RNA–Protein interactions for RNA: ENSMUST00000115659.5

Pcdha9-201, Transcript of Protocadherin alpha-9, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha9, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9-201ENSMUST00000115659 NacadQ5SWP3 1504 aa20.68■□□□□ 0.9
Pcdha9-201ENSMUST00000115659 Rad21Q61550 635 aaKnown RBP20.65■□□□□ 0.9
Pcdha9-201ENSMUST00000115659 Baz1aO88379 1555 aa20.62■□□□□ 0.89
Pcdha9-201ENSMUST00000115659 Hsp90aa1P07901 733 aaKnown RBP20.58■□□□□ 0.89
Pcdha9-201ENSMUST00000115659 Eea1Q8BL66 1411 aa20.55■□□□□ 0.88
Pcdha9-201ENSMUST00000115659 Aebp2Q9Z248 504 aaKnown RBP20.52■□□□□ 0.88
Pcdha9-201ENSMUST00000115659 Rsf1E9PWW9 1441 aaKnown RBP20.51■□□□□ 0.87
Pcdha9-201ENSMUST00000115659 Rgl3Q3UYI5 709 aa20.46■□□□□ 0.87
Pcdha9-201ENSMUST00000115659 Cwc22Q8C5N3 908 aaKnown RBP20.46■□□□□ 0.87
Pcdha9-201ENSMUST00000115659 1700123L14RikQ3V2K7 440 aa20.46■□□□□ 0.87
Pcdha9-201ENSMUST00000115659 Ofd1Q80Z25 1017 aa20.46■□□□□ 0.87
Pcdha9-201ENSMUST00000115659 Kif15Q6P9L6 1387 aa20.42■□□□□ 0.86
Pcdha9-201ENSMUST00000115659 CanxP35564 591 aaKnown RBP20.42■□□□□ 0.86
Pcdha9-201ENSMUST00000115659 Rangap1P46061 589 aaKnown RBP20.4■□□□□ 0.86
Pcdha9-201ENSMUST00000115659 Fgd1P52734 960 aa20.39■□□□□ 0.85
Pcdha9-201ENSMUST00000115659 Ccdc18Q640L5 1455 aa20.38■□□□□ 0.85
Pcdha9-201ENSMUST00000115659 Hsp90ab1P11499 724 aaKnown RBP20.38■□□□□ 0.85
Pcdha9-201ENSMUST00000115659 Mia2Q91ZV0 1396 aa20.37■□□□□ 0.85
Pcdha9-201ENSMUST00000115659 Trim30dE9PWL0 497 aa20.35■□□□□ 0.85
Pcdha9-201ENSMUST00000115659 DekQ7TNV0 380 aaKnown RBP20.35■□□□□ 0.85
Pcdha9-201ENSMUST00000115659 Fam71e1A1L3C1 212 aa20.33■□□□□ 0.85
Pcdha9-201ENSMUST00000115659 Trim44Q9QXA7 346 aa20.33■□□□□ 0.84
Pcdha9-201ENSMUST00000115659 Card11Q8CIS0 1159 aa20.32■□□□□ 0.84
Pcdha9-201ENSMUST00000115659 Htatsf1Q8BGC0 757 aa20.29■□□□□ 0.84
Pcdha9-201ENSMUST00000115659 Ccdc27Q3V036 639 aa20.29■□□□□ 0.84
Pcdha9-201ENSMUST00000115659 IqubQ8CDK3 788 aa20.26■□□□□ 0.83
Pcdha9-201ENSMUST00000115659 Ppm1gQ61074 542 aa20.25■□□□□ 0.83
Pcdha9-201ENSMUST00000115659 CatipB9EKE5 520 aa20.25■□□□□ 0.83
Pcdha9-201ENSMUST00000115659 Mroh3A0A1D5RM54 893 aa20.22■□□□□ 0.83
Pcdha9-201ENSMUST00000115659 Grwd1Q810D6 446 aaKnown RBP20.22■□□□□ 0.83
Pcdha9-201ENSMUST00000115659 Trim26Q99PN3 545 aa20.22■□□□□ 0.83
Pcdha9-201ENSMUST00000115659 Mtus2Q3UHD3 1353 aa20.22■□□□□ 0.83
Pcdha9-201ENSMUST00000115659 Ercc6F8VPZ5 1481 aa20.22■□□□□ 0.83
Pcdha9-201ENSMUST00000115659 P3h3Q8CG70 732 aa20.21■□□□□ 0.83
Pcdha9-201ENSMUST00000115659 Srpk2O54781 681 aaKnown RBP20.21■□□□□ 0.83
Pcdha9-201ENSMUST00000115659 Chmp4bQ9D8B3 224 aaKnown RBP20.19■□□□□ 0.82
Pcdha9-201ENSMUST00000115659 Kdm2aP59997 1161 aa20.16■□□□□ 0.82
Pcdha9-201ENSMUST00000115659 Mbd3Q9Z2D8 285 aaKnown RBP20.16■□□□□ 0.82
Pcdha9-201ENSMUST00000115659 Safb2Q80YR5 991 aaKnown RBP20.14■□□□□ 0.82
Pcdha9-201ENSMUST00000115659 Gm20521D3Z5F7 333 aa20.14■□□□□ 0.81
Pcdha9-201ENSMUST00000115659 Vsig10D3YX43 558 aa20.13■□□□□ 0.81
Pcdha9-201ENSMUST00000115659 Mapk8ip3Q9ESN9 1337 aa20.12■□□□□ 0.81
Pcdha9-201ENSMUST00000115659 Arhgap27A2AB59 869 aa20.11■□□□□ 0.81
Pcdha9-201ENSMUST00000115659 Map7O88735 730 aa20.11■□□□□ 0.81
Pcdha9-201ENSMUST00000115659 Zfp777B9EKF4 885 aa20.1■□□□□ 0.81
Pcdha9-201ENSMUST00000115659 Plppr3Q7TPB0 716 aa20.1■□□□□ 0.81
Pcdha9-201ENSMUST00000115659 Exosc9Q9JHI7 438 aaKnown RBP20.09■□□□□ 0.81
Pcdha9-201ENSMUST00000115659 PtmaP26350 111 aa20.09■□□□□ 0.81
Pcdha9-201ENSMUST00000115659 NudcO35685 332 aaKnown RBP20.06■□□□□ 0.8
Pcdha9-201ENSMUST00000115659 Plcb2A3KGF7 1181 aa20.06■□□□□ 0.8
Pcdha9-201ENSMUST00000115659 Rrp7aQ9D1C9 280 aaKnown RBP20.06■□□□□ 0.8
Pcdha9-201ENSMUST00000115659 Apbb1Q9QXJ1 710 aa20.04■□□□□ 0.8
Pcdha9-201ENSMUST00000115659 Kdm5dQ62240 1548 aa20.04■□□□□ 0.8
Pcdha9-201ENSMUST00000115659 Neurod2Q62414 383 aa20.04■□□□□ 0.8
Pcdha9-201ENSMUST00000115659 Cep162Q6ZQ06 1403 aa20.04■□□□□ 0.8
Pcdha9-201ENSMUST00000115659 Hspa5P20029 655 aaKnown RBP20.03■□□□□ 0.8
Pcdha9-201ENSMUST00000115659 Lmod3E9QA62 571 aa20.02■□□□□ 0.8
Pcdha9-201ENSMUST00000115659 Ythdc1E9Q5K9 736 aaKnown RBP20.01■□□□□ 0.79
Pcdha9-201ENSMUST00000115659 Tcerg1Q8CGF7 1100 aaKnown RBP20.01■□□□□ 0.79
Pcdha9-201ENSMUST00000115659 Iqcf3Q9D498 203 aa20.01■□□□□ 0.79
Pcdha9-201ENSMUST00000115659 Fmn1Q05860 1466 aa20.01■□□□□ 0.79
Pcdha9-201ENSMUST00000115659 Rwdd1Q9CQK7 243 aa19.99■□□□□ 0.79
Pcdha9-201ENSMUST00000115659 Wwc2Q6NXJ0 1187 aa19.95■□□□□ 0.78
Pcdha9-201ENSMUST00000115659 Ccdc88bQ4QRL3 1481 aa19.94■□□□□ 0.78
Pcdha9-201ENSMUST00000115659 KnstrnQ9D9Z1 312 aaKnown RBP19.94■□□□□ 0.78
Pcdha9-201ENSMUST00000115659 Stag3O70576 1240 aa19.94■□□□□ 0.78
Pcdha9-201ENSMUST00000115659 Kif27Q7M6Z4 1394 aa19.94■□□□□ 0.78
Pcdha9-201ENSMUST00000115659 Pkd2O35245 966 aa19.93■□□□□ 0.78
Pcdha9-201ENSMUST00000115659 Fyco1Q8VDC1 1437 aa19.93■□□□□ 0.78
Pcdha9-201ENSMUST00000115659 Arid4bA2CG63 1314 aaKnown RBP19.93■□□□□ 0.78
Pcdha9-201ENSMUST00000115659 SafbD3YXK2 937 aaKnown RBP19.92■□□□□ 0.78
Pcdha9-201ENSMUST00000115659 Fhad1A6PWD2 1420 aa19.91■□□□□ 0.78
Pcdha9-201ENSMUST00000115659 Dbr1Q923B1 550 aa19.9■□□□□ 0.78
Pcdha9-201ENSMUST00000115659 Gm6268A2A3U9 297 aa19.89■□□□□ 0.77
Pcdha9-201ENSMUST00000115659 Map4P27546 1125 aaKnown RBP19.88■□□□□ 0.77
Pcdha9-201ENSMUST00000115659 Irx3P81067 507 aa19.88■□□□□ 0.77
Pcdha9-201ENSMUST00000115659 Rundc1Q0VDN7 615 aa19.88■□□□□ 0.77
Pcdha9-201ENSMUST00000115659 Stk24Q99KH8 431 aa19.88■□□□□ 0.77
Pcdha9-201ENSMUST00000115659 Adam1bQ8R534 806 aa19.86■□□□□ 0.77
Pcdha9-201ENSMUST00000115659 B4galnt3Q6L8S8 986 aa19.86■□□□□ 0.77
Pcdha9-201ENSMUST00000115659 Casc1Q6TDU8 730 aa19.86■□□□□ 0.77
Pcdha9-201ENSMUST00000115659 HnrnpuQ8VEK3 800 aaKnown RBP19.85■□□□□ 0.77
Pcdha9-201ENSMUST00000115659 Arhgap35Q91YM2 1499 aa19.85■□□□□ 0.77
Pcdha9-201ENSMUST00000115659 CntlnA2AM05 1397 aa19.85■□□□□ 0.77
Pcdha9-201ENSMUST00000115659 Zscan21Q07231 555 aa19.84■□□□□ 0.77
Pcdha9-201ENSMUST00000115659 Aebp1Q640N1 1128 aa19.84■□□□□ 0.77
Pcdha9-201ENSMUST00000115659 Irx6Q9ER75 438 aa19.84■□□□□ 0.77
Pcdha9-201ENSMUST00000115659 Supt16hQ920B9 1047 aa19.84■□□□□ 0.77
Pcdha9-201ENSMUST00000115659 Chmp5Q9D7S9 219 aa19.84■□□□□ 0.77
Pcdha9-201ENSMUST00000115659 Pds5bQ4VA53 1446 aaKnown RBP19.83■□□□□ 0.76
Pcdha9-201ENSMUST00000115659 PtmsQ9D0J8 101 aaKnown RBP19.83■□□□□ 0.76
Pcdha9-201ENSMUST00000115659 Baz1bQ9Z277 1479 aa19.82■□□□□ 0.76
Pcdha9-201ENSMUST00000115659 Exoc6Q8R313 802 aa19.82■□□□□ 0.76
Pcdha9-201ENSMUST00000115659 Tmf1B9EKI3 1091 aa19.81■□□□□ 0.76
Pcdha9-201ENSMUST00000115659 Mak16Q8BGS0 296 aaKnown RBP19.81■□□□□ 0.76
Pcdha9-201ENSMUST00000115659 EspnQ9ET47 871 aa19.81■□□□□ 0.76
Pcdha9-201ENSMUST00000115659 MccE9PWI3 1003 aa19.8■□□□□ 0.76
Pcdha9-201ENSMUST00000115659 Mphosph9A6H5Y1 991 aa19.79■□□□□ 0.76
Pcdha9-201ENSMUST00000115659 Dnai1Q8C0M8 701 aa19.79■□□□□ 0.76
Pcdha9-201ENSMUST00000115659 AU015836B2RUM3 263 aa19.79■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 8.4 ms