RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 EEA1Q15075 1411 aa29.41■■■□□ 2.3
MRPL28-201ENST00000199706 PRXQ9BXM0 1461 aa29.36■■■□□ 2.29
MRPL28-201ENST00000199706 ERCC6L2Q5T890 1561 aa29.35■■■□□ 2.29
MRPL28-201ENST00000199706 CYB5RLQ6IPT4 315 aa29.35■■■□□ 2.29
MRPL28-201ENST00000199706 JPH4Q96JJ6 628 aa29.34■■■□□ 2.29
MRPL28-201ENST00000199706 PRG4Q92954 1404 aaPredicted RBP29.32■■■□□ 2.28
MRPL28-201ENST00000199706 IQGAP2Q13576 1575 aa29.3■■■□□ 2.28
MRPL28-201ENST00000199706 CHIC1Q5VXU3 224 aa29.29■■■□□ 2.28
MRPL28-201ENST00000199706 CTTNBP2Q8WZ74 1663 aa29.22■■■□□ 2.27
MRPL28-201ENST00000199706 CSRNP3Q8WYN3 585 aa29.2■■■□□ 2.26
MRPL28-201ENST00000199706 UGGT2Q9NYU1 1516 aa29.18■■■□□ 2.26
MRPL28-201ENST00000199706 CARMIL2Q6F5E8 1435 aa29.13■■■□□ 2.25
MRPL28-201ENST00000199706 KIF21BO75037 1637 aa29.09■■■□□ 2.25
MRPL28-201ENST00000199706 DISP1Q96F81 1524 aa29.07■■■□□ 2.24
MRPL28-201ENST00000199706 TNIKQ9UKE5 1360 aa29.02■■■□□ 2.24
MRPL28-201ENST00000199706 KIAA0556O60303 1618 aa29.02■■■□□ 2.24
MRPL28-201ENST00000199706 GOLGA3Q08378 1498 aa29■■■□□ 2.23
MRPL28-201ENST00000199706 PTPRGP23470 1445 aa28.97■■■□□ 2.23
MRPL28-201ENST00000199706 ADCY10Q96PN6 1610 aa28.94■■■□□ 2.22
MRPL28-201ENST00000199706 UHRF1BP1LA0JNW5 1464 aa28.89■■■□□ 2.22
MRPL28-201ENST00000199706 FAM9AQ8IZU1 332 aaPredicted RBP28.88■■■□□ 2.21
MRPL28-201ENST00000199706 MAPKBP1O60336 1514 aa28.86■■■□□ 2.21
MRPL28-201ENST00000199706 SAMD9Q5K651 1589 aa28.86■■■□□ 2.21
MRPL28-201ENST00000199706 ABCC2Q92887 1545 aa28.82■■■□□ 2.2
MRPL28-201ENST00000199706 UACAQ9BZF9 1416 aa28.81■■■□□ 2.2
MRPL28-201ENST00000199706 EFCAB5A4FU69 1503 aa28.75■■■□□ 2.19
MRPL28-201ENST00000199706 NPM1P06748 294 aaKnown RBP eCLIP28.75■■■□□ 2.19
MRPL28-201ENST00000199706 TRHP20396 242 aaPredicted RBP28.72■■■□□ 2.19
MRPL28-201ENST00000199706 KDM5BQ9UGL1 1544 aa28.72■■■□□ 2.19
MRPL28-201ENST00000199706 ABCA8O94911 1581 aa28.71■■■□□ 2.19
MRPL28-201ENST00000199706 KIF13AQ9H1H9 1805 aa28.67■■■□□ 2.18
MRPL28-201ENST00000199706 ABCC10Q5T3U5 1492 aa28.66■■■□□ 2.18
MRPL28-201ENST00000199706 PLB1Q6P1J6 1458 aa28.66■■■□□ 2.18
MRPL28-201ENST00000199706 TTBK1Q5TCY1 1321 aaPredicted RBP28.63■■■□□ 2.17
MRPL28-201ENST00000199706 DIP2BQ9P265 1576 aa28.62■■■□□ 2.17
MRPL28-201ENST00000199706 ZCCHC11Q5TAX3 1644 aaKnown RBP28.61■■■□□ 2.17
MRPL28-201ENST00000199706 UBTFP17480 764 aaKnown RBP28.6■■■□□ 2.17
MRPL28-201ENST00000199706 ASXL2Q76L83 1435 aa28.56■■■□□ 2.16
MRPL28-201ENST00000199706 RAPGEF6Q8TEU7 1601 aa28.54■■■□□ 2.16
MRPL28-201ENST00000199706 FHOD3Q2V2M9 1422 aa28.53■■■□□ 2.16
MRPL28-201ENST00000199706 GLI2P10070 1586 aa28.52■■■□□ 2.16
MRPL28-201ENST00000199706 P3H3Q8IVL6 736 aa28.5■■■□□ 2.15
MRPL28-201ENST00000199706 ARHGAP35Q9NRY4 1499 aa28.48■■■□□ 2.15
MRPL28-201ENST00000199706 WDR7Q9Y4E6 1490 aa28.46■■■□□ 2.15
MRPL28-201ENST00000199706 FAM69CQ0P6D2 419 aa28.44■■■□□ 2.14
MRPL28-201ENST00000199706 FMN1Q68DA7 1419 aa28.43■■■□□ 2.14
MRPL28-201ENST00000199706 NUP153P49790 1475 aaKnown RBP28.42■■■□□ 2.14
MRPL28-201ENST00000199706 EPRSP07814 1512 aaKnown RBP28.42■■■□□ 2.14
MRPL28-201ENST00000199706 ATP10BO94823 1461 aa28.4■■■□□ 2.14
MRPL28-201ENST00000199706 RANGAP1P46060 587 aaPredicted RBP28.39■■■□□ 2.14
MRPL28-201ENST00000199706 EHMT2Q96KQ7 1210 aa28.38■■■□□ 2.13
MRPL28-201ENST00000199706 MAP3K4Q9Y6R4 1608 aa28.36■■■□□ 2.13
MRPL28-201ENST00000199706 HECW1Q76N89 1606 aa28.3■■■□□ 2.12
MRPL28-201ENST00000199706 PPRC1Q5VV67 1664 aaKnown RBP28.29■■■□□ 2.12
MRPL28-201ENST00000199706 CFAP43Q8NDM7 1665 aa28.29■■■□□ 2.12
MRPL28-201ENST00000199706 CLIP1P30622 1438 aa28.28■■■□□ 2.12
MRPL28-201ENST00000199706 TSPOAP1O95153 1857 aa28.26■■■□□ 2.11
MRPL28-201ENST00000199706 TEX14Q8IWB6 1497 aa28.22■■■□□ 2.11
MRPL28-201ENST00000199706 ABCA9Q8IUA7 1624 aa28.21■■■□□ 2.11
MRPL28-201ENST00000199706 MAGI3Q5TCQ9 1506 aa28.19■■■□□ 2.1
MRPL28-201ENST00000199706 CASKIN1Q8WXD9 1431 aa28.18■■■□□ 2.1
MRPL28-201ENST00000199706 PCF11O94913 1555 aaKnown RBP28.16■■■□□ 2.1
MRPL28-201ENST00000199706 FYCO1Q9BQS8 1478 aa28.15■■■□□ 2.1
MRPL28-201ENST00000199706 ARID3CA6NKF2 412 aa28.15■■■□□ 2.1
MRPL28-201ENST00000199706 CDK13Q14004 1512 aaKnown RBP28.14■■■□□ 2.1
MRPL28-201ENST00000199706 CEP162Q5TB80 1403 aa28.14■■■□□ 2.1
MRPL28-201ENST00000199706 CD109Q6YHK3 1445 aa28.14■■■□□ 2.1
MRPL28-201ENST00000199706 KDM6BO15054 1643 aa28.14■■■□□ 2.09
MRPL28-201ENST00000199706 CCDC18Q5T9S5 1454 aa28.12■■■□□ 2.09
MRPL28-201ENST00000199706 PLEKHD1A6NEE1 506 aa28.11■■■□□ 2.09
MRPL28-201ENST00000199706 LRRIQ1Q96JM4 1722 aa28.1■■■□□ 2.09
MRPL28-201ENST00000199706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.1■■■□□ 2.09
MRPL28-201ENST00000199706 HNRNPUL2Q1KMD3 747 aaKnown RBP28.1■■■□□ 2.09
MRPL28-201ENST00000199706 KCNH8Q96L42 1107 aa28.1■■■□□ 2.09
MRPL28-201ENST00000199706 CDK11AQ9UQ88 783 aaPredicted RBP28.04■■■□□ 2.08
MRPL28-201ENST00000199706 PHLDB1Q86UU1 1377 aa28.01■■■□□ 2.07
MRPL28-201ENST00000199706 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.01■■■□□ 2.07
MRPL28-201ENST00000199706 TROQ12816 1431 aaPredicted RBP28■■■□□ 2.07
MRPL28-201ENST00000199706 NEO1Q92859 1461 aa27.98■■■□□ 2.07
MRPL28-201ENST00000199706 KIF14Q15058 1648 aa27.97■■■□□ 2.07
MRPL28-201ENST00000199706 TTC37Q6PGP7 1564 aa27.97■■■□□ 2.07
MRPL28-201ENST00000199706 ATP1B4Q9UN42 357 aaPredicted RBP27.96■■■□□ 2.07
MRPL28-201ENST00000199706 ARAP3Q8WWN8 1544 aa27.96■■■□□ 2.07
MRPL28-201ENST00000199706 LOC105371045A0A1W2PR82 267 aa27.95■■■□□ 2.06
MRPL28-201ENST00000199706 CFAP74Q9C0B2 1584 aa27.94■■■□□ 2.06
MRPL28-201ENST00000199706 COL17A1Q9UMD9 1497 aaPredicted RBP27.94■■■□□ 2.06
MRPL28-201ENST00000199706 MYO5CQ9NQX4 1742 aa27.88■■■□□ 2.05
MRPL28-201ENST00000199706 PLCH2O75038 1416 aa27.85■■■□□ 2.05
MRPL28-201ENST00000199706 VPS8Q8N3P4 1428 aa27.85■■■□□ 2.05
MRPL28-201ENST00000199706 FANCAO15360 1455 aa27.84■■■□□ 2.05
MRPL28-201ENST00000199706 AKNAQ7Z591 1439 aa27.76■■■□□ 2.04
MRPL28-201ENST00000199706 PREX2Q70Z35 1606 aa27.76■■■□□ 2.03
MRPL28-201ENST00000199706 EHBP1L1Q8N3D4 1523 aa27.76■■■□□ 2.03
MRPL28-201ENST00000199706 FRMPD1Q5SYB0 1578 aa27.73■■■□□ 2.03
MRPL28-201ENST00000199706 MAP3K1Q13233 1512 aa27.73■■■□□ 2.03
MRPL28-201ENST00000199706 RICTORQ6R327 1708 aa27.72■■■□□ 2.03
MRPL28-201ENST00000199706 TIAM1Q13009 1591 aa27.71■■■□□ 2.03
MRPL28-201ENST00000199706 CDC42BPBQ9Y5S2 1711 aa27.71■■■□□ 2.03
MRPL28-201ENST00000199706 DENND4BO75064 1496 aaPredicted RBP27.7■■■□□ 2.03
MRPL28-201ENST00000199706 CDC42BPAQ5VT25 1732 aa27.7■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms