RNA–Protein interactions for RNA: ENSMUST00000163821.1

Shtn1-202, Transcript of Shootin-1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Shtn1, Length 3,767 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1-202ENSMUST00000163821 Slc4a3P16283 1227 aa17.18■□□□□ 0.34
Shtn1-202ENSMUST00000163821 Bcl11aQ9QYE3 773 aa17.17■□□□□ 0.34
Shtn1-202ENSMUST00000163821 Amer1Q7TS75 1132 aa17.16■□□□□ 0.34
Shtn1-202ENSMUST00000163821 Wwc2Q6NXJ0 1187 aa17.15■□□□□ 0.34
Shtn1-202ENSMUST00000163821 Wdr43Q6ZQL4 677 aaKnown RBP17.15■□□□□ 0.34
Shtn1-202ENSMUST00000163821 Cc2d2aQ8CFW7 1633 aa17.13■□□□□ 0.33
Shtn1-202ENSMUST00000163821 Ifnlr1Q8CGK5 535 aa17.09■□□□□ 0.33
Shtn1-202ENSMUST00000163821 Znf710Q3U288 666 aa17.07■□□□□ 0.32
Shtn1-202ENSMUST00000163821 Ubl4bQ9CQ84 188 aa17.07■□□□□ 0.32
Shtn1-202ENSMUST00000163821 Ccer2J3QPU5 274 aa17.03■□□□□ 0.32
Shtn1-202ENSMUST00000163821 Ncapd3Q6ZQK0 1506 aa17.02■□□□□ 0.32
Shtn1-202ENSMUST00000163821 Baz1bQ9Z277 1479 aa17.02■□□□□ 0.31
Shtn1-202ENSMUST00000163821 4933416C03RikQ3V063 378 aa17.02■□□□□ 0.31
Shtn1-202ENSMUST00000163821 Gm13697A2AK42 830 aa17.01■□□□□ 0.31
Shtn1-202ENSMUST00000163821 Supt16hQ920B9 1047 aa17.01■□□□□ 0.31
Shtn1-202ENSMUST00000163821 Fkbp15Q6P9Q6 1216 aaKnown RBP17.01■□□□□ 0.31
Shtn1-202ENSMUST00000163821 Rad21Q61550 635 aaKnown RBP17■□□□□ 0.31
Shtn1-202ENSMUST00000163821 Rgl3Q3UYI5 709 aa16.99■□□□□ 0.31
Shtn1-202ENSMUST00000163821 Prdm10Q3UTQ7 1184 aa16.97■□□□□ 0.31
Shtn1-202ENSMUST00000163821 Rtl5Q5DTT4 599 aa16.95■□□□□ 0.3
Shtn1-202ENSMUST00000163821 PtprkP35822 1457 aa16.95■□□□□ 0.3
Shtn1-202ENSMUST00000163821 Cttnbp2B9EJA2 1648 aa16.94■□□□□ 0.3
Shtn1-202ENSMUST00000163821 Top2aQ01320 1528 aaKnown RBP16.94■□□□□ 0.3
Shtn1-202ENSMUST00000163821 NeflP08551 543 aa16.93■□□□□ 0.3
Shtn1-202ENSMUST00000163821 Arap1Q4LDD4 1452 aa16.93■□□□□ 0.3
Shtn1-202ENSMUST00000163821 Grwd1Q810D6 446 aaKnown RBP16.93■□□□□ 0.3
Shtn1-202ENSMUST00000163821 Exoc6Q8R313 802 aa16.93■□□□□ 0.3
Shtn1-202ENSMUST00000163821 Aebp1Q640N1 1128 aa16.9■□□□□ 0.3
Shtn1-202ENSMUST00000163821 DaxxO35613 739 aa16.9■□□□□ 0.3
Shtn1-202ENSMUST00000163821 Ofd1Q80Z25 1017 aa16.9■□□□□ 0.3
Shtn1-202ENSMUST00000163821 BicraF8VPZ9 1578 aa16.88■□□□□ 0.29
Shtn1-202ENSMUST00000163821 Ccdc18Q640L5 1455 aa16.88■□□□□ 0.29
Shtn1-202ENSMUST00000163821 Arhgap35Q91YM2 1499 aa16.88■□□□□ 0.29
Shtn1-202ENSMUST00000163821 ArxO35085 564 aa16.88■□□□□ 0.29
Shtn1-202ENSMUST00000163821 Top2bQ64511 1612 aa16.88■□□□□ 0.29
Shtn1-202ENSMUST00000163821 Smarca4Q3TKT4 1613 aaKnown RBP16.87■□□□□ 0.29
Shtn1-202ENSMUST00000163821 Rpap1Q80TE0 1409 aa16.87■□□□□ 0.29
Shtn1-202ENSMUST00000163821 Anp32bQ9EST5 272 aaKnown RBP16.84■□□□□ 0.29
Shtn1-202ENSMUST00000163821 PrkcshO08795 521 aa16.82■□□□□ 0.28
Shtn1-202ENSMUST00000163821 Cabp1Q9JLK7 227 aa16.82■□□□□ 0.28
Shtn1-202ENSMUST00000163821 Pak3Q61036 559 aa16.81■□□□□ 0.28
Shtn1-202ENSMUST00000163821 Mphosph9A6H5Y1 991 aa16.81■□□□□ 0.28
Shtn1-202ENSMUST00000163821 Pkd2O35245 966 aa16.8■□□□□ 0.28
Shtn1-202ENSMUST00000163821 Os9Q8K2C7 672 aa16.8■□□□□ 0.28
Shtn1-202ENSMUST00000163821 Smg6P61406 1418 aaKnown RBP16.78■□□□□ 0.28
Shtn1-202ENSMUST00000163821 Naip1Q9QWK5 1403 aa16.77■□□□□ 0.27
Shtn1-202ENSMUST00000163821 Mia2Q91ZV0 1396 aa16.76■□□□□ 0.27
Shtn1-202ENSMUST00000163821 AqrQ8CFQ3 1481 aaKnown RBP16.76■□□□□ 0.27
Shtn1-202ENSMUST00000163821 Erich6D3Z6S9 713 aa16.75■□□□□ 0.27
Shtn1-202ENSMUST00000163821 Zfp644E9QA22 1323 aa16.74■□□□□ 0.27
Shtn1-202ENSMUST00000163821 Kcnh8P59111 1102 aa16.73■□□□□ 0.27
Shtn1-202ENSMUST00000163821 Apbb1Q9QXJ1 710 aa16.73■□□□□ 0.27
Shtn1-202ENSMUST00000163821 Slc4a2P13808 1237 aaKnown RBP16.71■□□□□ 0.27
Shtn1-202ENSMUST00000163821 Dbr1Q923B1 550 aa16.71■□□□□ 0.27
Shtn1-202ENSMUST00000163821 Iqgap2Q3UQ44 1575 aa16.7■□□□□ 0.26
Shtn1-202ENSMUST00000163821 Card11Q8CIS0 1159 aa16.69■□□□□ 0.26
Shtn1-202ENSMUST00000163821 B4galnt3Q6L8S8 986 aa16.69■□□□□ 0.26
Shtn1-202ENSMUST00000163821 CntlnA2AM05 1397 aa16.69■□□□□ 0.26
Shtn1-202ENSMUST00000163821 Rundc1Q0VDN7 615 aa16.68■□□□□ 0.26
Shtn1-202ENSMUST00000163821 Fyco1Q8VDC1 1437 aa16.68■□□□□ 0.26
Shtn1-202ENSMUST00000163821 Rangap1P46061 589 aaKnown RBP16.67■□□□□ 0.26
Shtn1-202ENSMUST00000163821 Arhgef5E9Q7D5 1581 aa16.67■□□□□ 0.26
Shtn1-202ENSMUST00000163821 Ccnb3Q810T2 1396 aa16.66■□□□□ 0.26
Shtn1-202ENSMUST00000163821 Polr3glQ8R0C0 218 aa16.64■□□□□ 0.25
Shtn1-202ENSMUST00000163821 Trak1Q6PD31 939 aa16.63■□□□□ 0.25
Shtn1-202ENSMUST00000163821 ChgaP26339 463 aaKnown RBP16.63■□□□□ 0.25
Shtn1-202ENSMUST00000163821 Atad2bE9Q166 1460 aaKnown RBP16.62■□□□□ 0.25
Shtn1-202ENSMUST00000163821 Arhgap27A2AB59 869 aa16.62■□□□□ 0.25
Shtn1-202ENSMUST00000163821 Dhx29Q6PGC1 1365 aaKnown RBP16.61■□□□□ 0.25
Shtn1-202ENSMUST00000163821 Cux2P70298 1426 aa16.61■□□□□ 0.25
Shtn1-202ENSMUST00000163821 Kif27Q7M6Z4 1394 aa16.6■□□□□ 0.25
Shtn1-202ENSMUST00000163821 Ccdc27Q3V036 639 aa16.59■□□□□ 0.25
Shtn1-202ENSMUST00000163821 Pds5bQ4VA53 1446 aaKnown RBP16.59■□□□□ 0.25
Shtn1-202ENSMUST00000163821 Gm13695A2AK44 830 aa16.59■□□□□ 0.25
Shtn1-202ENSMUST00000163821 Shroom4Q1W617 1475 aa16.59■□□□□ 0.25
Shtn1-202ENSMUST00000163821 Usp47Q8BY87 1376 aa16.58■□□□□ 0.24
Shtn1-202ENSMUST00000163821 CanxP35564 591 aaKnown RBP16.58■□□□□ 0.24
Shtn1-202ENSMUST00000163821 Carmil1Q6EDY6 1374 aa16.56■□□□□ 0.24
Shtn1-202ENSMUST00000163821 Hsp90aa1P07901 733 aaKnown RBP16.55■□□□□ 0.24
Shtn1-202ENSMUST00000163821 Neurod2Q62414 383 aa16.55■□□□□ 0.24
Shtn1-202ENSMUST00000163821 Ercc6F8VPZ5 1481 aa16.54■□□□□ 0.24
Shtn1-202ENSMUST00000163821 Kdm2aP59997 1161 aa16.54■□□□□ 0.24
Shtn1-202ENSMUST00000163821 Tcerg1Q8CGF7 1100 aaKnown RBP16.53■□□□□ 0.24
Shtn1-202ENSMUST00000163821 Nlrp6Q91WS2 869 aa16.53■□□□□ 0.24
Shtn1-202ENSMUST00000163821 Tiam1Q60610 1591 aa16.52■□□□□ 0.24
Shtn1-202ENSMUST00000163821 Fhad1A6PWD2 1420 aa16.52■□□□□ 0.23
Shtn1-202ENSMUST00000163821 Trim26Q99PN3 545 aa16.51■□□□□ 0.23
Shtn1-202ENSMUST00000163821 3425401B19RikD3Z1D3 1412 aa16.51■□□□□ 0.23
Shtn1-202ENSMUST00000163821 Washc2Q6PGL7 1334 aa16.5■□□□□ 0.23
Shtn1-202ENSMUST00000163821 Mtus2Q3UHD3 1353 aa16.5■□□□□ 0.23
Shtn1-202ENSMUST00000163821 Ecm2Q5FW85 670 aa16.5■□□□□ 0.23
Shtn1-202ENSMUST00000163821 Cwc22Q8C5N3 908 aaKnown RBP16.5■□□□□ 0.23
Shtn1-202ENSMUST00000163821 NrkQ9R0G8 1455 aa16.48■□□□□ 0.23
Shtn1-202ENSMUST00000163821 Upf2A2AT37 1269 aaKnown RBP16.47■□□□□ 0.23
Shtn1-202ENSMUST00000163821 Mroh2bQ7M6Y6 1581 aa16.47■□□□□ 0.23
Shtn1-202ENSMUST00000163821 LrpprcQ6PB66 1392 aaKnown RBP16.46■□□□□ 0.23
Shtn1-202ENSMUST00000163821 Rrp7aQ9D1C9 280 aaKnown RBP16.46■□□□□ 0.23
Shtn1-202ENSMUST00000163821 Trim30dE9PWL0 497 aa16.46■□□□□ 0.23
Shtn1-202ENSMUST00000163821 Armcx1Q9CX83 456 aa16.46■□□□□ 0.22
Shtn1-202ENSMUST00000163821 4930567H17RikQ3V0K5 233 aa16.45■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms