RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 CEP170Q5SW79 1584 aa16.01■□□□□ 0.15
RTCB-201ENST00000216038 CTTNBP2Q8WZ74 1663 aa16■□□□□ 0.15
RTCB-201ENST00000216038 NUP160Q12769 1436 aa15.96■□□□□ 0.15
RTCB-201ENST00000216038 CEP162Q5TB80 1403 aa15.95■□□□□ 0.14
RTCB-201ENST00000216038 IQGAP2Q13576 1575 aa15.93■□□□□ 0.14
RTCB-201ENST00000216038 KIAA0586Q9BVV6 1533 aa15.93■□□□□ 0.14
RTCB-201ENST00000216038 P3H3Q8IVL6 736 aa15.9■□□□□ 0.14
RTCB-201ENST00000216038 OSCARQ8IYS5 282 aa15.9■□□□□ 0.14
RTCB-201ENST00000216038 CLIP1P30622 1438 aa15.9■□□□□ 0.14
RTCB-201ENST00000216038 JPH4Q96JJ6 628 aa15.87■□□□□ 0.13
RTCB-201ENST00000216038 CLASP1Q7Z460 1538 aa15.86■□□□□ 0.13
RTCB-201ENST00000216038 ARHGAP35Q9NRY4 1499 aa15.84■□□□□ 0.13
RTCB-201ENST00000216038 TTBK1Q5TCY1 1321 aaPredicted RBP15.83■□□□□ 0.12
RTCB-201ENST00000216038 UGGT2Q9NYU1 1516 aa15.82■□□□□ 0.12
RTCB-201ENST00000216038 FHOD3Q2V2M9 1422 aa15.81■□□□□ 0.12
RTCB-201ENST00000216038 PRG4Q92954 1404 aaPredicted RBP15.8■□□□□ 0.12
RTCB-201ENST00000216038 ARAP1Q96P48 1450 aa15.8■□□□□ 0.12
RTCB-201ENST00000216038 DISP1Q96F81 1524 aa15.8■□□□□ 0.12
RTCB-201ENST00000216038 SAMD9Q5K651 1589 aa15.8■□□□□ 0.12
RTCB-201ENST00000216038 SHROOM2Q13796 1616 aa15.78■□□□□ 0.12
RTCB-201ENST00000216038 EFCAB5A4FU69 1503 aa15.78■□□□□ 0.12
RTCB-201ENST00000216038 ERCC6L2Q5T890 1561 aa15.78■□□□□ 0.12
RTCB-201ENST00000216038 KIAA0556O60303 1618 aa15.77■□□□□ 0.11
RTCB-201ENST00000216038 CARMIL2Q6F5E8 1435 aa15.75■□□□□ 0.11
RTCB-201ENST00000216038 ATP1B4Q9UN42 357 aaPredicted RBP15.69■□□□□ 0.1
RTCB-201ENST00000216038 VPS8Q8N3P4 1428 aa15.69■□□□□ 0.1
RTCB-201ENST00000216038 PTPRGP23470 1445 aa15.66■□□□□ 0.1
RTCB-201ENST00000216038 FMN1Q68DA7 1419 aa15.66■□□□□ 0.1
RTCB-201ENST00000216038 PCF11O94913 1555 aaKnown RBP15.64■□□□□ 0.09
RTCB-201ENST00000216038 ARID3CA6NKF2 412 aa15.64■□□□□ 0.09
RTCB-201ENST00000216038 ARHGEF11O15085 1522 aa15.64■□□□□ 0.09
RTCB-201ENST00000216038 PLB1Q6P1J6 1458 aa15.63■□□□□ 0.09
RTCB-201ENST00000216038 PPARGC1BQ86YN6 1023 aaKnown RBP15.61■□□□□ 0.09
RTCB-201ENST00000216038 RIMBP3CA6NJZ7 1639 aa15.6■□□□□ 0.09
RTCB-201ENST00000216038 RIMBP3BA6NNM3 1639 aa15.6■□□□□ 0.09
RTCB-201ENST00000216038 RIMBP3Q9UFD9 1639 aa15.6■□□□□ 0.09
RTCB-201ENST00000216038 CASKIN1Q8WXD9 1431 aa15.59■□□□□ 0.09
RTCB-201ENST00000216038 RAPGEF6Q8TEU7 1601 aa15.58■□□□□ 0.08
RTCB-201ENST00000216038 LRRIQ1Q96JM4 1722 aa15.57■□□□□ 0.08
RTCB-201ENST00000216038 FYCO1Q9BQS8 1478 aa15.57■□□□□ 0.08
RTCB-201ENST00000216038 APLP2Q06481 763 aa15.55■□□□□ 0.08
RTCB-201ENST00000216038 CYB5RLQ6IPT4 315 aa15.55■□□□□ 0.08
RTCB-201ENST00000216038 ABCA8O94911 1581 aa15.55■□□□□ 0.08
RTCB-201ENST00000216038 UACAQ9BZF9 1416 aa15.54■□□□□ 0.08
RTCB-201ENST00000216038 NUP153P49790 1475 aaKnown RBP15.54■□□□□ 0.08
RTCB-201ENST00000216038 HECW1Q76N89 1606 aa15.54■□□□□ 0.08
RTCB-201ENST00000216038 PELP1Q8IZL8 1130 aaKnown RBP15.53■□□□□ 0.08
RTCB-201ENST00000216038 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.53■□□□□ 0.08
RTCB-201ENST00000216038 HNRNPUL2Q1KMD3 747 aaKnown RBP15.53■□□□□ 0.08
RTCB-201ENST00000216038 CDK13Q14004 1512 aaKnown RBP15.52■□□□□ 0.08
RTCB-201ENST00000216038 EPRSP07814 1512 aaKnown RBP15.5■□□□□ 0.07
RTCB-201ENST00000216038 KANK4Q5T7N3 995 aaPredicted RBP15.5■□□□□ 0.07
RTCB-201ENST00000216038 ABCC2Q92887 1545 aa15.5■□□□□ 0.07
RTCB-201ENST00000216038 ADCY10Q96PN6 1610 aa15.5■□□□□ 0.07
RTCB-201ENST00000216038 TIAM1Q13009 1591 aa15.48■□□□□ 0.07
RTCB-201ENST00000216038 CFAP43Q8NDM7 1665 aa15.47■□□□□ 0.07
RTCB-201ENST00000216038 DNAJC5Q9H3Z4 198 aa15.46■□□□□ 0.07
RTCB-201ENST00000216038 ATP10BO94823 1461 aa15.46■□□□□ 0.07
RTCB-201ENST00000216038 CCDC18Q5T9S5 1454 aa15.46■□□□□ 0.06
RTCB-201ENST00000216038 UHRF1BP1LA0JNW5 1464 aa15.45■□□□□ 0.06
RTCB-201ENST00000216038 ZCCHC11Q5TAX3 1644 aaKnown RBP15.43■□□□□ 0.06
RTCB-201ENST00000216038 MAGI3Q5TCQ9 1506 aa15.42■□□□□ 0.06
RTCB-201ENST00000216038 MAP3K1Q13233 1512 aa15.42■□□□□ 0.06
RTCB-201ENST00000216038 MTUS2Q5JR59 1369 aa15.41■□□□□ 0.06
RTCB-201ENST00000216038 LRRC9Q6ZRR7 1453 aa15.41■□□□□ 0.06
RTCB-201ENST00000216038 KDM5BQ9UGL1 1544 aa15.41■□□□□ 0.06
RTCB-201ENST00000216038 NPM1P06748 294 aaKnown RBP eCLIP15.39■□□□□ 0.05
RTCB-201ENST00000216038 PLEKHD1A6NEE1 506 aa15.38■□□□□ 0.05
RTCB-201ENST00000216038 HRCP23327 699 aa15.38■□□□□ 0.05
RTCB-201ENST00000216038 CDK11AQ9UQ88 783 aaPredicted RBP15.38■□□□□ 0.05
RTCB-201ENST00000216038 KCNH8Q96L42 1107 aa15.36■□□□□ 0.05
RTCB-201ENST00000216038 EHBP1L1Q8N3D4 1523 aa15.34■□□□□ 0.05
RTCB-201ENST00000216038 TROQ12816 1431 aaPredicted RBP15.33■□□□□ 0.05
RTCB-201ENST00000216038 KIF14Q15058 1648 aa15.32■□□□□ 0.04
RTCB-201ENST00000216038 ASXL2Q76L83 1435 aa15.32■□□□□ 0.04
RTCB-201ENST00000216038 SUPT6HQ7KZ85 1726 aaKnown RBP15.31■□□□□ 0.04
RTCB-201ENST00000216038 NCOA2Q15596 1464 aa15.3■□□□□ 0.04
RTCB-201ENST00000216038 WDR7Q9Y4E6 1490 aa15.29■□□□□ 0.04
RTCB-201ENST00000216038 PHLDB1Q86UU1 1377 aa15.28■□□□□ 0.04
RTCB-201ENST00000216038 TTC37Q6PGP7 1564 aa15.24■□□□□ 0.03
RTCB-201ENST00000216038 MAPKBP1O60336 1514 aa15.24■□□□□ 0.03
RTCB-201ENST00000216038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.23■□□□□ 0.03
RTCB-201ENST00000216038 CCNB3Q8WWL7 1395 aa15.23■□□□□ 0.03
RTCB-201ENST00000216038 ABCC10Q5T3U5 1492 aa15.22■□□□□ 0.03
RTCB-201ENST00000216038 MYOM3Q5VTT5 1437 aa15.2■□□□□ 0.02
RTCB-201ENST00000216038 CDC42BPAQ5VT25 1732 aa15.2■□□□□ 0.02
RTCB-201ENST00000216038 GPATCH8Q9UKJ3 1502 aaKnown RBP15.19■□□□□ 0.02
RTCB-201ENST00000216038 TRIM26Q12899 539 aaPredicted RBP15.19■□□□□ 0.02
RTCB-201ENST00000216038 FAM50AQ14320 339 aaKnown RBP15.18■□□□□ 0.02
RTCB-201ENST00000216038 ZNF777Q9ULD5 760 aaPredicted RBP15.18■□□□□ 0.02
RTCB-201ENST00000216038 FGD6Q6ZV73 1430 aa15.18■□□□□ 0.02
RTCB-201ENST00000216038 FAM69CQ0P6D2 419 aa15.17■□□□□ 0.02
RTCB-201ENST00000216038 CFDP1Q9UEE9 299 aaPredicted RBP15.17■□□□□ 0.02
RTCB-201ENST00000216038 PCGF6Q9BYE7 350 aa15.17■□□□□ 0.02
RTCB-201ENST00000216038 MYO5CQ9NQX4 1742 aa15.17■□□□□ 0.02
RTCB-201ENST00000216038 ABCA9Q8IUA7 1624 aa15.17■□□□□ 0.02
RTCB-201ENST00000216038 ZNF644Q9H582 1327 aaPredicted RBP15.16■□□□□ 0.02
RTCB-201ENST00000216038 CDC42BPBQ9Y5S2 1711 aa15.16■□□□□ 0.02
RTCB-201ENST00000216038 ITSN2Q9NZM3 1697 aa15.16■□□□□ 0.02
RTCB-201ENST00000216038 DIP2BQ9P265 1576 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms