RNA–Protein interactions for RNA: ENST00000002829.7

SEMA3F-201, Transcript of semaphorin 3F, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3F, Length 3,802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-201ENST00000002829 FOXD1Q16676 465 aa19.01■□□□□ 0.63
SEMA3F-201ENST00000002829 ATAD2BQ9ULI0 1458 aa19.01■□□□□ 0.63
SEMA3F-201ENST00000002829 CCNB3Q8WWL7 1395 aa18.99■□□□□ 0.63
SEMA3F-201ENST00000002829 MTUS2Q5JR59 1369 aa18.99■□□□□ 0.63
SEMA3F-201ENST00000002829 NBR1Q14596 966 aa18.95■□□□□ 0.62
SEMA3F-201ENST00000002829 CARMIL1Q5VZK9 1371 aa18.94■□□□□ 0.62
SEMA3F-201ENST00000002829 RAB3GAP2Q9H2M9 1393 aa18.91■□□□□ 0.62
SEMA3F-201ENST00000002829 KDM2AQ9Y2K7 1162 aa18.9■□□□□ 0.62
SEMA3F-201ENST00000002829 DHX57Q6P158 1386 aaKnown RBP18.89■□□□□ 0.62
SEMA3F-201ENST00000002829 TDRD9Q8NDG6 1382 aaKnown RBP18.89■□□□□ 0.61
SEMA3F-201ENST00000002829 SYNJ1O43426 1573 aa18.86■□□□□ 0.61
SEMA3F-201ENST00000002829 SENP3Q9H4L4 574 aaPredicted RBP18.83■□□□□ 0.6
SEMA3F-201ENST00000002829 CDK11AQ9UQ88 783 aaPredicted RBP18.83■□□□□ 0.6
SEMA3F-201ENST00000002829 RBM19Q9Y4C8 960 aaKnown RBP18.82■□□□□ 0.6
SEMA3F-201ENST00000002829 FHOD3Q2V2M9 1422 aa18.81■□□□□ 0.6
SEMA3F-201ENST00000002829 SLC4A1APQ9BWU0 796 aaKnown RBP18.79■□□□□ 0.6
SEMA3F-201ENST00000002829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.78■□□□□ 0.6
SEMA3F-201ENST00000002829 MRS2Q9HD23 443 aa18.78■□□□□ 0.6
SEMA3F-201ENST00000002829 DNAJC5BQ9UF47 199 aa18.76■□□□□ 0.59
SEMA3F-201ENST00000002829 NPM2Q86SE8 214 aaKnown RBP18.76■□□□□ 0.59
SEMA3F-201ENST00000002829 KIF21BO75037 1637 aa18.74■□□□□ 0.59
SEMA3F-201ENST00000002829 ARAP1Q96P48 1450 aa18.73■□□□□ 0.59
SEMA3F-201ENST00000002829 RTN4Q9NQC3 1192 aaKnown RBP18.71■□□□□ 0.59
SEMA3F-201ENST00000002829 RGL3Q3MIN7 710 aa18.7■□□□□ 0.58
SEMA3F-201ENST00000002829 SETD5Q9C0A6 1442 aa18.7■□□□□ 0.58
SEMA3F-201ENST00000002829 IGF1RP08069 1367 aa18.68■□□□□ 0.58
SEMA3F-201ENST00000002829 EIF4G2P78344 907 aaKnown RBP eCLIP18.66■□□□□ 0.58
SEMA3F-201ENST00000002829 CHMP7Q8WUX9 453 aaPredicted RBP18.65■□□□□ 0.58
SEMA3F-201ENST00000002829 RAD54L2Q9Y4B4 1467 aa18.65■□□□□ 0.58
SEMA3F-201ENST00000002829 PHLDB1Q86UU1 1377 aa18.65■□□□□ 0.58
SEMA3F-201ENST00000002829 PPP1R15AO75807 674 aaPredicted RBP18.65■□□□□ 0.58
SEMA3F-201ENST00000002829 EIF4G1Q04637 1599 aaKnown RBP18.65■□□□□ 0.58
SEMA3F-201ENST00000002829 B4GALNT3Q6L9W6 998 aa18.64■□□□□ 0.57
SEMA3F-201ENST00000002829 HSPA5P11021 654 aaKnown RBP18.62■□□□□ 0.57
SEMA3F-201ENST00000002829 CLSPNQ9HAW4 1339 aa18.62■□□□□ 0.57
SEMA3F-201ENST00000002829 CADPSQ9ULU8 1353 aa18.62■□□□□ 0.57
SEMA3F-201ENST00000002829 RTL5Q5HYW3 569 aaPredicted RBP18.6■□□□□ 0.57
SEMA3F-201ENST00000002829 CFDP1Q9UEE9 299 aaPredicted RBP18.56■□□□□ 0.56
SEMA3F-201ENST00000002829 BICRAQ9NZM4 1560 aa18.56■□□□□ 0.56
SEMA3F-201ENST00000002829 TMC1Q8TDI8 760 aa18.54■□□□□ 0.56
SEMA3F-201ENST00000002829 L3MBTL2Q969R5 705 aa18.54■□□□□ 0.56
SEMA3F-201ENST00000002829 ARHGAP35Q9NRY4 1499 aa18.54■□□□□ 0.56
SEMA3F-201ENST00000002829 ZNF644Q9H582 1327 aaPredicted RBP18.52■□□□□ 0.55
SEMA3F-201ENST00000002829 FGD5Q6ZNL6 1462 aa18.51■□□□□ 0.55
SEMA3F-201ENST00000002829 FHAD1B1AJZ9 1412 aa18.51■□□□□ 0.55
SEMA3F-201ENST00000002829 NESP48681 1621 aa18.5■□□□□ 0.55
SEMA3F-201ENST00000002829 MPHOSPH9Q99550 1183 aa18.49■□□□□ 0.55
SEMA3F-201ENST00000002829 CUX1P39880 1505 aa18.48■□□□□ 0.55
SEMA3F-201ENST00000002829 EIF5BO60841 1220 aaKnown RBP18.46■□□□□ 0.55
SEMA3F-201ENST00000002829 TSPY4P0CV99 314 aa18.46■□□□□ 0.55
SEMA3F-201ENST00000002829 TSPY10P0CW01 314 aa18.46■□□□□ 0.55
SEMA3F-201ENST00000002829 CHGAP10645 457 aaKnown RBP18.46■□□□□ 0.55
SEMA3F-201ENST00000002829 PRXQ9BXM0 1461 aa18.45■□□□□ 0.54
SEMA3F-201ENST00000002829 CCDC136Q96JN2 1154 aa18.45■□□□□ 0.54
SEMA3F-201ENST00000002829 DEKP35659 375 aaKnown RBP18.44■□□□□ 0.54
SEMA3F-201ENST00000002829 FANCD2Q9BXW9 1451 aa18.43■□□□□ 0.54
SEMA3F-201ENST00000002829 CARD11Q9BXL7 1154 aa18.41■□□□□ 0.54
SEMA3F-201ENST00000002829 CCDC184Q52MB2 194 aa18.41■□□□□ 0.54
SEMA3F-201ENST00000002829 PKD2Q13563 968 aa18.4■□□□□ 0.54
SEMA3F-201ENST00000002829 DCAF11Q8TEB1 546 aa18.4■□□□□ 0.54
SEMA3F-201ENST00000002829 PLEKHD1A6NEE1 506 aa18.39■□□□□ 0.53
SEMA3F-201ENST00000002829 LAS1LQ9Y4W2 734 aaKnown RBP18.38■□□□□ 0.53
SEMA3F-201ENST00000002829 UNC13AQ9UPW8 1703 aa18.38■□□□□ 0.53
SEMA3F-201ENST00000002829 MSH5O43196 834 aa18.37■□□□□ 0.53
SEMA3F-201ENST00000002829 CC2D1BQ5T0F9 858 aaKnown RBP18.36■□□□□ 0.53
SEMA3F-201ENST00000002829 ARXQ96QS3 562 aa18.36■□□□□ 0.53
SEMA3F-201ENST00000002829 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.36■□□□□ 0.53
SEMA3F-201ENST00000002829 NCAPD3P42695 1498 aa18.36■□□□□ 0.53
SEMA3F-201ENST00000002829 LRRC9Q6ZRR7 1453 aa18.34■□□□□ 0.53
SEMA3F-201ENST00000002829 ANP32AP39687 249 aaKnown RBP18.34■□□□□ 0.53
SEMA3F-201ENST00000002829 DAXXQ9UER7 740 aaPredicted RBP18.33■□□□□ 0.53
SEMA3F-201ENST00000002829 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
SEMA3F-201ENST00000002829 TOP2BQ02880 1626 aa18.32■□□□□ 0.52
SEMA3F-201ENST00000002829 CFTRP13569 1480 aa18.31■□□□□ 0.52
SEMA3F-201ENST00000002829 HNRNPMP52272 730 aaKnown RBP eCLIP18.31■□□□□ 0.52
SEMA3F-201ENST00000002829 RRBP1Q9P2E9 1410 aaKnown RBP18.31■□□□□ 0.52
SEMA3F-201ENST00000002829 ZBTB47Q9UFB7 747 aaPredicted RBP18.29■□□□□ 0.52
SEMA3F-201ENST00000002829 WDR97A6NE52 1622 aa18.29■□□□□ 0.52
SEMA3F-201ENST00000002829 CCER2I3L3R5 266 aa18.29■□□□□ 0.52
SEMA3F-201ENST00000002829 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.52
SEMA3F-201ENST00000002829 FMN1Q68DA7 1419 aa18.27■□□□□ 0.52
SEMA3F-201ENST00000002829 CCDC18Q5T9S5 1454 aa18.27■□□□□ 0.51
SEMA3F-201ENST00000002829 WASHC2AQ641Q2 1341 aa18.26■□□□□ 0.51
SEMA3F-201ENST00000002829 TNNT2P45379 298 aaPredicted RBP18.24■□□□□ 0.51
SEMA3F-201ENST00000002829 FGD6Q6ZV73 1430 aa18.23■□□□□ 0.51
SEMA3F-201ENST00000002829 TIMELESSQ9UNS1 1208 aa18.23■□□□□ 0.51
SEMA3F-201ENST00000002829 C11orf95C9JLR9 678 aaPredicted RBP18.23■□□□□ 0.51
SEMA3F-201ENST00000002829 NBPF8Q3BBV2 869 aa18.22■□□□□ 0.51
SEMA3F-201ENST00000002829 NEUROD2Q15784 382 aa18.21■□□□□ 0.51
SEMA3F-201ENST00000002829 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
SEMA3F-201ENST00000002829 NOP58Q9Y2X3 529 aaKnown RBP18.2■□□□□ 0.5
SEMA3F-201ENST00000002829 PRKRIP1Q9H875 184 aaPredicted RBP18.2■□□□□ 0.5
SEMA3F-201ENST00000002829 NUP155O75694 1391 aa18.19■□□□□ 0.5
SEMA3F-201ENST00000002829 ST20-MTHFSA0A0A6YYL1 179 aa18.18■□□□□ 0.5
SEMA3F-201ENST00000002829 ANO8Q9HCE9 1232 aaPredicted RBP18.18■□□□□ 0.5
SEMA3F-201ENST00000002829 CANXP27824 592 aaKnown RBP18.18■□□□□ 0.5
SEMA3F-201ENST00000002829 PPP4R2Q9NY27 417 aa18.18■□□□□ 0.5
SEMA3F-201ENST00000002829 PAK3O75914 559 aaPredicted RBP18.17■□□□□ 0.5
SEMA3F-201ENST00000002829 ERICH3Q5RHP9 1530 aa18.16■□□□□ 0.5
SEMA3F-201ENST00000002829 ERCC6Q03468 1493 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms