RNA–Protein interactions for RNA: ENSMUST00000111760.2

Nckap1-202, Transcript of Nck-associated protein 1, mousemouse

TSL 1 (best) BASIC

Gene Nckap1, Length 4,597 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1-202ENSMUST00000111760 Hdac5Q9Z2V6 1113 aa28.09■■■□□ 2.09
Nckap1-202ENSMUST00000111760 Mrs2Q5NCE8 434 aa28.09■■■□□ 2.09
Nckap1-202ENSMUST00000111760 Calr4Q3TQS0 420 aa28.08■■■□□ 2.08
Nckap1-202ENSMUST00000111760 Cecr2E9Q2Z1 1453 aa28.04■■■□□ 2.08
Nckap1-202ENSMUST00000111760 Ppp4r2Q0VGB7 417 aa28.01■■■□□ 2.08
Nckap1-202ENSMUST00000111760 ArxO35085 564 aa28.01■■■□□ 2.07
Nckap1-202ENSMUST00000111760 Crybg2B7ZCC2 1516 aa28.01■■■□□ 2.07
Nckap1-202ENSMUST00000111760 Pds5bQ4VA53 1446 aaKnown RBP28.01■■■□□ 2.07
Nckap1-202ENSMUST00000111760 Clstn2Q9ER65 966 aa28■■■□□ 2.07
Nckap1-202ENSMUST00000111760 ScribQ80U72 1612 aa28■■■□□ 2.07
Nckap1-202ENSMUST00000111760 Rgl3Q3UYI5 709 aa27.99■■■□□ 2.07
Nckap1-202ENSMUST00000111760 Arhgap27A2AB59 869 aa27.99■■■□□ 2.07
Nckap1-202ENSMUST00000111760 Cep162Q6ZQ06 1403 aa27.99■■■□□ 2.07
Nckap1-202ENSMUST00000111760 CftrP26361 1476 aa27.96■■■□□ 2.07
Nckap1-202ENSMUST00000111760 Fmn1Q05860 1466 aa27.96■■■□□ 2.07
Nckap1-202ENSMUST00000111760 DiexfQ8BTT6 772 aaKnown RBP27.94■■■□□ 2.06
Nckap1-202ENSMUST00000111760 Gm13695A2AK44 830 aa27.94■■■□□ 2.06
Nckap1-202ENSMUST00000111760 Plppr3Q7TPB0 716 aa27.93■■■□□ 2.06
Nckap1-202ENSMUST00000111760 Rad21Q61550 635 aaKnown RBP27.9■■■□□ 2.06
Nckap1-202ENSMUST00000111760 Smarca2Q6DIC0 1577 aa27.83■■■□□ 2.05
Nckap1-202ENSMUST00000111760 Rangap1P46061 589 aaKnown RBP27.8■■■□□ 2.04
Nckap1-202ENSMUST00000111760 Wdr43Q6ZQL4 677 aaKnown RBP27.79■■■□□ 2.04
Nckap1-202ENSMUST00000111760 Grwd1Q810D6 446 aaKnown RBP27.77■■■□□ 2.04
Nckap1-202ENSMUST00000111760 1700123L14RikQ3V2K7 440 aa27.72■■■□□ 2.03
Nckap1-202ENSMUST00000111760 Hspa5P20029 655 aaKnown RBP27.71■■■□□ 2.03
Nckap1-202ENSMUST00000111760 Synj1Q8CHC4 1574 aa27.67■■■□□ 2.02
Nckap1-202ENSMUST00000111760 Aebp1Q640N1 1128 aa27.65■■■□□ 2.02
Nckap1-202ENSMUST00000111760 Upf2A2AT37 1269 aaKnown RBP27.64■■■□□ 2.02
Nckap1-202ENSMUST00000111760 Mtus2Q3UHD3 1353 aa27.64■■■□□ 2.01
Nckap1-202ENSMUST00000111760 Mia2Q91ZV0 1396 aa27.63■■■□□ 2.01
Nckap1-202ENSMUST00000111760 Rrp7aQ9D1C9 280 aaKnown RBP27.62■■■□□ 2.01
Nckap1-202ENSMUST00000111760 Kdm2aP59997 1161 aa27.61■■■□□ 2.01
Nckap1-202ENSMUST00000111760 Kif27Q7M6Z4 1394 aa27.58■■■□□ 2.01
Nckap1-202ENSMUST00000111760 P3h3Q8CG70 732 aa27.58■■■□□ 2.01
Nckap1-202ENSMUST00000111760 Card11Q8CIS0 1159 aa27.56■■■□□ 2
Nckap1-202ENSMUST00000111760 Cux2P70298 1426 aa27.56■■■□□ 2
Nckap1-202ENSMUST00000111760 Rapgef2Q8CHG7 1496 aa27.54■■■□□ 2
Nckap1-202ENSMUST00000111760 Mroh3A0A1D5RM54 893 aa27.54■■■□□ 2
Nckap1-202ENSMUST00000111760 Atad2bE9Q166 1460 aaKnown RBP27.5■■□□□ 1.99
Nckap1-202ENSMUST00000111760 Baz1bQ9Z277 1479 aa27.46■■□□□ 1.99
Nckap1-202ENSMUST00000111760 Ofd1Q80Z25 1017 aa27.45■■□□□ 1.98
Nckap1-202ENSMUST00000111760 Fam71e1A1L3C1 212 aa27.43■■□□□ 1.98
Nckap1-202ENSMUST00000111760 Cwc22Q8C5N3 908 aaKnown RBP27.43■■□□□ 1.98
Nckap1-202ENSMUST00000111760 Pkd2O35245 966 aa27.41■■□□□ 1.98
Nckap1-202ENSMUST00000111760 Cabp1Q9JLK7 227 aa27.4■■□□□ 1.98
Nckap1-202ENSMUST00000111760 Phldb1Q6PDH0 1371 aaKnown RBP27.38■■□□□ 1.97
Nckap1-202ENSMUST00000111760 Rpap1Q80TE0 1409 aa27.37■■□□□ 1.97
Nckap1-202ENSMUST00000111760 Smarca4Q3TKT4 1613 aaKnown RBP27.37■■□□□ 1.97
Nckap1-202ENSMUST00000111760 Trim26Q99PN3 545 aa27.36■■□□□ 1.97
Nckap1-202ENSMUST00000111760 Fyco1Q8VDC1 1437 aa27.36■■□□□ 1.97
Nckap1-202ENSMUST00000111760 CntlnA2AM05 1397 aa27.35■■□□□ 1.97
Nckap1-202ENSMUST00000111760 Safb2Q80YR5 991 aaKnown RBP27.35■■□□□ 1.97
Nckap1-202ENSMUST00000111760 Srpk2O54781 681 aaKnown RBP27.34■■□□□ 1.97
Nckap1-202ENSMUST00000111760 Sin3aQ60520 1274 aaKnown RBP27.34■■□□□ 1.97
Nckap1-202ENSMUST00000111760 Gm20521D3Z5F7 333 aa27.34■■□□□ 1.97
Nckap1-202ENSMUST00000111760 Map4P27546 1125 aaKnown RBP27.32■■□□□ 1.96
Nckap1-202ENSMUST00000111760 Wwc2Q6NXJ0 1187 aa27.32■■□□□ 1.96
Nckap1-202ENSMUST00000111760 Stk24Q99KH8 431 aa27.28■■□□□ 1.96
Nckap1-202ENSMUST00000111760 Carmil1Q6EDY6 1374 aa27.27■■□□□ 1.96
Nckap1-202ENSMUST00000111760 CanxP35564 591 aaKnown RBP27.25■■□□□ 1.95
Nckap1-202ENSMUST00000111760 Mphosph9A6H5Y1 991 aa27.25■■□□□ 1.95
Nckap1-202ENSMUST00000111760 Trak1Q6PD31 939 aa27.25■■□□□ 1.95
Nckap1-202ENSMUST00000111760 SafbD3YXK2 937 aaKnown RBP27.24■■□□□ 1.95
Nckap1-202ENSMUST00000111760 Trim30dE9PWL0 497 aa27.23■■□□□ 1.95
Nckap1-202ENSMUST00000111760 IqubQ8CDK3 788 aa27.22■■□□□ 1.95
Nckap1-202ENSMUST00000111760 LrpprcQ6PB66 1392 aaKnown RBP27.22■■□□□ 1.95
Nckap1-202ENSMUST00000111760 AknaQ80VW7 1404 aa27.21■■□□□ 1.95
Nckap1-202ENSMUST00000111760 Cttnbp2B9EJA2 1648 aa27.21■■□□□ 1.95
Nckap1-202ENSMUST00000111760 Arhgap35Q91YM2 1499 aa27.2■■□□□ 1.94
Nckap1-202ENSMUST00000111760 Apbb1Q9QXJ1 710 aa27.19■■□□□ 1.94
Nckap1-202ENSMUST00000111760 Rundc1Q0VDN7 615 aa27.17■■□□□ 1.94
Nckap1-202ENSMUST00000111760 Arid3cA6PWV5 409 aa27.17■■□□□ 1.94
Nckap1-202ENSMUST00000111760 Exosc9Q9JHI7 438 aaKnown RBP27.14■■□□□ 1.94
Nckap1-202ENSMUST00000111760 Hsp90aa1P07901 733 aaKnown RBP27.14■■□□□ 1.94
Nckap1-202ENSMUST00000111760 Vsig10D3YX43 558 aa27.14■■□□□ 1.94
Nckap1-202ENSMUST00000111760 Neurod2Q62414 383 aa27.12■■□□□ 1.93
Nckap1-202ENSMUST00000111760 DekQ7TNV0 380 aaKnown RBP27.11■■□□□ 1.93
Nckap1-202ENSMUST00000111760 Hsp90ab1P11499 724 aaKnown RBP27.09■■□□□ 1.93
Nckap1-202ENSMUST00000111760 Fgd1P52734 960 aa27.08■■□□□ 1.93
Nckap1-202ENSMUST00000111760 Dhx29Q6PGC1 1365 aaKnown RBP27.07■■□□□ 1.92
Nckap1-202ENSMUST00000111760 Ccnb3Q810T2 1396 aa27.05■■□□□ 1.92
Nckap1-202ENSMUST00000111760 Iqgap2Q3UQ44 1575 aa27.05■■□□□ 1.92
Nckap1-202ENSMUST00000111760 Stag3O70576 1240 aa27.04■■□□□ 1.92
Nckap1-202ENSMUST00000111760 Cnga1P29974 684 aa27.04■■□□□ 1.92
Nckap1-202ENSMUST00000111760 Ifit1bl1D3Z6F0 470 aa27.03■■□□□ 1.92
Nckap1-202ENSMUST00000111760 Exoc6Q8R313 802 aa27.02■■□□□ 1.92
Nckap1-202ENSMUST00000111760 Arid4bA2CG63 1314 aaKnown RBP27■■□□□ 1.91
Nckap1-202ENSMUST00000111760 Slc4a3P16283 1227 aa26.95■■□□□ 1.9
Nckap1-202ENSMUST00000111760 Dbr1Q923B1 550 aa26.93■■□□□ 1.9
Nckap1-202ENSMUST00000111760 Lemd3Q9WU40 921 aa26.92■■□□□ 1.9
Nckap1-202ENSMUST00000111760 Ccdc9Q8VC31 543 aaKnown RBP26.91■■□□□ 1.9
Nckap1-202ENSMUST00000111760 Irx6Q9ER75 438 aa26.91■■□□□ 1.9
Nckap1-202ENSMUST00000111760 Ythdc1E9Q5K9 736 aaKnown RBP26.89■■□□□ 1.9
Nckap1-202ENSMUST00000111760 Plekhh2Q8C115 1491 aa26.87■■□□□ 1.89
Nckap1-202ENSMUST00000111760 Nup155Q99P88 1391 aaKnown RBP26.87■■□□□ 1.89
Nckap1-202ENSMUST00000111760 Mapk8ip3Q9ESN9 1337 aa26.87■■□□□ 1.89
Nckap1-202ENSMUST00000111760 Sart1Q9Z315 806 aaKnown RBP26.85■■□□□ 1.89
Nckap1-202ENSMUST00000111760 Dhx57Q6P5D3 1388 aaKnown RBP26.85■■□□□ 1.89
Nckap1-202ENSMUST00000111760 B4galnt3Q6L8S8 986 aa26.84■■□□□ 1.89
Nckap1-202ENSMUST00000111760 WrnO09053 1401 aa26.83■■□□□ 1.89
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms