RNA–Protein interactions for RNA: ENST00000218867.3

SGCG-201, Transcript of sarcoglycan gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCG, Length 1,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCG-201ENST00000218867 EHMT2Q96KQ7 1210 aa17.2■□□□□ 0.34
SGCG-201ENST00000218867 KIF21BO75037 1637 aa17.19■□□□□ 0.34
SGCG-201ENST00000218867 CARMIL2Q6F5E8 1435 aa17.19■□□□□ 0.34
SGCG-201ENST00000218867 CEP170Q5SW79 1584 aa17.17■□□□□ 0.34
SGCG-201ENST00000218867 CLASP1Q7Z460 1538 aa17.17■□□□□ 0.34
SGCG-201ENST00000218867 PRG4Q92954 1404 aaPredicted RBP17.14■□□□□ 0.33
SGCG-201ENST00000218867 IQGAP2Q13576 1575 aa17.12■□□□□ 0.33
SGCG-201ENST00000218867 RANGAP1P46060 587 aaPredicted RBP17.1■□□□□ 0.33
SGCG-201ENST00000218867 TNIKQ9UKE5 1360 aa17.08■□□□□ 0.33
SGCG-201ENST00000218867 CYB5RLQ6IPT4 315 aa17.07■□□□□ 0.32
SGCG-201ENST00000218867 ARHGEF11O15085 1522 aa17.06■□□□□ 0.32
SGCG-201ENST00000218867 UGGT2Q9NYU1 1516 aa17.04■□□□□ 0.32
SGCG-201ENST00000218867 PTPRGP23470 1445 aa17.04■□□□□ 0.32
SGCG-201ENST00000218867 NPM1P06748 294 aaKnown RBP eCLIP17.03■□□□□ 0.32
SGCG-201ENST00000218867 SHROOM2Q13796 1616 aa17.02■□□□□ 0.32
SGCG-201ENST00000218867 CTTNBP2Q8WZ74 1663 aa17.02■□□□□ 0.32
SGCG-201ENST00000218867 LOC105371045A0A1W2PR82 267 aa17.02■□□□□ 0.31
SGCG-201ENST00000218867 TTBK1Q5TCY1 1321 aaPredicted RBP17.02■□□□□ 0.31
SGCG-201ENST00000218867 P3H3Q8IVL6 736 aa16.99■□□□□ 0.31
SGCG-201ENST00000218867 RIMBP3CA6NJZ7 1639 aa16.97■□□□□ 0.31
SGCG-201ENST00000218867 RIMBP3BA6NNM3 1639 aa16.97■□□□□ 0.31
SGCG-201ENST00000218867 RIMBP3Q9UFD9 1639 aa16.97■□□□□ 0.31
SGCG-201ENST00000218867 EFCAB5A4FU69 1503 aa16.96■□□□□ 0.31
SGCG-201ENST00000218867 DISP1Q96F81 1524 aa16.94■□□□□ 0.3
SGCG-201ENST00000218867 CLIP1P30622 1438 aa16.93■□□□□ 0.3
SGCG-201ENST00000218867 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
SGCG-201ENST00000218867 KIAA0556O60303 1618 aa16.91■□□□□ 0.3
SGCG-201ENST00000218867 FMN1Q68DA7 1419 aa16.9■□□□□ 0.3
SGCG-201ENST00000218867 UACAQ9BZF9 1416 aa16.89■□□□□ 0.29
SGCG-201ENST00000218867 ERCC6L2Q5T890 1561 aa16.87■□□□□ 0.29
SGCG-201ENST00000218867 CEP162Q5TB80 1403 aa16.87■□□□□ 0.29
SGCG-201ENST00000218867 ATP1B4Q9UN42 357 aaPredicted RBP16.87■□□□□ 0.29
SGCG-201ENST00000218867 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.85■□□□□ 0.29
SGCG-201ENST00000218867 HNRNPUL2Q1KMD3 747 aaKnown RBP16.85■□□□□ 0.29
SGCG-201ENST00000218867 SAMD9Q5K651 1589 aa16.85■□□□□ 0.29
SGCG-201ENST00000218867 FHOD3Q2V2M9 1422 aa16.85■□□□□ 0.29
SGCG-201ENST00000218867 ARHGAP35Q9NRY4 1499 aa16.83■□□□□ 0.29
SGCG-201ENST00000218867 CDK11AQ9UQ88 783 aaPredicted RBP16.83■□□□□ 0.28
SGCG-201ENST00000218867 UHRF1BP1LA0JNW5 1464 aa16.81■□□□□ 0.28
SGCG-201ENST00000218867 APLP2Q06481 763 aa16.81■□□□□ 0.28
SGCG-201ENST00000218867 ABCC2Q92887 1545 aa16.77■□□□□ 0.27
SGCG-201ENST00000218867 PLEKHD1A6NEE1 506 aa16.76■□□□□ 0.27
SGCG-201ENST00000218867 PLB1Q6P1J6 1458 aa16.75■□□□□ 0.27
SGCG-201ENST00000218867 TRHP20396 242 aaPredicted RBP16.72■□□□□ 0.27
SGCG-201ENST00000218867 CASKIN1Q8WXD9 1431 aa16.72■□□□□ 0.27
SGCG-201ENST00000218867 PELP1Q8IZL8 1130 aaKnown RBP16.71■□□□□ 0.27
SGCG-201ENST00000218867 ABCA8O94911 1581 aa16.71■□□□□ 0.27
SGCG-201ENST00000218867 ARID3CA6NKF2 412 aa16.7■□□□□ 0.26
SGCG-201ENST00000218867 KDM5BQ9UGL1 1544 aa16.69■□□□□ 0.26
SGCG-201ENST00000218867 RAPGEF6Q8TEU7 1601 aa16.69■□□□□ 0.26
SGCG-201ENST00000218867 VPS8Q8N3P4 1428 aa16.67■□□□□ 0.26
SGCG-201ENST00000218867 ADCY10Q96PN6 1610 aa16.66■□□□□ 0.26
SGCG-201ENST00000218867 CCDC18Q5T9S5 1454 aa16.66■□□□□ 0.26
SGCG-201ENST00000218867 FYCO1Q9BQS8 1478 aa16.66■□□□□ 0.26
SGCG-201ENST00000218867 HECW1Q76N89 1606 aa16.66■□□□□ 0.26
SGCG-201ENST00000218867 ATP10BO94823 1461 aa16.65■□□□□ 0.26
SGCG-201ENST00000218867 KCNH8Q96L42 1107 aa16.65■□□□□ 0.26
SGCG-201ENST00000218867 ASXL2Q76L83 1435 aa16.64■□□□□ 0.25
SGCG-201ENST00000218867 NUP153P49790 1475 aaKnown RBP16.64■□□□□ 0.25
SGCG-201ENST00000218867 FAM69CQ0P6D2 419 aa16.63■□□□□ 0.25
SGCG-201ENST00000218867 MAPKBP1O60336 1514 aa16.63■□□□□ 0.25
SGCG-201ENST00000218867 EPRSP07814 1512 aaKnown RBP16.61■□□□□ 0.25
SGCG-201ENST00000218867 WDR7Q9Y4E6 1490 aa16.59■□□□□ 0.25
SGCG-201ENST00000218867 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
SGCG-201ENST00000218867 ZCCHC11Q5TAX3 1644 aaKnown RBP16.57■□□□□ 0.24
SGCG-201ENST00000218867 ABCC10Q5T3U5 1492 aa16.56■□□□□ 0.24
SGCG-201ENST00000218867 PCF11O94913 1555 aaKnown RBP16.54■□□□□ 0.24
SGCG-201ENST00000218867 TROQ12816 1431 aaPredicted RBP16.53■□□□□ 0.24
SGCG-201ENST00000218867 MAP3K1Q13233 1512 aa16.5■□□□□ 0.23
SGCG-201ENST00000218867 CDK13Q14004 1512 aaKnown RBP16.5■□□□□ 0.23
SGCG-201ENST00000218867 CD109Q6YHK3 1445 aa16.48■□□□□ 0.23
SGCG-201ENST00000218867 GLI2P10070 1586 aa16.46■□□□□ 0.23
SGCG-201ENST00000218867 MYT1Q01538 1121 aa16.45■□□□□ 0.22
SGCG-201ENST00000218867 EFCAB2Q5VUJ9 269 aa16.45■□□□□ 0.22
SGCG-201ENST00000218867 PHLDB1Q86UU1 1377 aa16.45■□□□□ 0.22
SGCG-201ENST00000218867 TEX14Q8IWB6 1497 aa16.44■□□□□ 0.22
SGCG-201ENST00000218867 CCNB3Q8WWL7 1395 aa16.44■□□□□ 0.22
SGCG-201ENST00000218867 TIAM1Q13009 1591 aa16.42■□□□□ 0.22
SGCG-201ENST00000218867 LRRC9Q6ZRR7 1453 aa16.41■□□□□ 0.22
SGCG-201ENST00000218867 EHBP1L1Q8N3D4 1523 aa16.41■□□□□ 0.22
SGCG-201ENST00000218867 DIP2BQ9P265 1576 aa16.41■□□□□ 0.22
SGCG-201ENST00000218867 KIF14Q15058 1648 aa16.41■□□□□ 0.22
SGCG-201ENST00000218867 CFDP1Q9UEE9 299 aaPredicted RBP16.41■□□□□ 0.22
SGCG-201ENST00000218867 KANK4Q5T7N3 995 aaPredicted RBP16.38■□□□□ 0.21
SGCG-201ENST00000218867 PLCH2O75038 1416 aa16.38■□□□□ 0.21
SGCG-201ENST00000218867 MAGI3Q5TCQ9 1506 aa16.37■□□□□ 0.21
SGCG-201ENST00000218867 ZNF777Q9ULD5 760 aaPredicted RBP16.35■□□□□ 0.21
SGCG-201ENST00000218867 CFAP43Q8NDM7 1665 aa16.35■□□□□ 0.21
SGCG-201ENST00000218867 ABCA9Q8IUA7 1624 aa16.34■□□□□ 0.21
SGCG-201ENST00000218867 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.34■□□□□ 0.21
SGCG-201ENST00000218867 RSPH4AQ5TD94 716 aa16.34■□□□□ 0.21
SGCG-201ENST00000218867 NCOA2Q15596 1464 aa16.32■□□□□ 0.2
SGCG-201ENST00000218867 NEO1Q92859 1461 aa16.32■□□□□ 0.2
SGCG-201ENST00000218867 SUPT6HQ7KZ85 1726 aaKnown RBP16.31■□□□□ 0.2
SGCG-201ENST00000218867 ARAP3Q8WWN8 1544 aa16.31■□□□□ 0.2
SGCG-201ENST00000218867 FANCAO15360 1455 aa16.3■□□□□ 0.2
SGCG-201ENST00000218867 MAP3K4Q9Y6R4 1608 aa16.3■□□□□ 0.2
SGCG-201ENST00000218867 ARHGAP5Q13017 1502 aa16.3■□□□□ 0.2
SGCG-201ENST00000218867 LRRIQ1Q96JM4 1722 aa16.29■□□□□ 0.2
SGCG-201ENST00000218867 AKNAQ7Z591 1439 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms