RNA–Protein interactions for RNA: ENST00000212015.10

SIRT1-201, Transcript of sirtuin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIRT1, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRT1-201ENST00000212015 RTN4Q9NQC3 1192 aaKnown RBP24.25■■□□□ 1.47
SIRT1-201ENST00000212015 CCNB3Q8WWL7 1395 aa24.23■■□□□ 1.47
SIRT1-201ENST00000212015 CCDC136Q96JN2 1154 aa24.22■■□□□ 1.47
SIRT1-201ENST00000212015 DEKP35659 375 aaKnown RBP24.18■■□□□ 1.46
SIRT1-201ENST00000212015 RAB3GAP2Q9H2M9 1393 aa24.16■■□□□ 1.46
SIRT1-201ENST00000212015 RAPGEF2Q9Y4G8 1499 aa24.15■■□□□ 1.46
SIRT1-201ENST00000212015 EIF5BO60841 1220 aaKnown RBP24.14■■□□□ 1.46
SIRT1-201ENST00000212015 ZBTB47Q9UFB7 747 aaPredicted RBP24.14■■□□□ 1.46
SIRT1-201ENST00000212015 RRP7BPQ9NSQ0 103 aa24.13■■□□□ 1.45
SIRT1-201ENST00000212015 PPP4R2Q9NY27 417 aa24.05■■□□□ 1.44
SIRT1-201ENST00000212015 NOP58Q9Y2X3 529 aaKnown RBP24■■□□□ 1.43
SIRT1-201ENST00000212015 LAS1LQ9Y4W2 734 aaKnown RBP24■■□□□ 1.43
SIRT1-201ENST00000212015 CCER2I3L3R5 266 aa24■■□□□ 1.43
SIRT1-201ENST00000212015 EIF4G2P78344 907 aaKnown RBP eCLIP24■■□□□ 1.43
SIRT1-201ENST00000212015 BAZ1BQ9UIG0 1483 aaKnown RBP23.99■■□□□ 1.43
SIRT1-201ENST00000212015 PPP1R15AO75807 674 aaPredicted RBP23.97■■□□□ 1.43
SIRT1-201ENST00000212015 TOP2AP11388 1531 aaKnown RBP23.94■■□□□ 1.42
SIRT1-201ENST00000212015 SETD5Q9C0A6 1442 aa23.93■■□□□ 1.42
SIRT1-201ENST00000212015 MYT1LQ9UL68 1186 aa23.93■■□□□ 1.42
SIRT1-201ENST00000212015 TMC1Q8TDI8 760 aa23.92■■□□□ 1.42
SIRT1-201ENST00000212015 MSH5O43196 834 aa23.91■■□□□ 1.42
SIRT1-201ENST00000212015 FOXD1Q16676 465 aa23.89■■□□□ 1.42
SIRT1-201ENST00000212015 MTUS2Q5JR59 1369 aa23.88■■□□□ 1.41
SIRT1-201ENST00000212015 HSPA5P11021 654 aaKnown RBP23.87■■□□□ 1.41
SIRT1-201ENST00000212015 SMARCA4P51532 1647 aa23.87■■□□□ 1.41
SIRT1-201ENST00000212015 ZNF777Q9ULD5 760 aaPredicted RBP23.86■■□□□ 1.41
SIRT1-201ENST00000212015 ARXQ96QS3 562 aa23.84■■□□□ 1.41
SIRT1-201ENST00000212015 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.8■■□□□ 1.4
SIRT1-201ENST00000212015 KIF27Q86VH2 1401 aa23.8■■□□□ 1.4
SIRT1-201ENST00000212015 KDM2AQ9Y2K7 1162 aa23.79■■□□□ 1.4
SIRT1-201ENST00000212015 SMARCA2P51531 1590 aa23.79■■□□□ 1.4
SIRT1-201ENST00000212015 NEFMP07197 916 aa23.79■■□□□ 1.4
SIRT1-201ENST00000212015 KIF21BO75037 1637 aa23.73■■□□□ 1.39
SIRT1-201ENST00000212015 SLC4A1APQ9BWU0 796 aaKnown RBP23.7■■□□□ 1.39
SIRT1-201ENST00000212015 FANCIQ9NVI1 1328 aa23.7■■□□□ 1.38
SIRT1-201ENST00000212015 TIMELESSQ9UNS1 1208 aa23.67■■□□□ 1.38
SIRT1-201ENST00000212015 PAK3O75914 559 aaPredicted RBP23.66■■□□□ 1.38
SIRT1-201ENST00000212015 CCDC184Q52MB2 194 aa23.65■■□□□ 1.38
SIRT1-201ENST00000212015 ATAD2BQ9ULI0 1458 aa23.64■■□□□ 1.38
SIRT1-201ENST00000212015 ARAP1Q96P48 1450 aa23.58■■□□□ 1.37
SIRT1-201ENST00000212015 CARMIL1Q5VZK9 1371 aa23.58■■□□□ 1.36
SIRT1-201ENST00000212015 ANO8Q9HCE9 1232 aaPredicted RBP23.58■■□□□ 1.36
SIRT1-201ENST00000212015 CUX2O14529 1486 aa23.57■■□□□ 1.36
SIRT1-201ENST00000212015 L3MBTL2Q969R5 705 aa23.57■■□□□ 1.36
SIRT1-201ENST00000212015 IPO9Q96P70 1041 aaKnown RBP23.56■■□□□ 1.36
SIRT1-201ENST00000212015 FBLN2P98095 1184 aa23.55■■□□□ 1.36
SIRT1-201ENST00000212015 WDR97A6NE52 1622 aa23.55■■□□□ 1.36
SIRT1-201ENST00000212015 PHLDB1Q86UU1 1377 aa23.54■■□□□ 1.36
SIRT1-201ENST00000212015 PRKRIP1Q9H875 184 aaPredicted RBP23.53■■□□□ 1.36
SIRT1-201ENST00000212015 SYNJ1O43426 1573 aa23.51■■□□□ 1.35
SIRT1-201ENST00000212015 CANXP27824 592 aaKnown RBP23.5■■□□□ 1.35
SIRT1-201ENST00000212015 RGS3P49796 1198 aa23.48■■□□□ 1.35
SIRT1-201ENST00000212015 WASHC2AQ641Q2 1341 aa23.47■■□□□ 1.35
SIRT1-201ENST00000212015 SLC4A3P48751 1232 aa23.47■■□□□ 1.35
SIRT1-201ENST00000212015 IL27Q8NEV9 243 aa23.47■■□□□ 1.35
SIRT1-201ENST00000212015 FHOD3Q2V2M9 1422 aa23.46■■□□□ 1.35
SIRT1-201ENST00000212015 ARHGAP35Q9NRY4 1499 aa23.46■■□□□ 1.35
SIRT1-201ENST00000212015 ERICH6BQ5W0A0 696 aa23.46■■□□□ 1.35
SIRT1-201ENST00000212015 RGL3Q3MIN7 710 aa23.45■■□□□ 1.34
SIRT1-201ENST00000212015 RRBP1Q9P2E9 1410 aaKnown RBP23.43■■□□□ 1.34
SIRT1-201ENST00000212015 MPHOSPH9Q99550 1183 aa23.42■■□□□ 1.34
SIRT1-201ENST00000212015 CARD11Q9BXL7 1154 aa23.42■■□□□ 1.34
SIRT1-201ENST00000212015 FHAD1B1AJZ9 1412 aa23.41■■□□□ 1.34
SIRT1-201ENST00000212015 NUDCQ9Y266 331 aa23.41■■□□□ 1.34
SIRT1-201ENST00000212015 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.38■■□□□ 1.337e-6■■■□□ 17.7
SIRT1-201ENST00000212015 PPM1GO15355 546 aaPredicted RBP23.38■■□□□ 1.33
SIRT1-201ENST00000212015 CC2D1BQ5T0F9 858 aaKnown RBP23.38■■□□□ 1.33
SIRT1-201ENST00000212015 PLIN1O60240 522 aa23.36■■□□□ 1.33
SIRT1-201ENST00000212015 EXOC6Q8TAG9 804 aa23.36■■□□□ 1.33
SIRT1-201ENST00000212015 ZBED9Q6R2W3 1325 aa23.35■■□□□ 1.33
SIRT1-201ENST00000212015 RCAN3Q9UKA8 241 aa23.31■■□□□ 1.32
SIRT1-201ENST00000212015 PRKCSHP14314 528 aaPredicted RBP23.3■■□□□ 1.32
SIRT1-201ENST00000212015 AKNAQ7Z591 1439 aa23.3■■□□□ 1.32
SIRT1-201ENST00000212015 DDRGK1Q96HY6 314 aa23.28■■□□□ 1.32
SIRT1-201ENST00000212015 PDE4AP27815 886 aa23.28■■□□□ 1.32
SIRT1-201ENST00000212015 CCDC18Q5T9S5 1454 aa23.27■■□□□ 1.32
SIRT1-201ENST00000212015 WDR43Q15061 677 aaKnown RBP eCLIP23.25■■□□□ 1.31
SIRT1-201ENST00000212015 C11orf95C9JLR9 678 aaPredicted RBP23.25■■□□□ 1.31
SIRT1-201ENST00000212015 SKAP1Q86WV1 359 aa23.23■■□□□ 1.31
SIRT1-201ENST00000212015 DCAF11Q8TEB1 546 aa23.23■■□□□ 1.31
SIRT1-201ENST00000212015 FMN1Q68DA7 1419 aa23.22■■□□□ 1.31
SIRT1-201ENST00000212015 LRRC9Q6ZRR7 1453 aa23.21■■□□□ 1.31
SIRT1-201ENST00000212015 KIF7Q2M1P5 1343 aa23.2■■□□□ 1.31
SIRT1-201ENST00000212015 IGF1RP08069 1367 aa23.2■■□□□ 1.3
SIRT1-201ENST00000212015 BICRAQ9NZM4 1560 aa23.2■■□□□ 1.3
SIRT1-201ENST00000212015 TDRD9Q8NDG6 1382 aaKnown RBP23.2■■□□□ 1.3
SIRT1-201ENST00000212015 TCERG1O14776 1098 aaKnown RBP23.19■■□□□ 1.3
SIRT1-201ENST00000212015 SPRYD3Q8NCJ5 442 aa23.19■■□□□ 1.3
SIRT1-201ENST00000212015 PKD2Q13563 968 aa23.18■■□□□ 1.3
SIRT1-201ENST00000212015 BRPF3Q9ULD4 1205 aa23.18■■□□□ 1.3
SIRT1-201ENST00000212015 CFDP1Q9UEE9 299 aaPredicted RBP23.17■■□□□ 1.3
SIRT1-201ENST00000212015 PRXQ9BXM0 1461 aa23.17■■□□□ 1.3
SIRT1-201ENST00000212015 NEUROD2Q15784 382 aa23.16■■□□□ 1.3
SIRT1-201ENST00000212015 CCDC7Q96M83 1385 aa23.16■■□□□ 1.3
SIRT1-201ENST00000212015 SLKQ9H2G2 1235 aaPredicted RBP23.15■■□□□ 1.3
SIRT1-201ENST00000212015 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.13■■□□□ 1.29
SIRT1-201ENST00000212015 NBPF8Q3BBV2 869 aa23.13■■□□□ 1.29
SIRT1-201ENST00000212015 UPF2Q9HAU5 1272 aaKnown RBP23.12■■□□□ 1.29
SIRT1-201ENST00000212015 MAPKBP1O60336 1514 aa23.12■■□□□ 1.29
SIRT1-201ENST00000212015 ARID4BQ4LE39 1312 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms