RNA–Protein interactions for RNA: ENST00000216083.6

CBX6-201, Transcript of chromobox 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CBX6, Length 3,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-201ENST00000216083 GRIN2BQ13224 1484 aa22.63■■□□□ 1.21
CBX6-201ENST00000216083 EIF4G3O43432 1585 aaKnown RBP22.61■■□□□ 1.21
CBX6-201ENST00000216083 FHAD1B1AJZ9 1412 aa22.57■■□□□ 1.2
CBX6-201ENST00000216083 SNAPC4Q5SXM2 1469 aa22.57■■□□□ 1.2
CBX6-201ENST00000216083 APLP2Q06481 763 aa22.56■■□□□ 1.2
CBX6-201ENST00000216083 ADAMTS12P58397 1594 aa22.56■■□□□ 1.2
CBX6-201ENST00000216083 PELP1Q8IZL8 1130 aaKnown RBP22.54■■□□□ 1.2
CBX6-201ENST00000216083 FBLN2P98095 1184 aa22.54■■□□□ 1.2
CBX6-201ENST00000216083 CTTNBP2Q8WZ74 1663 aa22.53■■□□□ 1.2
CBX6-201ENST00000216083 FHOD3Q2V2M9 1422 aa22.52■■□□□ 1.2
CBX6-201ENST00000216083 SCAF1Q9H7N4 1312 aaKnown RBP22.5■■□□□ 1.19
CBX6-201ENST00000216083 ATP1B4Q9UN42 357 aaPredicted RBP22.48■■□□□ 1.19
CBX6-201ENST00000216083 KANK4Q5T7N3 995 aaPredicted RBP22.46■■□□□ 1.19
CBX6-201ENST00000216083 CHMP7Q8WUX9 453 aaPredicted RBP22.45■■□□□ 1.18
CBX6-201ENST00000216083 GRIN2AQ12879 1464 aa22.39■■□□□ 1.18
CBX6-201ENST00000216083 MAGI1Q96QZ7 1491 aaPredicted RBP22.38■■□□□ 1.17
CBX6-201ENST00000216083 EFCAB5A4FU69 1503 aa22.36■■□□□ 1.17
CBX6-201ENST00000216083 SYNJ2O15056 1496 aa22.34■■□□□ 1.17
CBX6-201ENST00000216083 IQGAP2Q13576 1575 aa22.34■■□□□ 1.17
CBX6-201ENST00000216083 PCF11O94913 1555 aaKnown RBP22.33■■□□□ 1.17
CBX6-201ENST00000216083 SAMD9Q5K651 1589 aa22.31■■□□□ 1.16
CBX6-201ENST00000216083 CEP170Q5SW79 1584 aa22.27■■□□□ 1.16
CBX6-201ENST00000216083 KIAA0586Q9BVV6 1533 aa22.27■■□□□ 1.16
CBX6-201ENST00000216083 ARID3CA6NKF2 412 aa22.24■■□□□ 1.15
CBX6-201ENST00000216083 FMN1Q68DA7 1419 aa22.24■■□□□ 1.15
CBX6-201ENST00000216083 HNRNPUL2Q1KMD3 747 aaKnown RBP22.24■■□□□ 1.15
CBX6-201ENST00000216083 TIAM1Q13009 1591 aa22.23■■□□□ 1.15
CBX6-201ENST00000216083 CASKIN1Q8WXD9 1431 aa22.22■■□□□ 1.15
CBX6-201ENST00000216083 FYCO1Q9BQS8 1478 aa22.18■■□□□ 1.14
CBX6-201ENST00000216083 UGGT2Q9NYU1 1516 aa22.18■■□□□ 1.14
CBX6-201ENST00000216083 NUP160Q12769 1436 aa22.17■■□□□ 1.14
CBX6-201ENST00000216083 DISP1Q96F81 1524 aa22.17■■□□□ 1.14
CBX6-201ENST00000216083 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.17■■□□□ 1.14
CBX6-201ENST00000216083 JPH4Q96JJ6 628 aa22.17■■□□□ 1.14
CBX6-201ENST00000216083 LRRC9Q6ZRR7 1453 aa22.15■■□□□ 1.14
CBX6-201ENST00000216083 CHD1O14646 1710 aa22.12■■□□□ 1.13
CBX6-201ENST00000216083 KIAA0556O60303 1618 aa22.12■■□□□ 1.13
CBX6-201ENST00000216083 LRRIQ1Q96JM4 1722 aa22.11■■□□□ 1.13
CBX6-201ENST00000216083 MAP3K1Q13233 1512 aa22.1■■□□□ 1.13
CBX6-201ENST00000216083 CFAP43Q8NDM7 1665 aa22.1■■□□□ 1.13
CBX6-201ENST00000216083 ITGAEP38570 1179 aa22.07■■□□□ 1.12
CBX6-201ENST00000216083 PHLDB1Q86UU1 1377 aa22.06■■□□□ 1.12
CBX6-201ENST00000216083 MTUS2Q5JR59 1369 aa22.04■■□□□ 1.12
CBX6-201ENST00000216083 CDK13Q14004 1512 aaKnown RBP22.02■■□□□ 1.12
CBX6-201ENST00000216083 CCER1Q8TC90 406 aaPredicted RBP22.01■■□□□ 1.11
CBX6-201ENST00000216083 CCNB3Q8WWL7 1395 aa22■■□□□ 1.11
CBX6-201ENST00000216083 RRBP1Q9P2E9 1410 aaKnown RBP22■■□□□ 1.11
CBX6-201ENST00000216083 CARMIL2Q6F5E8 1435 aa21.99■■□□□ 1.11
CBX6-201ENST00000216083 PLB1Q6P1J6 1458 aa21.99■■□□□ 1.11
CBX6-201ENST00000216083 PRG4Q92954 1404 aaPredicted RBP21.98■■□□□ 1.11
CBX6-201ENST00000216083 EPRSP07814 1512 aaKnown RBP21.98■■□□□ 1.11
CBX6-201ENST00000216083 MAGI3Q5TCQ9 1506 aa21.97■■□□□ 1.11
CBX6-201ENST00000216083 HECW1Q76N89 1606 aa21.97■■□□□ 1.11
CBX6-201ENST00000216083 FAM50AQ14320 339 aaKnown RBP21.97■■□□□ 1.11
CBX6-201ENST00000216083 NUP153P49790 1475 aaKnown RBP21.93■■□□□ 1.1
CBX6-201ENST00000216083 RAPGEF6Q8TEU7 1601 aa21.91■■□□□ 1.1
CBX6-201ENST00000216083 CCDC18Q5T9S5 1454 aa21.91■■□□□ 1.1
CBX6-201ENST00000216083 ERCC6L2Q5T890 1561 aa21.89■■□□□ 1.1
CBX6-201ENST00000216083 NCOA2Q15596 1464 aa21.89■■□□□ 1.09
CBX6-201ENST00000216083 NEUROD1Q13562 356 aa21.88■■□□□ 1.09
CBX6-201ENST00000216083 EHBP1L1Q8N3D4 1523 aa21.85■■□□□ 1.09
CBX6-201ENST00000216083 PTPRGP23470 1445 aa21.85■■□□□ 1.09
CBX6-201ENST00000216083 ZEB1P37275 1124 aaPredicted RBP21.81■■□□□ 1.08
CBX6-201ENST00000216083 SUPT6HQ7KZ85 1726 aaKnown RBP21.81■■□□□ 1.08
CBX6-201ENST00000216083 FGD6Q6ZV73 1430 aa21.81■■□□□ 1.08
CBX6-201ENST00000216083 SHROOM2Q13796 1616 aa21.79■■□□□ 1.08
CBX6-201ENST00000216083 GTF3C3Q9Y5Q9 886 aa21.79■■□□□ 1.08
CBX6-201ENST00000216083 CLASP1Q7Z460 1538 aa21.78■■□□□ 1.08
CBX6-201ENST00000216083 MYOM3Q5VTT5 1437 aa21.77■■□□□ 1.08
CBX6-201ENST00000216083 ABCA8O94911 1581 aa21.77■■□□□ 1.08
CBX6-201ENST00000216083 ACIN1Q9UKV3 1341 aaKnown RBP21.77■■□□□ 1.08
CBX6-201ENST00000216083 CDK11AQ9UQ88 783 aaPredicted RBP21.75■■□□□ 1.07
CBX6-201ENST00000216083 ATP10BO94823 1461 aa21.73■■□□□ 1.07
CBX6-201ENST00000216083 ARHGEF11O15085 1522 aa21.73■■□□□ 1.07
CBX6-201ENST00000216083 TROQ12816 1431 aaPredicted RBP21.68■■□□□ 1.06
CBX6-201ENST00000216083 PLEKHD1A6NEE1 506 aa21.68■■□□□ 1.06
CBX6-201ENST00000216083 UACAQ9BZF9 1416 aa21.68■■□□□ 1.06
CBX6-201ENST00000216083 PTPRKQ15262 1439 aa21.67■■□□□ 1.06
CBX6-201ENST00000216083 ZNF644Q9H582 1327 aaPredicted RBP21.67■■□□□ 1.06
CBX6-201ENST00000216083 OSCARQ8IYS5 282 aa21.67■■□□□ 1.06
CBX6-201ENST00000216083 KIF14Q15058 1648 aa21.66■■□□□ 1.06
CBX6-201ENST00000216083 PTPN23Q9H3S7 1636 aa21.66■■□□□ 1.06
CBX6-201ENST00000216083 RAB3GAP2Q9H2M9 1393 aa21.66■■□□□ 1.06
CBX6-201ENST00000216083 CHIC2Q9UKJ5 165 aa21.65■■□□□ 1.06
CBX6-201ENST00000216083 ZNF777Q9ULD5 760 aaPredicted RBP21.62■■□□□ 1.05
CBX6-201ENST00000216083 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.62■■□□□ 1.05
CBX6-201ENST00000216083 DHX57Q6P158 1386 aaKnown RBP21.6■■□□□ 1.05
CBX6-201ENST00000216083 SETD5Q9C0A6 1442 aa21.6■■□□□ 1.05
CBX6-201ENST00000216083 CFDP1Q9UEE9 299 aaPredicted RBP21.58■■□□□ 1.04
CBX6-201ENST00000216083 RRP7BPQ9NSQ0 103 aa21.57■■□□□ 1.04
CBX6-201ENST00000216083 ABCC2Q92887 1545 aa21.56■■□□□ 1.04
CBX6-201ENST00000216083 KCNH8Q96L42 1107 aa21.55■■□□□ 1.04
CBX6-201ENST00000216083 MIA2Q96PC5 1412 aa21.55■■□□□ 1.04
CBX6-201ENST00000216083 GPATCH8Q9UKJ3 1502 aaKnown RBP21.54■■□□□ 1.04
CBX6-201ENST00000216083 TCOF1Q13428 1488 aaKnown RBP21.54■■□□□ 1.04
CBX6-201ENST00000216083 MYT1Q01538 1121 aa21.54■■□□□ 1.04
CBX6-201ENST00000216083 ADCY10Q96PN6 1610 aa21.5■■□□□ 1.03
CBX6-201ENST00000216083 YTHDC1Q96MU7 727 aaKnown RBP21.5■■□□□ 1.03
CBX6-201ENST00000216083 ABCC10Q5T3U5 1492 aa21.48■■□□□ 1.03
CBX6-201ENST00000216083 CAMSAP2Q08AD1 1489 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms