RNA–Protein interactions for RNA: ENST00000215743.7

MMP11-201, Transcript of matrix metallopeptidase 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP11, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-201ENST00000215743 PCF11O94913 1555 aaKnown RBP29.55■■■□□ 2.32
MMP11-201ENST00000215743 GAPVD1Q14C86 1478 aa29.55■■■□□ 2.32
MMP11-201ENST00000215743 FHAD1B1AJZ9 1412 aa29.55■■■□□ 2.32
MMP11-201ENST00000215743 ATP1B4Q9UN42 357 aaPredicted RBP29.54■■■□□ 2.32
MMP11-201ENST00000215743 CCNB3Q8WWL7 1395 aa29.53■■■□□ 2.32
MMP11-201ENST00000215743 MAP3K1Q13233 1512 aa29.51■■■□□ 2.31
MMP11-201ENST00000215743 ITGAEP38570 1179 aa29.49■■■□□ 2.31
MMP11-201ENST00000215743 EFCAB5A4FU69 1503 aa29.48■■■□□ 2.31
MMP11-201ENST00000215743 LRRC9Q6ZRR7 1453 aa29.48■■■□□ 2.31
MMP11-201ENST00000215743 DIEXFQ68CQ4 756 aaKnown RBP29.45■■■□□ 2.3
MMP11-201ENST00000215743 TARBP1Q13395 1621 aaKnown RBP29.44■■■□□ 2.3
MMP11-201ENST00000215743 CFAP43Q8NDM7 1665 aa29.44■■■□□ 2.3
MMP11-201ENST00000215743 DHX57Q6P158 1386 aaKnown RBP29.4■■■□□ 2.3
MMP11-201ENST00000215743 ZNF316A6NFI3 1004 aaPredicted RBP29.37■■■□□ 2.29
MMP11-201ENST00000215743 PHLDB1Q86UU1 1377 aa29.37■■■□□ 2.29
MMP11-201ENST00000215743 FYCO1Q9BQS8 1478 aa29.37■■■□□ 2.29
MMP11-201ENST00000215743 CASKIN1Q8WXD9 1431 aa29.34■■■□□ 2.29
MMP11-201ENST00000215743 MRC2Q9UBG0 1479 aa29.34■■■□□ 2.29
MMP11-201ENST00000215743 AQRO60306 1485 aaKnown RBP eCLIP29.29■■■□□ 2.286e-9■■□□□ 14
MMP11-201ENST00000215743 PBRM1Q86U86 1689 aa29.29■■■□□ 2.28
MMP11-201ENST00000215743 FMN1Q68DA7 1419 aa29.29■■■□□ 2.28
MMP11-201ENST00000215743 SAMD9Q5K651 1589 aa29.27■■■□□ 2.28
MMP11-201ENST00000215743 FAM50AQ14320 339 aaKnown RBP29.27■■■□□ 2.28
MMP11-201ENST00000215743 SNAPC4Q5SXM2 1469 aa29.25■■■□□ 2.27
MMP11-201ENST00000215743 CLSPNQ9HAW4 1339 aa29.24■■■□□ 2.27
MMP11-201ENST00000215743 RAB3GAP2Q9H2M9 1393 aa29.19■■■□□ 2.26
MMP11-201ENST00000215743 ADAMTS12P58397 1594 aa29.16■■■□□ 2.26
MMP11-201ENST00000215743 ZNF608Q9ULD9 1512 aaPredicted RBP29.14■■■□□ 2.25
MMP11-201ENST00000215743 LRRIQ1Q96JM4 1722 aa29.13■■■□□ 2.25
MMP11-201ENST00000215743 GRIN2BQ13224 1484 aa29.12■■■□□ 2.25
MMP11-201ENST00000215743 MTUS2Q5JR59 1369 aa29.11■■■□□ 2.25
MMP11-201ENST00000215743 WDR62O43379 1518 aa29.11■■■□□ 2.25
MMP11-201ENST00000215743 IFT140Q96RY7 1462 aa29.09■■■□□ 2.25
MMP11-201ENST00000215743 SETD5Q9C0A6 1442 aa29.09■■■□□ 2.25
MMP11-201ENST00000215743 IQGAP2Q13576 1575 aa29.06■■■□□ 2.24
MMP11-201ENST00000215743 ERCC6Q03468 1493 aa29.03■■■□□ 2.24
MMP11-201ENST00000215743 FGD6Q6ZV73 1430 aa29.01■■■□□ 2.23
MMP11-201ENST00000215743 THOC2Q8NI27 1593 aaKnown RBP29■■■□□ 2.23
MMP11-201ENST00000215743 MAPKBP1O60336 1514 aa28.99■■■□□ 2.23
MMP11-201ENST00000215743 NCOA2Q15596 1464 aa28.96■■■□□ 2.23
MMP11-201ENST00000215743 EIF4G3O43432 1585 aaKnown RBP28.94■■■□□ 2.22
MMP11-201ENST00000215743 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.94■■■□□ 2.22
MMP11-201ENST00000215743 EHBP1L1Q8N3D4 1523 aa28.92■■■□□ 2.22
MMP11-201ENST00000215743 SCAF1Q9H7N4 1312 aaKnown RBP28.92■■■□□ 2.22
MMP11-201ENST00000215743 SUPT6HQ7KZ85 1726 aaKnown RBP28.91■■■□□ 2.22
MMP11-201ENST00000215743 MAGI3Q5TCQ9 1506 aa28.91■■■□□ 2.22
MMP11-201ENST00000215743 HECW1Q76N89 1606 aa28.9■■■□□ 2.22
MMP11-201ENST00000215743 ARID3CA6NKF2 412 aa28.89■■■□□ 2.22
MMP11-201ENST00000215743 CCDC18Q5T9S5 1454 aa28.88■■■□□ 2.21
MMP11-201ENST00000215743 MIER1Q8N108 512 aa28.88■■■□□ 2.21
MMP11-201ENST00000215743 MYOM3Q5VTT5 1437 aa28.87■■■□□ 2.21
MMP11-201ENST00000215743 NEUROD1Q13562 356 aa28.86■■■□□ 2.21
MMP11-201ENST00000215743 UGGT2Q9NYU1 1516 aa28.85■■■□□ 2.21
MMP11-201ENST00000215743 ACIN1Q9UKV3 1341 aaKnown RBP28.84■■■□□ 2.21
MMP11-201ENST00000215743 CDK13Q14004 1512 aaKnown RBP28.84■■■□□ 2.21
MMP11-201ENST00000215743 EPRSP07814 1512 aaKnown RBP28.83■■■□□ 2.21
MMP11-201ENST00000215743 GRIN2AQ12879 1464 aa28.82■■■□□ 2.2
MMP11-201ENST00000215743 PTPRKQ15262 1439 aa28.82■■■□□ 2.2
MMP11-201ENST00000215743 KIAA0586Q9BVV6 1533 aa28.8■■■□□ 2.2
MMP11-201ENST00000215743 SIN3AQ96ST3 1273 aa28.8■■■□□ 2.2
MMP11-201ENST00000215743 CENPBP07199 599 aaPredicted RBP28.77■■■□□ 2.2
MMP11-201ENST00000215743 KIAA0556O60303 1618 aa28.77■■■□□ 2.2
MMP11-201ENST00000215743 ARHGEF11O15085 1522 aa28.77■■■□□ 2.2
MMP11-201ENST00000215743 PTPN23Q9H3S7 1636 aa28.76■■■□□ 2.19
MMP11-201ENST00000215743 YTHDC1Q96MU7 727 aaKnown RBP28.76■■■□□ 2.19
MMP11-201ENST00000215743 DISP1Q96F81 1524 aa28.76■■■□□ 2.19
MMP11-201ENST00000215743 FBLN2P98095 1184 aa28.72■■■□□ 2.19
MMP11-201ENST00000215743 CHMP7Q8WUX9 453 aaPredicted RBP28.71■■■□□ 2.19
MMP11-201ENST00000215743 HFM1A2PYH4 1435 aa28.71■■■□□ 2.19
MMP11-201ENST00000215743 MAGI1Q96QZ7 1491 aaPredicted RBP28.7■■■□□ 2.19
MMP11-201ENST00000215743 CEP170Q5SW79 1584 aa28.66■■■□□ 2.18
MMP11-201ENST00000215743 SYNJ2O15056 1496 aa28.66■■■□□ 2.18
MMP11-201ENST00000215743 NAIPQ13075 1403 aa28.65■■■□□ 2.18
MMP11-201ENST00000215743 CHIC2Q9UKJ5 165 aa28.63■■■□□ 2.17
MMP11-201ENST00000215743 TCOF1Q13428 1488 aaKnown RBP28.62■■■□□ 2.17
MMP11-201ENST00000215743 NUP153P49790 1475 aaKnown RBP28.61■■■□□ 2.17
MMP11-201ENST00000215743 RAPGEF6Q8TEU7 1601 aa28.6■■■□□ 2.17
MMP11-201ENST00000215743 RRP7BPQ9NSQ0 103 aa28.59■■■□□ 2.17
MMP11-201ENST00000215743 UACAQ9BZF9 1416 aa28.58■■■□□ 2.17
MMP11-201ENST00000215743 MIA2Q96PC5 1412 aa28.53■■■□□ 2.16
MMP11-201ENST00000215743 PLB1Q6P1J6 1458 aa28.5■■■□□ 2.15
MMP11-201ENST00000215743 GTF3C3Q9Y5Q9 886 aa28.5■■■□□ 2.15
MMP11-201ENST00000215743 NUP160Q12769 1436 aa28.49■■■□□ 2.15
MMP11-201ENST00000215743 TIMELESSQ9UNS1 1208 aa28.48■■■□□ 2.15
MMP11-201ENST00000215743 GCC2Q8IWJ2 1684 aa28.47■■■□□ 2.15
MMP11-201ENST00000215743 JPH4Q96JJ6 628 aa28.46■■■□□ 2.15
MMP11-201ENST00000215743 CDK11AQ9UQ88 783 aaPredicted RBP28.44■■■□□ 2.14
MMP11-201ENST00000215743 TONSLQ96HA7 1378 aa28.44■■■□□ 2.14
MMP11-201ENST00000215743 KDM6BO15054 1643 aa28.44■■■□□ 2.14
MMP11-201ENST00000215743 CARMIL2Q6F5E8 1435 aa28.43■■■□□ 2.14
MMP11-201ENST00000215743 PRG4Q92954 1404 aaPredicted RBP28.43■■■□□ 2.14
MMP11-201ENST00000215743 PPP1R15AO75807 674 aaPredicted RBP28.43■■■□□ 2.14
MMP11-201ENST00000215743 ZNF644Q9H582 1327 aaPredicted RBP28.42■■■□□ 2.14
MMP11-201ENST00000215743 TRIM52Q96A61 297 aa28.41■■■□□ 2.14
MMP11-201ENST00000215743 AKNAQ7Z591 1439 aa28.39■■■□□ 2.13
MMP11-201ENST00000215743 DAPK1P53355 1430 aa28.37■■■□□ 2.13
MMP11-201ENST00000215743 TROQ12816 1431 aaPredicted RBP28.37■■■□□ 2.13
MMP11-201ENST00000215743 HIRIP3Q9BW71 556 aaPredicted RBP28.36■■■□□ 2.13
MMP11-201ENST00000215743 DNMT1P26358 1616 aaKnown RBP28.32■■■□□ 2.12
MMP11-201ENST00000215743 ABCC5O15440 1437 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms