RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 ARAP1Q96P48 1450 aa23.81■■□□□ 1.4
PAF1-201ENST00000221265 MAGI1Q96QZ7 1491 aaPredicted RBP23.78■■□□□ 1.4
PAF1-201ENST00000221265 PPARGC1BQ86YN6 1023 aaKnown RBP23.77■■□□□ 1.4
PAF1-201ENST00000221265 VPS8Q8N3P4 1428 aa23.76■■□□□ 1.39
PAF1-201ENST00000221265 GRIN2AQ12879 1464 aa23.73■■□□□ 1.39
PAF1-201ENST00000221265 SYNJ2O15056 1496 aa23.72■■□□□ 1.39
PAF1-201ENST00000221265 TRIM26Q12899 539 aaPredicted RBP23.71■■□□□ 1.39
PAF1-201ENST00000221265 FBLN2P98095 1184 aa23.68■■□□□ 1.38
PAF1-201ENST00000221265 P3H3Q8IVL6 736 aa23.68■■□□□ 1.38
PAF1-201ENST00000221265 CHMP7Q8WUX9 453 aaPredicted RBP23.68■■□□□ 1.38
PAF1-201ENST00000221265 IQGAP2Q13576 1575 aa23.64■■□□□ 1.38
PAF1-201ENST00000221265 CEP170Q5SW79 1584 aa23.62■■□□□ 1.37
PAF1-201ENST00000221265 EFCAB5A4FU69 1503 aa23.62■■□□□ 1.37
PAF1-201ENST00000221265 FHOD3Q2V2M9 1422 aa23.62■■□□□ 1.37
PAF1-201ENST00000221265 SAMD9Q5K651 1589 aa23.6■■□□□ 1.37
PAF1-201ENST00000221265 TTBK1Q5TCY1 1321 aaPredicted RBP23.6■■□□□ 1.37
PAF1-201ENST00000221265 KIAA0586Q9BVV6 1533 aa23.57■■□□□ 1.36
PAF1-201ENST00000221265 CHD1O14646 1710 aa23.57■■□□□ 1.36
PAF1-201ENST00000221265 NUP160Q12769 1436 aa23.54■■□□□ 1.36
PAF1-201ENST00000221265 UGGT2Q9NYU1 1516 aa23.5■■□□□ 1.35
PAF1-201ENST00000221265 PCF11O94913 1555 aaKnown RBP23.49■■□□□ 1.35
PAF1-201ENST00000221265 APLP2Q06481 763 aa23.48■■□□□ 1.35
PAF1-201ENST00000221265 DISP1Q96F81 1524 aa23.44■■□□□ 1.34
PAF1-201ENST00000221265 KIAA0556O60303 1618 aa23.41■■□□□ 1.34
PAF1-201ENST00000221265 FMN1Q68DA7 1419 aa23.41■■□□□ 1.34
PAF1-201ENST00000221265 KANK4Q5T7N3 995 aaPredicted RBP23.4■■□□□ 1.34
PAF1-201ENST00000221265 ATP1B4Q9UN42 357 aaPredicted RBP23.39■■□□□ 1.33
PAF1-201ENST00000221265 CASKIN1Q8WXD9 1431 aa23.38■■□□□ 1.33
PAF1-201ENST00000221265 JPH4Q96JJ6 628 aa23.38■■□□□ 1.33
PAF1-201ENST00000221265 FYCO1Q9BQS8 1478 aa23.37■■□□□ 1.33
PAF1-201ENST00000221265 TIAM1Q13009 1591 aa23.35■■□□□ 1.33
PAF1-201ENST00000221265 LRRIQ1Q96JM4 1722 aa23.34■■□□□ 1.33
PAF1-201ENST00000221265 CFAP43Q8NDM7 1665 aa23.32■■□□□ 1.32
PAF1-201ENST00000221265 MAP3K1Q13233 1512 aa23.3■■□□□ 1.32
PAF1-201ENST00000221265 CARMIL2Q6F5E8 1435 aa23.26■■□□□ 1.31
PAF1-201ENST00000221265 PRG4Q92954 1404 aaPredicted RBP23.25■■□□□ 1.31
PAF1-201ENST00000221265 SHROOM2Q13796 1616 aa23.24■■□□□ 1.31
PAF1-201ENST00000221265 LRRC9Q6ZRR7 1453 aa23.24■■□□□ 1.31
PAF1-201ENST00000221265 CLASP1Q7Z460 1538 aa23.24■■□□□ 1.31
PAF1-201ENST00000221265 HECW1Q76N89 1606 aa23.2■■□□□ 1.31
PAF1-201ENST00000221265 ERCC6L2Q5T890 1561 aa23.18■■□□□ 1.3
PAF1-201ENST00000221265 ARID3CA6NKF2 412 aa23.18■■□□□ 1.3
PAF1-201ENST00000221265 RAPGEF6Q8TEU7 1601 aa23.18■■□□□ 1.3
PAF1-201ENST00000221265 PLB1Q6P1J6 1458 aa23.16■■□□□ 1.3
PAF1-201ENST00000221265 EPRSP07814 1512 aaKnown RBP23.15■■□□□ 1.3
PAF1-201ENST00000221265 CDK13Q14004 1512 aaKnown RBP23.15■■□□□ 1.3
PAF1-201ENST00000221265 NUP153P49790 1475 aaKnown RBP23.14■■□□□ 1.29
PAF1-201ENST00000221265 CCDC18Q5T9S5 1454 aa23.12■■□□□ 1.29
PAF1-201ENST00000221265 MAGI3Q5TCQ9 1506 aa23.11■■□□□ 1.29
PAF1-201ENST00000221265 ZEB1P37275 1124 aaPredicted RBP23.09■■□□□ 1.29
PAF1-201ENST00000221265 MTUS2Q5JR59 1369 aa23.08■■□□□ 1.29
PAF1-201ENST00000221265 PTPRGP23470 1445 aa23.07■■□□□ 1.28
PAF1-201ENST00000221265 ABCA8O94911 1581 aa23.07■■□□□ 1.28
PAF1-201ENST00000221265 PHLDB1Q86UU1 1377 aa23.06■■□□□ 1.28
PAF1-201ENST00000221265 EHBP1L1Q8N3D4 1523 aa23.03■■□□□ 1.28
PAF1-201ENST00000221265 RRBP1Q9P2E9 1410 aaKnown RBP23.02■■□□□ 1.28
PAF1-201ENST00000221265 OSCARQ8IYS5 282 aa23.02■■□□□ 1.28
PAF1-201ENST00000221265 SUPT6HQ7KZ85 1726 aaKnown RBP22.99■■□□□ 1.27
PAF1-201ENST00000221265 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.99■■□□□ 1.27
PAF1-201ENST00000221265 HNRNPUL2Q1KMD3 747 aaKnown RBP22.99■■□□□ 1.27
PAF1-201ENST00000221265 NCOA2Q15596 1464 aa22.97■■□□□ 1.27
PAF1-201ENST00000221265 CCNB3Q8WWL7 1395 aa22.97■■□□□ 1.27
PAF1-201ENST00000221265 ATP10BO94823 1461 aa22.93■■□□□ 1.26
PAF1-201ENST00000221265 UACAQ9BZF9 1416 aa22.93■■□□□ 1.26
PAF1-201ENST00000221265 ARHGEF11O15085 1522 aa22.92■■□□□ 1.26
PAF1-201ENST00000221265 ABCC2Q92887 1545 aa22.87■■□□□ 1.25
PAF1-201ENST00000221265 CDK11AQ9UQ88 783 aaPredicted RBP22.87■■□□□ 1.25
PAF1-201ENST00000221265 FGD6Q6ZV73 1430 aa22.87■■□□□ 1.25
PAF1-201ENST00000221265 MYOM3Q5VTT5 1437 aa22.86■■□□□ 1.25
PAF1-201ENST00000221265 TROQ12816 1431 aaPredicted RBP22.85■■□□□ 1.25
PAF1-201ENST00000221265 FAM50AQ14320 339 aaKnown RBP22.85■■□□□ 1.25
PAF1-201ENST00000221265 ITGAEP38570 1179 aa22.85■■□□□ 1.25
PAF1-201ENST00000221265 KIF14Q15058 1648 aa22.84■■□□□ 1.25
PAF1-201ENST00000221265 ADCY10Q96PN6 1610 aa22.79■■□□□ 1.24
PAF1-201ENST00000221265 PLEKHD1A6NEE1 506 aa22.79■■□□□ 1.24
PAF1-201ENST00000221265 UHRF1BP1LA0JNW5 1464 aa22.78■■□□□ 1.24
PAF1-201ENST00000221265 PTPN23Q9H3S7 1636 aa22.77■■□□□ 1.24
PAF1-201ENST00000221265 ZCCHC11Q5TAX3 1644 aaKnown RBP22.76■■□□□ 1.23
PAF1-201ENST00000221265 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.73■■□□□ 1.23
PAF1-201ENST00000221265 KDM5BQ9UGL1 1544 aa22.73■■□□□ 1.23
PAF1-201ENST00000221265 ABCC10Q5T3U5 1492 aa22.69■■□□□ 1.22
PAF1-201ENST00000221265 MIA2Q96PC5 1412 aa22.69■■□□□ 1.22
PAF1-201ENST00000221265 GPATCH8Q9UKJ3 1502 aaKnown RBP22.69■■□□□ 1.22
PAF1-201ENST00000221265 TCOF1Q13428 1488 aaKnown RBP22.69■■□□□ 1.22
PAF1-201ENST00000221265 CDC42BPAQ5VT25 1732 aa22.68■■□□□ 1.22
PAF1-201ENST00000221265 CCER1Q8TC90 406 aaPredicted RBP22.67■■□□□ 1.22
PAF1-201ENST00000221265 PTPRKQ15262 1439 aa22.67■■□□□ 1.22
PAF1-201ENST00000221265 ITSN2Q9NZM3 1697 aa22.67■■□□□ 1.22
PAF1-201ENST00000221265 ZNF644Q9H582 1327 aaPredicted RBP22.66■■□□□ 1.22
PAF1-201ENST00000221265 TTC37Q6PGP7 1564 aa22.61■■□□□ 1.21
PAF1-201ENST00000221265 CFDP1Q9UEE9 299 aaPredicted RBP22.61■■□□□ 1.21
PAF1-201ENST00000221265 KCNH8Q96L42 1107 aa22.61■■□□□ 1.21
PAF1-201ENST00000221265 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.59■■□□□ 1.21
PAF1-201ENST00000221265 RIMBP3CA6NJZ7 1639 aa22.59■■□□□ 1.21
PAF1-201ENST00000221265 RIMBP3BA6NNM3 1639 aa22.59■■□□□ 1.21
PAF1-201ENST00000221265 RIMBP3Q9UFD9 1639 aa22.59■■□□□ 1.21
PAF1-201ENST00000221265 CDC42BPBQ9Y5S2 1711 aa22.58■■□□□ 1.2
PAF1-201ENST00000221265 ZNF777Q9ULD5 760 aaPredicted RBP22.58■■□□□ 1.2
PAF1-201ENST00000221265 CAMSAP2Q08AD1 1489 aa22.57■■□□□ 1.2
PAF1-201ENST00000221265 RAB3GAP2Q9H2M9 1393 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms