RNA–Protein interactions for RNA: ENST00000210227.4

PTBP3-201, Transcript of polypyrimidine tract binding protein 3, humanhuman

TSL 2

Gene PTBP3, Length 734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-201ENST00000210227 CUL7Q14999 1698 aa34.46■■■■□ 3.11
PTBP3-201ENST00000210227 AEBP2Q6ZN18 517 aaPredicted RBP34.45■■■■□ 3.11
PTBP3-201ENST00000210227 ADCY10Q96PN6 1610 aa34.38■■■■□ 3.09
PTBP3-201ENST00000210227 KIF27Q86VH2 1401 aa34.37■■■■□ 3.09
PTBP3-201ENST00000210227 KIAA0586Q9BVV6 1533 aa34.36■■■■□ 3.09
PTBP3-201ENST00000210227 MAPKBP1O60336 1514 aa34.35■■■■□ 3.09
PTBP3-201ENST00000210227 IGF1RP08069 1367 aa34.34■■■■□ 3.09
PTBP3-201ENST00000210227 ABCC10Q5T3U5 1492 aa34.3■■■■□ 3.08
PTBP3-201ENST00000210227 DIP2BQ9P265 1576 aa34.29■■■■□ 3.08
PTBP3-201ENST00000210227 NPM1P06748 294 aaKnown RBP eCLIP34.22■■■■□ 3.07
PTBP3-201ENST00000210227 FAM69CQ0P6D2 419 aa34.18■■■■□ 3.06
PTBP3-201ENST00000210227 CARMIL1Q5VZK9 1371 aa34.11■■■■□ 3.05
PTBP3-201ENST00000210227 TSPOAP1O95153 1857 aa34.08■■■■□ 3.05
PTBP3-201ENST00000210227 IQGAP2Q13576 1575 aa34.08■■■■□ 3.05
PTBP3-201ENST00000210227 PTPRGP23470 1445 aa34.04■■■■□ 3.04
PTBP3-201ENST00000210227 KDM6BO15054 1643 aa34.04■■■■□ 3.04
PTBP3-201ENST00000210227 CARMIL2Q6F5E8 1435 aa34.01■■■■□ 3.03
PTBP3-201ENST00000210227 TNIKQ9UKE5 1360 aa33.98■■■■□ 3.03
PTBP3-201ENST00000210227 ABCC2Q92887 1545 aa33.97■■■■□ 3.03
PTBP3-201ENST00000210227 TTBK1Q5TCY1 1321 aaPredicted RBP33.93■■■■□ 3.02
PTBP3-201ENST00000210227 DISP1Q96F81 1524 aa33.89■■■■□ 3.02
PTBP3-201ENST00000210227 UHRF1BP1LA0JNW5 1464 aa33.87■■■■□ 3.01
PTBP3-201ENST00000210227 ASXL2Q76L83 1435 aa33.84■■■■□ 3.01
PTBP3-201ENST00000210227 PPRC1Q5VV67 1664 aaKnown RBP33.84■■■■□ 3.01
PTBP3-201ENST00000210227 RAPGEF2Q9Y4G8 1499 aa33.83■■■■□ 3.01
PTBP3-201ENST00000210227 PLB1Q6P1J6 1458 aa33.82■■■■□ 3.01
PTBP3-201ENST00000210227 GLI2P10070 1586 aa33.82■■■■□ 3
PTBP3-201ENST00000210227 UGGT2Q9NYU1 1516 aa33.82■■■■□ 3
PTBP3-201ENST00000210227 UACAQ9BZF9 1416 aa33.8■■■■□ 3
PTBP3-201ENST00000210227 KIAA0556O60303 1618 aa33.78■■■■□ 3
PTBP3-201ENST00000210227 CTTNBP2Q8WZ74 1663 aa33.74■■■□□ 2.99
PTBP3-201ENST00000210227 ZCCHC11Q5TAX3 1644 aaKnown RBP33.73■■■□□ 2.99
PTBP3-201ENST00000210227 KDM5BQ9UGL1 1544 aa33.72■■■□□ 2.99
PTBP3-201ENST00000210227 MAP3K4Q9Y6R4 1608 aa33.68■■■□□ 2.98
PTBP3-201ENST00000210227 EPRSP07814 1512 aaKnown RBP33.65■■■□□ 2.98
PTBP3-201ENST00000210227 KDM4FA0A1W2PPD8 638 aa33.64■■■□□ 2.98
PTBP3-201ENST00000210227 TEX14Q8IWB6 1497 aa33.53■■■□□ 2.96
PTBP3-201ENST00000210227 GOLGA3Q08378 1498 aa33.5■■■□□ 2.95
PTBP3-201ENST00000210227 WDR7Q9Y4E6 1490 aa33.5■■■□□ 2.95
PTBP3-201ENST00000210227 COL17A1Q9UMD9 1497 aaPredicted RBP33.5■■■□□ 2.95
PTBP3-201ENST00000210227 ABCA8O94911 1581 aa33.46■■■□□ 2.95
PTBP3-201ENST00000210227 ADGRL1O94910 1474 aa33.44■■■□□ 2.94
PTBP3-201ENST00000210227 PRXQ9BXM0 1461 aa33.44■■■□□ 2.94
PTBP3-201ENST00000210227 CFAP43Q8NDM7 1665 aa33.4■■■□□ 2.94
PTBP3-201ENST00000210227 MAGI3Q5TCQ9 1506 aa33.3■■■□□ 2.92
PTBP3-201ENST00000210227 CD109Q6YHK3 1445 aa33.27■■■□□ 2.92
PTBP3-201ENST00000210227 KCNH8Q96L42 1107 aa33.19■■■□□ 2.9
PTBP3-201ENST00000210227 SAMD9Q5K651 1589 aa33.17■■■□□ 2.9
PTBP3-201ENST00000210227 ATP10BO94823 1461 aa33.11■■■□□ 2.89
PTBP3-201ENST00000210227 KIF21BO75037 1637 aa33.09■■■□□ 2.89
PTBP3-201ENST00000210227 ABCA9Q8IUA7 1624 aa33.09■■■□□ 2.89
PTBP3-201ENST00000210227 RAPGEF6Q8TEU7 1601 aa33.09■■■□□ 2.89
PTBP3-201ENST00000210227 HECW2Q9P2P5 1572 aa33.09■■■□□ 2.89
PTBP3-201ENST00000210227 P3H3Q8IVL6 736 aa33.08■■■□□ 2.89
PTBP3-201ENST00000210227 ARID3CA6NKF2 412 aa33.07■■■□□ 2.88
PTBP3-201ENST00000210227 ARAP3Q8WWN8 1544 aa33.05■■■□□ 2.88
PTBP3-201ENST00000210227 FAM9AQ8IZU1 332 aaPredicted RBP33.04■■■□□ 2.88
PTBP3-201ENST00000210227 CSRNP3Q8WYN3 585 aa33.01■■■□□ 2.87
PTBP3-201ENST00000210227 EEA1Q15075 1411 aa32.93■■■□□ 2.86
PTBP3-201ENST00000210227 NUP153P49790 1475 aaKnown RBP32.92■■■□□ 2.86
PTBP3-201ENST00000210227 PHLDB1Q86UU1 1377 aa32.89■■■□□ 2.86
PTBP3-201ENST00000210227 NEO1Q92859 1461 aa32.87■■■□□ 2.85
PTBP3-201ENST00000210227 FHOD3Q2V2M9 1422 aa32.86■■■□□ 2.85
PTBP3-201ENST00000210227 FRMPD1Q5SYB0 1578 aa32.85■■■□□ 2.85
PTBP3-201ENST00000210227 ILDR1Q86SU0 546 aaPredicted RBP32.84■■■□□ 2.85
PTBP3-201ENST00000210227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.8■■■□□ 2.84
PTBP3-201ENST00000210227 HNRNPUL2Q1KMD3 747 aaKnown RBP32.8■■■□□ 2.84
PTBP3-201ENST00000210227 ADAMTSL3P82987 1691 aa32.8■■■□□ 2.84
PTBP3-201ENST00000210227 RANGAP1P46060 587 aaPredicted RBP32.78■■■□□ 2.84
PTBP3-201ENST00000210227 EFCAB5A4FU69 1503 aa32.77■■■□□ 2.84
PTBP3-201ENST00000210227 RAPGEF3O95398 923 aa32.76■■■□□ 2.83
PTBP3-201ENST00000210227 BCORL1Q5H9F3 1711 aa32.73■■■□□ 2.83
PTBP3-201ENST00000210227 RICTORQ6R327 1708 aa32.72■■■□□ 2.83
PTBP3-201ENST00000210227 CFAP74Q9C0B2 1584 aa32.71■■■□□ 2.83
PTBP3-201ENST00000210227 ARHGEF40Q8TER5 1519 aa32.7■■■□□ 2.83
PTBP3-201ENST00000210227 PTPRMP28827 1452 aa32.68■■■□□ 2.82
PTBP3-201ENST00000210227 TTC37Q6PGP7 1564 aa32.67■■■□□ 2.82
PTBP3-201ENST00000210227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.67■■■□□ 2.821e-8■□□□□ 9.9
PTBP3-201ENST00000210227 MADDQ8WXG6 1647 aa32.66■■■□□ 2.82
PTBP3-201ENST00000210227 PLEKHD1A6NEE1 506 aa32.63■■■□□ 2.81
PTBP3-201ENST00000210227 FANCAO15360 1455 aa32.62■■■□□ 2.81
PTBP3-201ENST00000210227 DENND4BO75064 1496 aaPredicted RBP32.61■■■□□ 2.81
PTBP3-201ENST00000210227 CDK13Q14004 1512 aaKnown RBP32.6■■■□□ 2.81
PTBP3-201ENST00000210227 AKNAQ7Z591 1439 aa32.59■■■□□ 2.81
PTBP3-201ENST00000210227 ZMYM4Q5VZL5 1548 aa32.56■■■□□ 2.8
PTBP3-201ENST00000210227 RIMS1Q86UR5 1692 aaKnown RBP32.55■■■□□ 2.8
PTBP3-201ENST00000210227 ARID4BQ4LE39 1312 aaPredicted RBP32.54■■■□□ 2.8
PTBP3-201ENST00000210227 HECW1Q76N89 1606 aa32.5■■■□□ 2.79
PTBP3-201ENST00000210227 PCF11O94913 1555 aaKnown RBP32.49■■■□□ 2.79
PTBP3-201ENST00000210227 SIGLEC1Q9BZZ2 1709 aa32.49■■■□□ 2.79
PTBP3-201ENST00000210227 ZFYVE16Q7Z3T8 1539 aa32.49■■■□□ 2.79
PTBP3-201ENST00000210227 MYO5CQ9NQX4 1742 aa32.45■■■□□ 2.78
PTBP3-201ENST00000210227 LMTK3Q96Q04 1460 aa32.43■■■□□ 2.78
PTBP3-201ENST00000210227 YEATS2Q9ULM3 1422 aa32.43■■■□□ 2.78
PTBP3-201ENST00000210227 FMN1Q68DA7 1419 aa32.42■■■□□ 2.78
PTBP3-201ENST00000210227 MAGI2Q86UL8 1455 aa32.41■■■□□ 2.78
PTBP3-201ENST00000210227 ARHGAP35Q9NRY4 1499 aa32.41■■■□□ 2.78
PTBP3-201ENST00000210227 PLCH2O75038 1416 aa32.39■■■□□ 2.78
PTBP3-201ENST00000210227 POGZQ7Z3K3 1410 aa32.39■■■□□ 2.78
PTBP3-201ENST00000210227 EHMT2Q96KQ7 1210 aa32.37■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms