa20.02■□□□□ 0.8
SFXN3-201ENST00000224807 POLR3GLQ9BT43 218 aa19.99■□□□□ 0.79
SFXN3-201ENST00000224807 PPP1R15AO75807 674 aaPredicted RBP19.99■□□□□ 0.79
SFXN3-201ENST00000224807 WDR97A6NE52 1622 aa19.95■□□□□ 0.78
SFXN3-201ENST00000224807 DEKP35659 375 aaKnown RBP19.93■□□□□ 0.78
SFXN3-201ENST00000224807 SETD5Q9C0A6 1442 aa19.92■□□□□ 0.78
SFXN3-201ENST00000224807 TIAM1Q13009 1591 aa19.92■□□□□ 0.78
SFXN3-201ENST00000224807 TONSLQ96HA7 1378 aa19.89■□□□□ 0.78
SFXN3-201ENST00000224807 RTN4Q9NQC3 1192 aaKnown RBP19.88■□□□□ 0.77
SFXN3-201ENST00000224807 MAP3K1Q13233 1512 aa19.87■□□□□ 0.77
SFXN3-201ENST00000224807 CCDC184Q52MB2 194 aa19.87■□□□□ 0.77
SFXN3-201ENST00000224807 PHLDB1Q86UU1 1377 aa19.87■□□□□ 0.77
SFXN3-201ENST00000224807 HMGXB3Q12766 1538 aa19.85■□□□□ 0.77
SFXN3-201ENST00000224807 LRRC9Q6ZRR7 1453 aa19.85■□□□□ 0.77
SFXN3-201ENST00000224807 CHIC2Q9UKJ5 165 aa19.84■□□□□ 0.77
SFXN3-201ENST00000224807 NCAPD3P42695 1498 aa19.83■□□□□ 0.77
SFXN3-201ENST00000224807 CFTRP13569 1480 aa19.83■□□□□ 0.76
SFXN3-201ENST00000224807 ARID3CA6NKF2 412 aa19.82■□□□□ 0.76
SFXN3-201ENST00000224807 IGF1RP08069 1367 aa19.82■□□□□ 0.76
SFXN3-201ENST00000224807 CCER2I3L3R5 266 aa19.82■□□□□ 0.76
SFXN3-201ENST00000224807 NPM2Q86SE8 214 aaKnown RBP19.82■□□□□ 0.76
SFXN3-201ENST00000224807 PAK3O75914 559 aaPredicted RBP19.79■□□□□ 0.76
SFXN3-201ENST00000224807 MRS2Q9HD23 443 aa19.77■□□□□ 0.76
SFXN3-201ENST00000224807 TIMELESSQ9UNS1 1208 aa19.74■□□□□ 0.75
SFXN3-201ENST00000224807 FOXD1Q16676 465 aa19.74■□□□□ 0.75
SFXN3-201ENST00000224807 RRP7BPQ9NSQ0 103 aa19.74■□□□□ 0.75
SFXN3-201ENST00000224807 CARMIL1Q5VZK9 1371 aa19.74■□□□□ 0.75
SFXN3-201ENST00000224807 CFAP43Q8NDM7 1665 aa19.73■□□□□ 0.75
SFXN3-201ENST00000224807 FANCIQ9NVI1 1328 aa19.72■□□□□ 0.75
SFXN3-201ENST00000224807 SALL2Q9Y467 1007 aaPredicted RBP19.72■□□□□ 0.75
SFXN3-201ENST00000224807 PPP4R2Q9NY27 417 aa19.71■□□□□ 0.75
SFXN3-201ENST00000224807 PCF11O94913 1555 aaKnown RBP19.71■□□□□ 0.75
SFXN3-201ENST00000224807 CCDC136Q96JN2 1154 aa19.71■□□□□ 0.75
SFXN3-201ENST00000224807 ANO8Q9HCE9 1232 aaPredicted RBP19.71■□□□□ 0.75
SFXN3-201ENST00000224807 ZNF326Q5BKZ1 582 aaKnown RBP19.7■□□□□ 0.74
SFXN3-201ENST00000224807 HSPA5P11021 654 aaKnown RBP19.7■□□□□ 0.74
SFXN3-201ENST00000224807 FHAD1B1AJZ9 1412 aa19.69■□□□□ 0.74
SFXN3-201ENST00000224807 NOP58Q9Y2X3 529 aaKnown RBP19.69■□□□□ 0.74
SFXN3-201ENST00000224807 RTL5Q5HYW3 569 aaPredicted RBP19.68■□□□□ 0.74
SFXN3-201ENST00000224807 PRDM2Q13029 1718 aa19.65■□□□□ 0.74
SFXN3-201ENST00000224807 FGD5Q6ZNL6 1462 aa19.63■□□□□ 0.73
SFXN3-201ENST00000224807 LAS1LQ9Y4W2 734 aaKnown RBP19.62■□□□□ 0.73
SFXN3-201ENST00000224807 PRKCSHP14314 528 aaPredicted RBP19.62■□□□□ 0.73
SFXN3-201ENST00000224807 WASHC2AQ641Q2 1341 aa19.62■□□□□ 0.73
SFXN3-201ENST00000224807 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.62■□□□□ 0.73
SFXN3-201ENST00000224807 FHOD3Q2V2M9 1422 aa19.6■□□□□ 0.73
SFXN3-201ENST00000224807 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.59■□□□□ 0.73
SFXN3-201ENST00000224807 ANP32AP39687 249 aaKnown RBP19.58■□□□□ 0.73
SFXN3-201ENST00000224807 IL27Q8NEV9 243 aa19.57■□□□□ 0.72
SFXN3-201ENST00000224807 FYCO1Q9BQS8 1478 aa19.56■□□□□ 0.72
SFXN3-201ENST00000224807 C11orf95C9JLR9 678 aaPredicted RBP19.56■□□□□ 0.72
SFXN3-201ENST00000224807 EIF4G2P78344 907 aaKnown RBP eCLIP19.56■□□□□ 0.72
SFXN3-201ENST00000224807 ZBTB47Q9UFB7 747 aaPredicted RBP19.56■□□□□ 0.72
SFXN3-201ENST00000224807 CCDC18Q5T9S5 1454 aa19.54■□□□□ 0.72
SFXN3-201ENST00000224807 CASKIN1Q8WXD9 1431 aa19.53■□□□□ 0.72
SFXN3-201ENST00000224807 FGD6Q6ZV73 1430 aa19.53■□□□□ 0.72
SFXN3-201ENST00000224807 CADPSQ9ULU8 1353 aa19.52■□□□□ 0.71
SFXN3-201ENST00000224807 PTPRKQ15262 1439 aa19.51■□□□□ 0.71
SFXN3-201ENST00000224807 UACAQ9BZF9 1416 aa19.5■□□□□ 0.71
SFXN3-201ENST00000224807 AQRO60306 1485 aaKnown RBP eCLIP19.49■□□□□ 0.71
SFXN3-201ENST00000224807 EFCAB5A4FU69 1503 aa19.48■□□□□ 0.71
SFXN3-201ENST00000224807 MTUS2Q5JR59 1369 aa19.48■□□□□ 0.71
SFXN3-201ENST00000224807 PRKRIP1Q9H875 184 aaPredicted RBP19.48■□□□□ 0.71
SFXN3-201ENST00000224807 HFM1A2PYH4 1435 aa19.48■□□□□ 0.71
SFXN3-201ENST00000224807 AKNAQ7Z591 1439 aa19.47■□□□□ 0.71
SFXN3-201ENST00000224807 PTPN23Q9H3S7 1636 aa19.47■□□□□ 0.71
SFXN3-201ENST00000224807 KDM5BQ9UGL1 1544 aa19.47■□□□□ 0.71
SFXN3-201ENST00000224807 L3MBTL2Q969R5 705 aa19.46■□□□□ 0.71
SFXN3-201ENST00000224807 SKAP1Q86WV1 359 aa19.44■□□□□ 0.7
SFXN3-201ENST00000224807 NAIPQ13075 1403 aa19.43■□□□□ 0.7
SFXN3-201ENST00000224807 SNAPC4Q5SXM2 1469 aa19.41■□□□□ 0.7
SFXN3-201ENST00000224807 RAD54L2Q9Y4B4 1467 aa19.41■□□□□ 0.7
SFXN3-201ENST00000224807 NEFMP07197 916 aa19.4■□□□□ 0.7
SFXN3-201ENST00000224807 IPO9Q96P70 1041 aaKnown RBP19.39■□□□□ 0.69
SFXN3-201ENST00000224807 FMN1Q68DA7 1419 aa19.39■□□□□ 0.69
SFXN3-201ENST00000224807 EIF5BO60841 1220 aaKnown RBP19.39■□□□□ 0.69
SFXN3-201ENST00000224807 CTTNBP2Q8WZ74 1663 aa19.38■□□□□ 0.69
SFXN3-201ENST00000224807 ABCA10Q8WWZ4 1543 aa19.36■□□□□ 0.69
SFXN3-201ENST00000224807 MYT1LQ9UL68 1186 aa19.36■□□□□ 0.69
SFXN3-201ENST00000224807 FANCD2Q9BXW9 1451 aa19.35■□□□□ 0.69
SFXN3-201ENST00000224807 LRRIQ1Q96JM4 1722 aa19.35■□□□□ 0.69
SFXN3-201ENST00000224807 NCOA2Q15596 1464 aa19.34■□□□□ 0.69
SFXN3-201ENST00000224807 SLC4A3P48751 1232 aa19.34■□□□□ 0.69
SFXN3-201ENST00000224807 CC2D2AQ9P2K1 1620 aa19.34■□□□□ 0.69
SFXN3-201ENST00000224807 MYOM3Q5VTT5 1437 aa19.34■□□□□ 0.69
SFXN3-201ENST00000224807 TMC1Q8TDI8 760 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms