RNA–Protein interactions for RNA: ENST00000204566.6

SPG21-201, Transcript of SPG21, maspardin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG21, Length 1,822 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-201ENST00000204566 CTTNBP2Q8WZ74 1663 aa36.65■■■■□ 3.46
SPG21-201ENST00000204566 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.61■■■■□ 3.45
SPG21-201ENST00000204566 SNAPC4Q5SXM2 1469 aa36.55■■■■□ 3.44
SPG21-201ENST00000204566 MAGI1Q96QZ7 1491 aaPredicted RBP36.52■■■■□ 3.44
SPG21-201ENST00000204566 RANGAP1P46060 587 aaPredicted RBP36.51■■■■□ 3.44
SPG21-201ENST00000204566 VPS8Q8N3P4 1428 aa36.51■■■■□ 3.43
SPG21-201ENST00000204566 ARAP1Q96P48 1450 aa36.48■■■■□ 3.43
SPG21-201ENST00000204566 ARHGAP35Q9NRY4 1499 aa36.47■■■■□ 3.43
SPG21-201ENST00000204566 EFCAB5A4FU69 1503 aa36.39■■■■□ 3.42
SPG21-201ENST00000204566 SYNJ2O15056 1496 aa36.35■■■■□ 3.41
SPG21-201ENST00000204566 GRIN2AQ12879 1464 aa36.35■■■■□ 3.41
SPG21-201ENST00000204566 IQGAP2Q13576 1575 aa36.27■■■■□ 3.4
SPG21-201ENST00000204566 SAMD9Q5K651 1589 aa36.24■■■■□ 3.39
SPG21-201ENST00000204566 CHMP7Q8WUX9 453 aaPredicted RBP36.17■■■■□ 3.38
SPG21-201ENST00000204566 KIAA0586Q9BVV6 1533 aa36.16■■■■□ 3.38
SPG21-201ENST00000204566 PELP1Q8IZL8 1130 aaKnown RBP36.15■■■■□ 3.38
SPG21-201ENST00000204566 TTBK1Q5TCY1 1321 aaPredicted RBP36.13■■■■□ 3.37
SPG21-201ENST00000204566 CEP170Q5SW79 1584 aa36.12■■■■□ 3.37
SPG21-201ENST00000204566 DIEXFQ68CQ4 756 aaKnown RBP36.12■■■■□ 3.37
SPG21-201ENST00000204566 FHOD3Q2V2M9 1422 aa36.11■■■■□ 3.37
SPG21-201ENST00000204566 SCAF1Q9H7N4 1312 aaKnown RBP36.1■■■■□ 3.37
SPG21-201ENST00000204566 NUP160Q12769 1436 aa36.09■■■■□ 3.37
SPG21-201ENST00000204566 UGGT2Q9NYU1 1516 aa36.09■■■■□ 3.37
SPG21-201ENST00000204566 APLP2Q06481 763 aa36.07■■■■□ 3.36
SPG21-201ENST00000204566 FBLN2P98095 1184 aa36.04■■■■□ 3.36
SPG21-201ENST00000204566 P3H3Q8IVL6 736 aa36.01■■■■□ 3.36
SPG21-201ENST00000204566 FMN1Q68DA7 1419 aa36.01■■■■□ 3.35
SPG21-201ENST00000204566 PCF11O94913 1555 aaKnown RBP36■■■■□ 3.35
SPG21-201ENST00000204566 CHD1O14646 1710 aa36■■■■□ 3.35
SPG21-201ENST00000204566 ACIN1Q9UKV3 1341 aaKnown RBP35.96■■■■□ 3.35
SPG21-201ENST00000204566 FYCO1Q9BQS8 1478 aa35.95■■■■□ 3.35
SPG21-201ENST00000204566 ZNF316A6NFI3 1004 aaPredicted RBP35.94■■■■□ 3.34
SPG21-201ENST00000204566 CENPBP07199 599 aaPredicted RBP35.93■■■■□ 3.34
SPG21-201ENST00000204566 MAP3K1Q13233 1512 aa35.92■■■■□ 3.34
SPG21-201ENST00000204566 KIAA0556O60303 1618 aa35.91■■■■□ 3.34
SPG21-201ENST00000204566 CASKIN1Q8WXD9 1431 aa35.91■■■■□ 3.34
SPG21-201ENST00000204566 TIAM1Q13009 1591 aa35.86■■■■□ 3.33
SPG21-201ENST00000204566 DISP1Q96F81 1524 aa35.86■■■■□ 3.33
SPG21-201ENST00000204566 CFAP43Q8NDM7 1665 aa35.85■■■■□ 3.33
SPG21-201ENST00000204566 CLSPNQ9HAW4 1339 aa35.77■■■■□ 3.32
SPG21-201ENST00000204566 HNRNPUL2Q1KMD3 747 aaKnown RBP35.73■■■■□ 3.31
SPG21-201ENST00000204566 CARMIL2Q6F5E8 1435 aa35.72■■■■□ 3.31
SPG21-201ENST00000204566 JPH4Q96JJ6 628 aa35.7■■■■□ 3.31
SPG21-201ENST00000204566 HECW1Q76N89 1606 aa35.69■■■■□ 3.3
SPG21-201ENST00000204566 NEUROD1Q13562 356 aa35.68■■■■□ 3.3
SPG21-201ENST00000204566 KANK4Q5T7N3 995 aaPredicted RBP35.68■■■■□ 3.3
SPG21-201ENST00000204566 LRRC9Q6ZRR7 1453 aa35.65■■■■□ 3.3
SPG21-201ENST00000204566 ATP1B4Q9UN42 357 aaPredicted RBP35.64■■■■□ 3.3
SPG21-201ENST00000204566 SHROOM2Q13796 1616 aa35.64■■■■□ 3.3
SPG21-201ENST00000204566 LRRIQ1Q96JM4 1722 aa35.64■■■■□ 3.3
SPG21-201ENST00000204566 CCDC18Q5T9S5 1454 aa35.6■■■■□ 3.29
SPG21-201ENST00000204566 CLASP1Q7Z460 1538 aa35.59■■■■□ 3.29
SPG21-201ENST00000204566 RRBP1Q9P2E9 1410 aaKnown RBP35.56■■■■□ 3.28
SPG21-201ENST00000204566 RAPGEF6Q8TEU7 1601 aa35.55■■■■□ 3.28
SPG21-201ENST00000204566 PRG4Q92954 1404 aaPredicted RBP35.53■■■■□ 3.28
SPG21-201ENST00000204566 EPRSP07814 1512 aaKnown RBP35.48■■■■□ 3.27
SPG21-201ENST00000204566 EHBP1L1Q8N3D4 1523 aa35.44■■■■□ 3.26
SPG21-201ENST00000204566 NUP153P49790 1475 aaKnown RBP35.41■■■■□ 3.26
SPG21-201ENST00000204566 MTUS2Q5JR59 1369 aa35.4■■■■□ 3.26
SPG21-201ENST00000204566 DHX57Q6P158 1386 aaKnown RBP35.4■■■■□ 3.26
SPG21-201ENST00000204566 CDK13Q14004 1512 aaKnown RBP35.38■■■■□ 3.25
SPG21-201ENST00000204566 PLB1Q6P1J6 1458 aa35.38■■■■□ 3.25
SPG21-201ENST00000204566 ABCA8O94911 1581 aa35.37■■■■□ 3.25
SPG21-201ENST00000204566 GTF3C3Q9Y5Q9 886 aa35.36■■■■□ 3.25
SPG21-201ENST00000204566 SUPT6HQ7KZ85 1726 aaKnown RBP35.32■■■■□ 3.24
SPG21-201ENST00000204566 MAGI3Q5TCQ9 1506 aa35.31■■■■□ 3.24
SPG21-201ENST00000204566 PTPRGP23470 1445 aa35.31■■■■□ 3.24
SPG21-201ENST00000204566 ERCC6L2Q5T890 1561 aa35.29■■■■□ 3.24
SPG21-201ENST00000204566 PHLDB1Q86UU1 1377 aa35.28■■■■□ 3.24
SPG21-201ENST00000204566 CCNB3Q8WWL7 1395 aa35.28■■■■□ 3.24
SPG21-201ENST00000204566 NCOA2Q15596 1464 aa35.22■■■■□ 3.23
SPG21-201ENST00000204566 ARHGEF11O15085 1522 aa35.2■■■■□ 3.23
SPG21-201ENST00000204566 MIER1Q8N108 512 aa35.18■■■■□ 3.22
SPG21-201ENST00000204566 ARID3CA6NKF2 412 aa35.16■■■■□ 3.22
SPG21-201ENST00000204566 CDK11AQ9UQ88 783 aaPredicted RBP35.15■■■■□ 3.22
SPG21-201ENST00000204566 UACAQ9BZF9 1416 aa35.14■■■■□ 3.22
SPG21-201ENST00000204566 OSCARQ8IYS5 282 aa35.13■■■■□ 3.21
SPG21-201ENST00000204566 MYOM3Q5VTT5 1437 aa35.09■■■■□ 3.21
SPG21-201ENST00000204566 ABCC2Q92887 1545 aa35.08■■■■□ 3.21
SPG21-201ENST00000204566 FGD6Q6ZV73 1430 aa35.08■■■■□ 3.21
SPG21-201ENST00000204566 TROQ12816 1431 aaPredicted RBP35.07■■■■□ 3.21
SPG21-201ENST00000204566 ATP10BO94823 1461 aa35.07■■■■□ 3.2
SPG21-201ENST00000204566 ADCY10Q96PN6 1610 aa35.05■■■■□ 3.2
SPG21-201ENST00000204566 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.05■■■■□ 3.2
SPG21-201ENST00000204566 UHRF1BP1LA0JNW5 1464 aa34.99■■■■□ 3.19
SPG21-201ENST00000204566 PTPN23Q9H3S7 1636 aa34.93■■■■□ 3.18
SPG21-201ENST00000204566 FAM50AQ14320 339 aaKnown RBP34.93■■■■□ 3.18
SPG21-201ENST00000204566 YTHDC1Q96MU7 727 aaKnown RBP34.92■■■■□ 3.18
SPG21-201ENST00000204566 KIF14Q15058 1648 aa34.92■■■■□ 3.18
SPG21-201ENST00000204566 MIA2Q96PC5 1412 aa34.92■■■■□ 3.18
SPG21-201ENST00000204566 PLEKHD1A6NEE1 506 aa34.9■■■■□ 3.18
SPG21-201ENST00000204566 TCOF1Q13428 1488 aaKnown RBP34.89■■■■□ 3.18
SPG21-201ENST00000204566 ITSN2Q9NZM3 1697 aa34.88■■■■□ 3.17
SPG21-201ENST00000204566 RAB3GAP2Q9H2M9 1393 aa34.87■■■■□ 3.17
SPG21-201ENST00000204566 SETD5Q9C0A6 1442 aa34.86■■■■□ 3.17
SPG21-201ENST00000204566 ZCCHC11Q5TAX3 1644 aaKnown RBP34.84■■■■□ 3.17
SPG21-201ENST00000204566 KDM5BQ9UGL1 1544 aa34.84■■■■□ 3.17
SPG21-201ENST00000204566 MAPKBP1O60336 1514 aa34.81■■■■□ 3.16
SPG21-201ENST00000204566 ITGAEP38570 1179 aa34.81■■■■□ 3.16
SPG21-201ENST00000204566 ABCC10Q5T3U5 1492 aa34.77■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms