RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 CLIP1P30622 1438 aa34.99■■■■□ 3.19
HOXC8-201ENST00000040584 CTTNBP2Q8WZ74 1663 aa34.97■■■■□ 3.19
HOXC8-201ENST00000040584 CHD1O14646 1710 aa34.83■■■■□ 3.17
HOXC8-201ENST00000040584 CEP170Q5SW79 1584 aa34.82■■■■□ 3.17
HOXC8-201ENST00000040584 NUP160Q12769 1436 aa34.79■■■■□ 3.16
HOXC8-201ENST00000040584 ARHGAP35Q9NRY4 1499 aa34.79■■■■□ 3.16
HOXC8-201ENST00000040584 KIAA0586Q9BVV6 1533 aa34.78■■■■□ 3.16
HOXC8-201ENST00000040584 IQGAP2Q13576 1575 aa34.77■■■■□ 3.16
HOXC8-201ENST00000040584 ARAP1Q96P48 1450 aa34.7■■■■□ 3.15
HOXC8-201ENST00000040584 P3H3Q8IVL6 736 aa34.69■■■■□ 3.14
HOXC8-201ENST00000040584 EFCAB5A4FU69 1503 aa34.65■■■■□ 3.14
HOXC8-201ENST00000040584 VPS8Q8N3P4 1428 aa34.6■■■■□ 3.13
HOXC8-201ENST00000040584 UGGT2Q9NYU1 1516 aa34.6■■■■□ 3.13
HOXC8-201ENST00000040584 SAMD9Q5K651 1589 aa34.6■■■■□ 3.13
HOXC8-201ENST00000040584 FHOD3Q2V2M9 1422 aa34.58■■■■□ 3.13
HOXC8-201ENST00000040584 JPH4Q96JJ6 628 aa34.56■■■■□ 3.12
HOXC8-201ENST00000040584 DISP1Q96F81 1524 aa34.48■■■■□ 3.11
HOXC8-201ENST00000040584 CLASP1Q7Z460 1538 aa34.42■■■■□ 3.1
HOXC8-201ENST00000040584 KIAA0556O60303 1618 aa34.42■■■■□ 3.1
HOXC8-201ENST00000040584 HRCP23327 699 aa34.37■■■■□ 3.09
HOXC8-201ENST00000040584 CARMIL2Q6F5E8 1435 aa34.36■■■■□ 3.09
HOXC8-201ENST00000040584 OSCARQ8IYS5 282 aa34.36■■■■□ 3.09
HOXC8-201ENST00000040584 FMN1Q68DA7 1419 aa34.36■■■■□ 3.09
HOXC8-201ENST00000040584 PRG4Q92954 1404 aaPredicted RBP34.36■■■■□ 3.09
HOXC8-201ENST00000040584 SHROOM2Q13796 1616 aa34.35■■■■□ 3.09
HOXC8-201ENST00000040584 PPARGC1BQ86YN6 1023 aaKnown RBP34.33■■■■□ 3.09
HOXC8-201ENST00000040584 TTBK1Q5TCY1 1321 aaPredicted RBP34.31■■■■□ 3.08
HOXC8-201ENST00000040584 PCGF6Q9BYE7 350 aa34.29■■■■□ 3.08
HOXC8-201ENST00000040584 PCF11O94913 1555 aaKnown RBP34.28■■■■□ 3.08
HOXC8-201ENST00000040584 APLP2Q06481 763 aa34.27■■■■□ 3.08
HOXC8-201ENST00000040584 ATP1B4Q9UN42 357 aaPredicted RBP34.25■■■■□ 3.07
HOXC8-201ENST00000040584 CASKIN1Q8WXD9 1431 aa34.24■■■■□ 3.07
HOXC8-201ENST00000040584 ERCC6L2Q5T890 1561 aa34.21■■■■□ 3.07
HOXC8-201ENST00000040584 FYCO1Q9BQS8 1478 aa34.2■■■■□ 3.07
HOXC8-201ENST00000040584 PTPRGP23470 1445 aa34.1■■■■□ 3.05
HOXC8-201ENST00000040584 PLB1Q6P1J6 1458 aa34.06■■■■□ 3.04
HOXC8-201ENST00000040584 KANK4Q5T7N3 995 aaPredicted RBP34.06■■■■□ 3.04
HOXC8-201ENST00000040584 TIAM1Q13009 1591 aa34.05■■■■□ 3.04
HOXC8-201ENST00000040584 MAP3K1Q13233 1512 aa34.04■■■■□ 3.04
HOXC8-201ENST00000040584 HECW1Q76N89 1606 aa34.03■■■■□ 3.04
HOXC8-201ENST00000040584 RAPGEF6Q8TEU7 1601 aa34.03■■■■□ 3.04
HOXC8-201ENST00000040584 TRIM26Q12899 539 aaPredicted RBP34.03■■■■□ 3.04
HOXC8-201ENST00000040584 LRRIQ1Q96JM4 1722 aa34.02■■■■□ 3.04
HOXC8-201ENST00000040584 ARID3CA6NKF2 412 aa33.99■■■■□ 3.03
HOXC8-201ENST00000040584 CFAP43Q8NDM7 1665 aa33.99■■■■□ 3.03
HOXC8-201ENST00000040584 ABCA8O94911 1581 aa33.96■■■■□ 3.03
HOXC8-201ENST00000040584 NUP153P49790 1475 aaKnown RBP33.96■■■■□ 3.03
HOXC8-201ENST00000040584 EPRSP07814 1512 aaKnown RBP33.95■■■■□ 3.03
HOXC8-201ENST00000040584 CCDC18Q5T9S5 1454 aa33.93■■■■□ 3.02
HOXC8-201ENST00000040584 LRRC9Q6ZRR7 1453 aa33.92■■■■□ 3.02
HOXC8-201ENST00000040584 CDK13Q14004 1512 aaKnown RBP33.91■■■■□ 3.02
HOXC8-201ENST00000040584 UACAQ9BZF9 1416 aa33.88■■■■□ 3.01
HOXC8-201ENST00000040584 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.82■■■■□ 3.01
HOXC8-201ENST00000040584 HNRNPUL2Q1KMD3 747 aaKnown RBP33.82■■■■□ 3.01
HOXC8-201ENST00000040584 MTUS2Q5JR59 1369 aa33.8■■■■□ 3
HOXC8-201ENST00000040584 MAGI3Q5TCQ9 1506 aa33.77■■■■□ 3
HOXC8-201ENST00000040584 ABCC2Q92887 1545 aa33.77■■■■□ 3
HOXC8-201ENST00000040584 ARHGEF11O15085 1522 aa33.76■■■■□ 3
HOXC8-201ENST00000040584 ATP10BO94823 1461 aa33.76■■■■□ 3
HOXC8-201ENST00000040584 UHRF1BP1LA0JNW5 1464 aa33.7■■■□□ 2.99
HOXC8-201ENST00000040584 EHBP1L1Q8N3D4 1523 aa33.7■■■□□ 2.99
HOXC8-201ENST00000040584 CDK11AQ9UQ88 783 aaPredicted RBP33.69■■■□□ 2.98
HOXC8-201ENST00000040584 RIMBP3CA6NJZ7 1639 aa33.63■■■□□ 2.97
HOXC8-201ENST00000040584 RIMBP3BA6NNM3 1639 aa33.63■■■□□ 2.97
HOXC8-201ENST00000040584 ADCY10Q96PN6 1610 aa33.63■■■□□ 2.97
HOXC8-201ENST00000040584 RIMBP3Q9UFD9 1639 aa33.63■■■□□ 2.97
HOXC8-201ENST00000040584 PHLDB1Q86UU1 1377 aa33.61■■■□□ 2.97
HOXC8-201ENST00000040584 PLEKHD1A6NEE1 506 aa33.6■■■□□ 2.97
HOXC8-201ENST00000040584 SUPT6HQ7KZ85 1726 aaKnown RBP33.59■■■□□ 2.97
HOXC8-201ENST00000040584 NCOA2Q15596 1464 aa33.59■■■□□ 2.97
HOXC8-201ENST00000040584 TROQ12816 1431 aaPredicted RBP33.58■■■□□ 2.97
HOXC8-201ENST00000040584 KDM5BQ9UGL1 1544 aa33.58■■■□□ 2.97
HOXC8-201ENST00000040584 ZCCHC11Q5TAX3 1644 aaKnown RBP33.55■■■□□ 2.96
HOXC8-201ENST00000040584 CYB5RLQ6IPT4 315 aa33.52■■■□□ 2.96
HOXC8-201ENST00000040584 RRBP1Q9P2E9 1410 aaKnown RBP33.49■■■□□ 2.95
HOXC8-201ENST00000040584 KIF14Q15058 1648 aa33.45■■■□□ 2.94
HOXC8-201ENST00000040584 ZEB1P37275 1124 aaPredicted RBP33.44■■■□□ 2.94
HOXC8-201ENST00000040584 CCNB3Q8WWL7 1395 aa33.44■■■□□ 2.94
HOXC8-201ENST00000040584 MYOM3Q5VTT5 1437 aa33.41■■■□□ 2.94
HOXC8-201ENST00000040584 NPM1P06748 294 aaKnown RBP eCLIP33.39■■■□□ 2.94
HOXC8-201ENST00000040584 FGD6Q6ZV73 1430 aa33.37■■■□□ 2.93
HOXC8-201ENST00000040584 KCNH8Q96L42 1107 aa33.35■■■□□ 2.93
HOXC8-201ENST00000040584 FAM50AQ14320 339 aaKnown RBP33.32■■■□□ 2.92
HOXC8-201ENST00000040584 ABCC10Q5T3U5 1492 aa33.32■■■□□ 2.92
HOXC8-201ENST00000040584 ASXL2Q76L83 1435 aa33.29■■■□□ 2.92
HOXC8-201ENST00000040584 WDR7Q9Y4E6 1490 aa33.29■■■□□ 2.92
HOXC8-201ENST00000040584 GPATCH8Q9UKJ3 1502 aaKnown RBP33.27■■■□□ 2.92
HOXC8-201ENST00000040584 MIA2Q96PC5 1412 aa33.24■■■□□ 2.91
HOXC8-201ENST00000040584 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.24■■■□□ 2.91
HOXC8-201ENST00000040584 PTPN23Q9H3S7 1636 aa33.23■■■□□ 2.91
HOXC8-201ENST00000040584 ITGAEP38570 1179 aa33.22■■■□□ 2.91
HOXC8-201ENST00000040584 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.22■■■□□ 2.91
HOXC8-201ENST00000040584 TTC37Q6PGP7 1564 aa33.2■■■□□ 2.91
HOXC8-201ENST00000040584 CFDP1Q9UEE9 299 aaPredicted RBP33.2■■■□□ 2.91
HOXC8-201ENST00000040584 ITSN2Q9NZM3 1697 aa33.2■■■□□ 2.91
HOXC8-201ENST00000040584 CDC42BPAQ5VT25 1732 aa33.2■■■□□ 2.9
HOXC8-201ENST00000040584 TCOF1Q13428 1488 aaKnown RBP33.17■■■□□ 2.9
HOXC8-201ENST00000040584 ZNF644Q9H582 1327 aaPredicted RBP33.15■■■□□ 2.9
HOXC8-201ENST00000040584 ZNF777Q9ULD5 760 aaPredicted RBP33.12■■■□□ 2.89
HOXC8-201ENST00000040584 MAPKBP1O60336 1514 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms