RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 ARHGAP35Q9NRY4 1499 aa26.21■■□□□ 1.79
CHGA-201ENST00000216492 SNAPC4Q5SXM2 1469 aa26.2■■□□□ 1.78
CHGA-201ENST00000216492 ADAMTS12P58397 1594 aa26.19■■□□□ 1.78
CHGA-201ENST00000216492 ARAP1Q96P48 1450 aa26.17■■□□□ 1.78
CHGA-201ENST00000216492 CHMP7Q8WUX9 453 aaPredicted RBP26.14■■□□□ 1.77
CHGA-201ENST00000216492 MAGI1Q96QZ7 1491 aaPredicted RBP26.14■■□□□ 1.77
CHGA-201ENST00000216492 P3H3Q8IVL6 736 aa26.11■■□□□ 1.77
CHGA-201ENST00000216492 APLP2Q06481 763 aa26.11■■□□□ 1.77
CHGA-201ENST00000216492 FBLN2P98095 1184 aa26.1■■□□□ 1.77
CHGA-201ENST00000216492 CTTNBP2Q8WZ74 1663 aa26.08■■□□□ 1.77
CHGA-201ENST00000216492 SYNJ2O15056 1496 aa26.06■■□□□ 1.76
CHGA-201ENST00000216492 GRIN2AQ12879 1464 aa26.05■■□□□ 1.76
CHGA-201ENST00000216492 TTBK1Q5TCY1 1321 aaPredicted RBP26.03■■□□□ 1.76
CHGA-201ENST00000216492 EFCAB5A4FU69 1503 aa26■■□□□ 1.75
CHGA-201ENST00000216492 FHOD3Q2V2M9 1422 aa25.97■■□□□ 1.75
CHGA-201ENST00000216492 KIAA0586Q9BVV6 1533 aa25.96■■□□□ 1.75
CHGA-201ENST00000216492 IQGAP2Q13576 1575 aa25.94■■□□□ 1.74
CHGA-201ENST00000216492 SAMD9Q5K651 1589 aa25.88■■□□□ 1.73
CHGA-201ENST00000216492 ATP1B4Q9UN42 357 aaPredicted RBP25.86■■□□□ 1.73
CHGA-201ENST00000216492 NUP160Q12769 1436 aa25.86■■□□□ 1.73
CHGA-201ENST00000216492 FMN1Q68DA7 1419 aa25.86■■□□□ 1.73
CHGA-201ENST00000216492 CEP170Q5SW79 1584 aa25.84■■□□□ 1.73
CHGA-201ENST00000216492 KANK4Q5T7N3 995 aaPredicted RBP25.84■■□□□ 1.73
CHGA-201ENST00000216492 UGGT2Q9NYU1 1516 aa25.83■■□□□ 1.73
CHGA-201ENST00000216492 JPH4Q96JJ6 628 aa25.81■■□□□ 1.72
CHGA-201ENST00000216492 CASKIN1Q8WXD9 1431 aa25.78■■□□□ 1.72
CHGA-201ENST00000216492 FYCO1Q9BQS8 1478 aa25.74■■□□□ 1.71
CHGA-201ENST00000216492 MAP3K1Q13233 1512 aa25.73■■□□□ 1.71
CHGA-201ENST00000216492 DISP1Q96F81 1524 aa25.73■■□□□ 1.71
CHGA-201ENST00000216492 PCF11O94913 1555 aaKnown RBP25.73■■□□□ 1.71
CHGA-201ENST00000216492 TIAM1Q13009 1591 aa25.68■■□□□ 1.7
CHGA-201ENST00000216492 CARMIL2Q6F5E8 1435 aa25.66■■□□□ 1.7
CHGA-201ENST00000216492 KIAA0556O60303 1618 aa25.66■■□□□ 1.7
CHGA-201ENST00000216492 CHD1O14646 1710 aa25.65■■□□□ 1.7
CHGA-201ENST00000216492 LRRC9Q6ZRR7 1453 aa25.63■■□□□ 1.69
CHGA-201ENST00000216492 CCER1Q8TC90 406 aaPredicted RBP25.62■■□□□ 1.69
CHGA-201ENST00000216492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.58■■□□□ 1.69
CHGA-201ENST00000216492 PRG4Q92954 1404 aaPredicted RBP25.56■■□□□ 1.68
CHGA-201ENST00000216492 CFAP43Q8NDM7 1665 aa25.52■■□□□ 1.68
CHGA-201ENST00000216492 MTUS2Q5JR59 1369 aa25.51■■□□□ 1.67
CHGA-201ENST00000216492 ARID3CA6NKF2 412 aa25.49■■□□□ 1.67
CHGA-201ENST00000216492 CCDC18Q5T9S5 1454 aa25.49■■□□□ 1.67
CHGA-201ENST00000216492 HECW1Q76N89 1606 aa25.48■■□□□ 1.67
CHGA-201ENST00000216492 EPRSP07814 1512 aaKnown RBP25.48■■□□□ 1.67
CHGA-201ENST00000216492 HNRNPUL2Q1KMD3 747 aaKnown RBP25.45■■□□□ 1.66
CHGA-201ENST00000216492 PLB1Q6P1J6 1458 aa25.44■■□□□ 1.66
CHGA-201ENST00000216492 PTPRGP23470 1445 aa25.44■■□□□ 1.66
CHGA-201ENST00000216492 RRBP1Q9P2E9 1410 aaKnown RBP25.44■■□□□ 1.66
CHGA-201ENST00000216492 LRRIQ1Q96JM4 1722 aa25.43■■□□□ 1.66
CHGA-201ENST00000216492 PHLDB1Q86UU1 1377 aa25.43■■□□□ 1.66
CHGA-201ENST00000216492 NUP153P49790 1475 aaKnown RBP25.42■■□□□ 1.66
CHGA-201ENST00000216492 SHROOM2Q13796 1616 aa25.41■■□□□ 1.66
CHGA-201ENST00000216492 RAPGEF6Q8TEU7 1601 aa25.41■■□□□ 1.66
CHGA-201ENST00000216492 CCNB3Q8WWL7 1395 aa25.41■■□□□ 1.66
CHGA-201ENST00000216492 CLASP1Q7Z460 1538 aa25.41■■□□□ 1.66
CHGA-201ENST00000216492 CDK13Q14004 1512 aaKnown RBP25.39■■□□□ 1.65
CHGA-201ENST00000216492 OSCARQ8IYS5 282 aa25.38■■□□□ 1.65
CHGA-201ENST00000216492 CDK11AQ9UQ88 783 aaPredicted RBP25.37■■□□□ 1.65
CHGA-201ENST00000216492 MAGI3Q5TCQ9 1506 aa25.33■■□□□ 1.65
CHGA-201ENST00000216492 EHBP1L1Q8N3D4 1523 aa25.33■■□□□ 1.64
CHGA-201ENST00000216492 ABCA8O94911 1581 aa25.31■■□□□ 1.64
CHGA-201ENST00000216492 ERCC6L2Q5T890 1561 aa25.31■■□□□ 1.64
CHGA-201ENST00000216492 NCOA2Q15596 1464 aa25.3■■□□□ 1.64
CHGA-201ENST00000216492 FAM50AQ14320 339 aaKnown RBP25.28■■□□□ 1.64
CHGA-201ENST00000216492 ITGAEP38570 1179 aa25.27■■□□□ 1.64
CHGA-201ENST00000216492 UACAQ9BZF9 1416 aa25.26■■□□□ 1.63
CHGA-201ENST00000216492 SUPT6HQ7KZ85 1726 aaKnown RBP25.25■■□□□ 1.63
CHGA-201ENST00000216492 PLEKHD1A6NEE1 506 aa25.24■■□□□ 1.63
CHGA-201ENST00000216492 ATP10BO94823 1461 aa25.23■■□□□ 1.63
CHGA-201ENST00000216492 MYOM3Q5VTT5 1437 aa25.21■■□□□ 1.63
CHGA-201ENST00000216492 FGD6Q6ZV73 1430 aa25.21■■□□□ 1.63
CHGA-201ENST00000216492 ARHGEF11O15085 1522 aa25.21■■□□□ 1.63
CHGA-201ENST00000216492 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.2■■□□□ 1.62
CHGA-201ENST00000216492 TROQ12816 1431 aaPredicted RBP25.19■■□□□ 1.62
CHGA-201ENST00000216492 ABCC2Q92887 1545 aa25.1■■□□□ 1.61
CHGA-201ENST00000216492 MIA2Q96PC5 1412 aa25.08■■□□□ 1.61
CHGA-201ENST00000216492 UHRF1BP1LA0JNW5 1464 aa25.05■■□□□ 1.6
CHGA-201ENST00000216492 PTPN23Q9H3S7 1636 aa25.02■■□□□ 1.6
CHGA-201ENST00000216492 CFDP1Q9UEE9 299 aaPredicted RBP25.01■■□□□ 1.59
CHGA-201ENST00000216492 DIEXFQ68CQ4 756 aaKnown RBP25.01■■□□□ 1.59
CHGA-201ENST00000216492 TCOF1Q13428 1488 aaKnown RBP25.01■■□□□ 1.59
CHGA-201ENST00000216492 KIF14Q15058 1648 aa24.98■■□□□ 1.59
CHGA-201ENST00000216492 GPATCH8Q9UKJ3 1502 aaKnown RBP24.98■■□□□ 1.59
CHGA-201ENST00000216492 ADCY10Q96PN6 1610 aa24.97■■□□□ 1.59
CHGA-201ENST00000216492 KDM5BQ9UGL1 1544 aa24.97■■□□□ 1.59
CHGA-201ENST00000216492 ZNF644Q9H582 1327 aaPredicted RBP24.96■■□□□ 1.59
CHGA-201ENST00000216492 PTPRKQ15262 1439 aa24.95■■□□□ 1.59
CHGA-201ENST00000216492 SETD5Q9C0A6 1442 aa24.95■■□□□ 1.59
CHGA-201ENST00000216492 KCNH8Q96L42 1107 aa24.94■■□□□ 1.58
CHGA-201ENST00000216492 ABCC10Q5T3U5 1492 aa24.94■■□□□ 1.58
CHGA-201ENST00000216492 ZNF777Q9ULD5 760 aaPredicted RBP24.93■■□□□ 1.58
CHGA-201ENST00000216492 RAB3GAP2Q9H2M9 1393 aa24.93■■□□□ 1.58
CHGA-201ENST00000216492 ZNF316A6NFI3 1004 aaPredicted RBP24.92■■□□□ 1.58
CHGA-201ENST00000216492 CHIC2Q9UKJ5 165 aa24.89■■□□□ 1.58
CHGA-201ENST00000216492 ZCCHC11Q5TAX3 1644 aaKnown RBP24.88■■□□□ 1.57
CHGA-201ENST00000216492 PELP1Q8IZL8 1130 aaKnown RBP24.87■■□□□ 1.57
CHGA-201ENST00000216492 CLSPNQ9HAW4 1339 aa24.86■■□□□ 1.57
CHGA-201ENST00000216492 NPM1P06748 294 aaKnown RBP eCLIP24.85■■□□□ 1.57
CHGA-201ENST00000216492 ITSN2Q9NZM3 1697 aa24.85■■□□□ 1.57
CHGA-201ENST00000216492 DHX57Q6P158 1386 aaKnown RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms