RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 UacaQ8CGB3 1411 aa20.85■□□□□ 0.93
Vcan-205ENSMUST00000159337 Stra8P70278 393 aa20.83■□□□□ 0.93
Vcan-205ENSMUST00000159337 Naip1Q9QWK5 1403 aa20.83■□□□□ 0.92
Vcan-205ENSMUST00000159337 Lamc3Q9R0B6 1581 aa20.82■□□□□ 0.92
Vcan-205ENSMUST00000159337 Camsap1A2AHC3 1581 aa20.8■□□□□ 0.92
Vcan-205ENSMUST00000159337 Ankrd26Q811D2 1581 aa20.77■□□□□ 0.92
Vcan-205ENSMUST00000159337 Anp32aO35381 247 aa20.76■□□□□ 0.91
Vcan-205ENSMUST00000159337 AqrQ8CFQ3 1481 aaKnown RBP20.74■□□□□ 0.91
Vcan-205ENSMUST00000159337 Slx4Q6P1D7 1565 aa20.74■□□□□ 0.91
Vcan-205ENSMUST00000159337 Pcf11G3X9Z4 1553 aa20.73■□□□□ 0.91
Vcan-205ENSMUST00000159337 DiexfQ8BTT6 772 aaKnown RBP20.73■□□□□ 0.91
Vcan-205ENSMUST00000159337 Ankrd36D3Z4K0 1415 aa20.73■□□□□ 0.91
Vcan-205ENSMUST00000159337 BlmO88700 1416 aa20.7■□□□□ 0.91
Vcan-205ENSMUST00000159337 Mroh2bQ7M6Y6 1581 aa20.7■□□□□ 0.9
Vcan-205ENSMUST00000159337 Gm13697A2AK42 830 aa20.68■□□□□ 0.9
Vcan-205ENSMUST00000159337 Bcl11aQ9QYE3 773 aa20.68■□□□□ 0.9
Vcan-205ENSMUST00000159337 NclP09405 707 aaKnown RBP20.67■□□□□ 0.9
Vcan-205ENSMUST00000159337 Lmo7E9PYF4 1699 aaKnown RBP20.67■□□□□ 0.9
Vcan-205ENSMUST00000159337 Camsap2Q8C1B1 1461 aa20.66■□□□□ 0.9
Vcan-205ENSMUST00000159337 Fhad1A6PWD2 1420 aa20.66■□□□□ 0.9
Vcan-205ENSMUST00000159337 Wdr62Q3U3T8 1523 aa20.65■□□□□ 0.9
Vcan-205ENSMUST00000159337 Frmpd1A2AKB4 1549 aa20.64■□□□□ 0.89
Vcan-205ENSMUST00000159337 Pds5bQ4VA53 1446 aaKnown RBP20.62■□□□□ 0.89
Vcan-205ENSMUST00000159337 Grin2bQ01097 1482 aa20.62■□□□□ 0.89
Vcan-205ENSMUST00000159337 3425401B19RikD3Z1D3 1412 aa20.61■□□□□ 0.89
Vcan-205ENSMUST00000159337 Peg3Q3URU2 1571 aa20.6■□□□□ 0.89
Vcan-205ENSMUST00000159337 Ccer2J3QPU5 274 aa20.59■□□□□ 0.89
Vcan-205ENSMUST00000159337 Mia2Q91ZV0 1396 aa20.59■□□□□ 0.89
Vcan-205ENSMUST00000159337 Vps8Q0P5W1 1427 aa20.58■□□□□ 0.89
Vcan-205ENSMUST00000159337 Rtl5Q5DTT4 599 aa20.58■□□□□ 0.88
Vcan-205ENSMUST00000159337 Dhx29Q6PGC1 1365 aaKnown RBP20.57■□□□□ 0.88
Vcan-205ENSMUST00000159337 Calr4Q3TQS0 420 aa20.57■□□□□ 0.88
Vcan-205ENSMUST00000159337 Kif15Q6P9L6 1387 aa20.56■□□□□ 0.88
Vcan-205ENSMUST00000159337 Fam50aQ9WV03 339 aaKnown RBP20.56■□□□□ 0.88
Vcan-205ENSMUST00000159337 Ncoa2Q61026 1462 aa20.56■□□□□ 0.88
Vcan-205ENSMUST00000159337 CntlnA2AM05 1397 aa20.55■□□□□ 0.88
Vcan-205ENSMUST00000159337 Crocc2F6XLV1 1638 aa20.55■□□□□ 0.88
Vcan-205ENSMUST00000159337 Smg6P61406 1418 aaKnown RBP20.52■□□□□ 0.88
Vcan-205ENSMUST00000159337 Fyco1Q8VDC1 1437 aa20.52■□□□□ 0.88
Vcan-205ENSMUST00000159337 Hspa5P20029 655 aaKnown RBP20.52■□□□□ 0.88
Vcan-205ENSMUST00000159337 Efcab5A0JP43 1406 aa20.52■□□□□ 0.88
Vcan-205ENSMUST00000159337 Unc13aQ4KUS2 1712 aa20.51■□□□□ 0.87
Vcan-205ENSMUST00000159337 Nolc1E9Q5C9 702 aaKnown RBP20.51■□□□□ 0.87
Vcan-205ENSMUST00000159337 Il27Q8K3I6 234 aa20.5■□□□□ 0.87
Vcan-205ENSMUST00000159337 Cux1P53564 1515 aa20.47■□□□□ 0.87
Vcan-205ENSMUST00000159337 Naip2Q9QUK4 1447 aa20.47■□□□□ 0.87
Vcan-205ENSMUST00000159337 Cul7Q8VE73 1689 aa20.46■□□□□ 0.87
Vcan-205ENSMUST00000159337 Naip5Q9R016 1403 aa20.45■□□□□ 0.86
Vcan-205ENSMUST00000159337 Carmil1Q6EDY6 1374 aa20.42■□□□□ 0.86
Vcan-205ENSMUST00000159337 Washc2Q6PGL7 1334 aa20.42■□□□□ 0.86
Vcan-205ENSMUST00000159337 Urb2E9Q7L1 1524 aaKnown RBP20.41■□□□□ 0.86
Vcan-205ENSMUST00000159337 Fhod3Q76LL6 1578 aa20.38■□□□□ 0.85
Vcan-205ENSMUST00000159337 Supt16hQ920B9 1047 aa20.38■□□□□ 0.85
Vcan-205ENSMUST00000159337 Pprc1Q6NZN1 1644 aa20.38■□□□□ 0.85
Vcan-205ENSMUST00000159337 Gm7298A0A0N4SVU1 1476 aa20.38■□□□□ 0.85
Vcan-205ENSMUST00000159337 Lmod2Q3UHZ5 550 aa20.37■□□□□ 0.85
Vcan-205ENSMUST00000159337 Pelp1Q9DBD5 1123 aaKnown RBP20.36■□□□□ 0.85
Vcan-205ENSMUST00000159337 Gm1043A0A140LJC2 1431 aa20.36■□□□□ 0.85
Vcan-205ENSMUST00000159337 Dennd4bQ3U1Y4 1499 aa20.35■□□□□ 0.85
Vcan-205ENSMUST00000159337 Thoc2B1AZI6 1594 aaKnown RBP20.33■□□□□ 0.85
Vcan-205ENSMUST00000159337 A2mQ6GQT1 1474 aa20.32■□□□□ 0.84
Vcan-205ENSMUST00000159337 Sin3aQ60520 1274 aaKnown RBP20.31■□□□□ 0.84
Vcan-205ENSMUST00000159337 Ercc6F8VPZ5 1481 aa20.29■□□□□ 0.84
Vcan-205ENSMUST00000159337 Wdr43Q6ZQL4 677 aaKnown RBP20.27■□□□□ 0.83
Vcan-205ENSMUST00000159337 Setbp1Q9Z180 1582 aa20.23■□□□□ 0.83
Vcan-205ENSMUST00000159337 Polr1aO35134 1717 aaKnown RBP20.21■□□□□ 0.83
Vcan-205ENSMUST00000159337 Ppp4r2Q0VGB7 417 aa20.21■□□□□ 0.83
Vcan-205ENSMUST00000159337 Ifnlr1Q8CGK5 535 aa20.21■□□□□ 0.83
Vcan-205ENSMUST00000159337 Lmtk2Q3TYD6 1471 aa20.21■□□□□ 0.83
Vcan-205ENSMUST00000159337 Aebp1Q640N1 1128 aa20.2■□□□□ 0.82
Vcan-205ENSMUST00000159337 Ncoa1P70365 1447 aa20.2■□□□□ 0.82
Vcan-205ENSMUST00000159337 Slc24a1Q91WD8 1130 aa20.2■□□□□ 0.82
Vcan-205ENSMUST00000159337 SynmQ70IV5 1561 aa20.18■□□□□ 0.82
Vcan-205ENSMUST00000159337 PogzQ8BZH4 1409 aaKnown RBP20.14■□□□□ 0.81
Vcan-205ENSMUST00000159337 Kif21aQ9QXL2 1672 aa20.13■□□□□ 0.81
Vcan-205ENSMUST00000159337 Duox2A2AQ99 1517 aa20.13■□□□□ 0.81
Vcan-205ENSMUST00000159337 Ccnb3Q810T2 1396 aa20.13■□□□□ 0.81
Vcan-205ENSMUST00000159337 Gm13695A2AK44 830 aa20.13■□□□□ 0.81
Vcan-205ENSMUST00000159337 Gcc2Q8CHG3 1679 aa20.11■□□□□ 0.81
Vcan-205ENSMUST00000159337 Mrs2Q5NCE8 434 aa20.11■□□□□ 0.81
Vcan-205ENSMUST00000159337 Slc4a2P13808 1237 aaKnown RBP20.1■□□□□ 0.81
Vcan-205ENSMUST00000159337 LrpprcQ6PB66 1392 aaKnown RBP20.1■□□□□ 0.81
Vcan-205ENSMUST00000159337 Cux2P70298 1426 aa20.09■□□□□ 0.81
Vcan-205ENSMUST00000159337 Liat1Q810M6 228 aa20.09■□□□□ 0.81
Vcan-205ENSMUST00000159337 Eif5bQ05D44 1216 aaKnown RBP20.09■□□□□ 0.81
Vcan-205ENSMUST00000159337 Rfx7F8VPJ6 1459 aa20.08■□□□□ 0.81
Vcan-205ENSMUST00000159337 Samd9lQ69Z37 1561 aa20.07■□□□□ 0.8
Vcan-205ENSMUST00000159337 Disp1Q3TDN0 1521 aa20.06■□□□□ 0.8
Vcan-205ENSMUST00000159337 Mphosph9A6H5Y1 991 aa20.06■□□□□ 0.8
Vcan-205ENSMUST00000159337 Ube2uB1AUC4 352 aa20.06■□□□□ 0.8
Vcan-205ENSMUST00000159337 Rprd2Q6NXI6 1469 aaKnown RBP20.05■□□□□ 0.8
Vcan-205ENSMUST00000159337 Chic2Q9D9G3 165 aa20.04■□□□□ 0.8
Vcan-205ENSMUST00000159337 Pak3Q61036 559 aa20.04■□□□□ 0.8
Vcan-205ENSMUST00000159337 Mug1P28665 1476 aa20.03■□□□□ 0.8
Vcan-205ENSMUST00000159337 PrkcshO08795 521 aa20.01■□□□□ 0.79
Vcan-205ENSMUST00000159337 Egfem1Q8C088 590 aa20.01■□□□□ 0.79
Vcan-205ENSMUST00000159337 PnisrA2AJT4 805 aaKnown RBP20■□□□□ 0.79
Vcan-205ENSMUST00000159337 Exoc6Q8R313 802 aa20■□□□□ 0.79
Vcan-205ENSMUST00000159337 Usp47Q8BY87 1376 aa19.99■□□□□ 0.79
Vcan-205ENSMUST00000159337 NrdcQ8BHG1 1161 aa19.99■□□□□ 0.79
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms