RNA–Protein interactions for RNA: ENSMUST00000109444.2

Col4a3bp-202, Transcript of Collagen type IV alpha-3-binding protein, mousemouse

TSL 1 (best) BASIC

Gene Col4a3bp, Length 5,285 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bp-202ENSMUST00000109444 Atp1b4Q99ME6 356 aa23.68■■□□□ 1.38
Col4a3bp-202ENSMUST00000109444 Rsf1E9PWW9 1441 aaKnown RBP23.65■■□□□ 1.38
Col4a3bp-202ENSMUST00000109444 Fam71e1A1L3C1 212 aa23.64■■□□□ 1.38
Col4a3bp-202ENSMUST00000109444 Rad21Q61550 635 aaKnown RBP23.61■■□□□ 1.37
Col4a3bp-202ENSMUST00000109444 Cwc22Q8C5N3 908 aaKnown RBP23.61■■□□□ 1.37
Col4a3bp-202ENSMUST00000109444 Mia2Q91ZV0 1396 aa23.61■■□□□ 1.37
Col4a3bp-202ENSMUST00000109444 ArxO35085 564 aa23.59■■□□□ 1.37
Col4a3bp-202ENSMUST00000109444 Ccdc27Q3V036 639 aa23.57■■□□□ 1.36
Col4a3bp-202ENSMUST00000109444 Ofd1Q80Z25 1017 aa23.56■■□□□ 1.36
Col4a3bp-202ENSMUST00000109444 Prdm10Q3UTQ7 1184 aa23.55■■□□□ 1.36
Col4a3bp-202ENSMUST00000109444 Fkbp15Q6P9Q6 1216 aaKnown RBP23.53■■□□□ 1.36
Col4a3bp-202ENSMUST00000109444 Ccdc18Q640L5 1455 aa23.51■■□□□ 1.35
Col4a3bp-202ENSMUST00000109444 CanxP35564 591 aaKnown RBP23.51■■□□□ 1.35
Col4a3bp-202ENSMUST00000109444 Ifnlr1Q8CGK5 535 aa23.48■■□□□ 1.35
Col4a3bp-202ENSMUST00000109444 Kif15Q6P9L6 1387 aa23.47■■□□□ 1.35
Col4a3bp-202ENSMUST00000109444 Htatsf1Q8BGC0 757 aa23.44■■□□□ 1.34
Col4a3bp-202ENSMUST00000109444 Hsp90ab1P11499 724 aaKnown RBP23.43■■□□□ 1.34
Col4a3bp-202ENSMUST00000109444 Rgl3Q3UYI5 709 aa23.43■■□□□ 1.34
Col4a3bp-202ENSMUST00000109444 Kdm5dQ62240 1548 aa23.42■■□□□ 1.34
Col4a3bp-202ENSMUST00000109444 Gm13695A2AK44 830 aa23.42■■□□□ 1.34
Col4a3bp-202ENSMUST00000109444 Ppm1gQ61074 542 aa23.4■■□□□ 1.34
Col4a3bp-202ENSMUST00000109444 Trim44Q9QXA7 346 aa23.39■■□□□ 1.33
Col4a3bp-202ENSMUST00000109444 Card11Q8CIS0 1159 aa23.36■■□□□ 1.33
Col4a3bp-202ENSMUST00000109444 Trim30dE9PWL0 497 aa23.36■■□□□ 1.33
Col4a3bp-202ENSMUST00000109444 Mbd3Q9Z2D8 285 aaKnown RBP23.35■■□□□ 1.33
Col4a3bp-202ENSMUST00000109444 Fmn1Q05860 1466 aa23.31■■□□□ 1.32
Col4a3bp-202ENSMUST00000109444 Cep162Q6ZQ06 1403 aa23.3■■□□□ 1.32
Col4a3bp-202ENSMUST00000109444 Ercc6F8VPZ5 1481 aa23.3■■□□□ 1.32
Col4a3bp-202ENSMUST00000109444 DekQ7TNV0 380 aaKnown RBP23.3■■□□□ 1.32
Col4a3bp-202ENSMUST00000109444 Fgd1P52734 960 aa23.25■■□□□ 1.31
Col4a3bp-202ENSMUST00000109444 Mtus2Q3UHD3 1353 aa23.25■■□□□ 1.31
Col4a3bp-202ENSMUST00000109444 P3h3Q8CG70 732 aa23.23■■□□□ 1.31
Col4a3bp-202ENSMUST00000109444 Crybg2B7ZCC2 1516 aa23.22■■□□□ 1.31
Col4a3bp-202ENSMUST00000109444 Ccdc88bQ4QRL3 1481 aa23.22■■□□□ 1.31
Col4a3bp-202ENSMUST00000109444 Chmp4bQ9D8B3 224 aaKnown RBP23.22■■□□□ 1.31
Col4a3bp-202ENSMUST00000109444 Tcerg1Q8CGF7 1100 aaKnown RBP23.19■■□□□ 1.3
Col4a3bp-202ENSMUST00000109444 IqubQ8CDK3 788 aa23.15■■□□□ 1.3
Col4a3bp-202ENSMUST00000109444 Map7O88735 730 aa23.15■■□□□ 1.3
Col4a3bp-202ENSMUST00000109444 Grwd1Q810D6 446 aaKnown RBP23.14■■□□□ 1.3
Col4a3bp-202ENSMUST00000109444 Rangap1P46061 589 aaKnown RBP23.13■■□□□ 1.29
Col4a3bp-202ENSMUST00000109444 Mroh3A0A1D5RM54 893 aa23.13■■□□□ 1.29
Col4a3bp-202ENSMUST00000109444 Bcl11aQ9QYE3 773 aa23.12■■□□□ 1.29
Col4a3bp-202ENSMUST00000109444 Ythdc1E9Q5K9 736 aaKnown RBP23.11■■□□□ 1.29
Col4a3bp-202ENSMUST00000109444 Irx3P81067 507 aa23.11■■□□□ 1.29
Col4a3bp-202ENSMUST00000109444 CatipB9EKE5 520 aa23.1■■□□□ 1.29
Col4a3bp-202ENSMUST00000109444 Fyco1Q8VDC1 1437 aa23.1■■□□□ 1.29
Col4a3bp-202ENSMUST00000109444 Hspa5P20029 655 aaKnown RBP23.1■■□□□ 1.29
Col4a3bp-202ENSMUST00000109444 SafbD3YXK2 937 aaKnown RBP23.1■■□□□ 1.29
Col4a3bp-202ENSMUST00000109444 Srpk2O54781 681 aaKnown RBP23.1■■□□□ 1.29
Col4a3bp-202ENSMUST00000109444 Arid4bA2CG63 1314 aaKnown RBP23.07■■□□□ 1.28
Col4a3bp-202ENSMUST00000109444 Baz1bQ9Z277 1479 aa23.07■■□□□ 1.28
Col4a3bp-202ENSMUST00000109444 Arhgap35Q91YM2 1499 aa23.06■■□□□ 1.28
Col4a3bp-202ENSMUST00000109444 PtmaP26350 111 aa23.06■■□□□ 1.28
Col4a3bp-202ENSMUST00000109444 Trim26Q99PN3 545 aa23.05■■□□□ 1.28
Col4a3bp-202ENSMUST00000109444 Rwdd1Q9CQK7 243 aa23.04■■□□□ 1.28
Col4a3bp-202ENSMUST00000109444 Plcb2A3KGF7 1181 aa23.03■■□□□ 1.28
Col4a3bp-202ENSMUST00000109444 Mapk8ip3Q9ESN9 1337 aa23.03■■□□□ 1.28
Col4a3bp-202ENSMUST00000109444 Gm20521D3Z5F7 333 aa23.03■■□□□ 1.28
Col4a3bp-202ENSMUST00000109444 NudcO35685 332 aaKnown RBP23.02■■□□□ 1.28
Col4a3bp-202ENSMUST00000109444 CntlnA2AM05 1397 aa23.02■■□□□ 1.28
Col4a3bp-202ENSMUST00000109444 Zfp777B9EKF4 885 aa23.02■■□□□ 1.27
Col4a3bp-202ENSMUST00000109444 Kdm2aP59997 1161 aa22.99■■□□□ 1.27
Col4a3bp-202ENSMUST00000109444 Wwc2Q6NXJ0 1187 aa22.98■■□□□ 1.27
Col4a3bp-202ENSMUST00000109444 Vsig10D3YX43 558 aa22.98■■□□□ 1.27
Col4a3bp-202ENSMUST00000109444 Arhgap27A2AB59 869 aa22.97■■□□□ 1.27
Col4a3bp-202ENSMUST00000109444 Ipo9Q91YE6 1041 aa22.97■■□□□ 1.27
Col4a3bp-202ENSMUST00000109444 Pkd2O35245 966 aa22.96■■□□□ 1.27
Col4a3bp-202ENSMUST00000109444 Kif27Q7M6Z4 1394 aa22.95■■□□□ 1.26
Col4a3bp-202ENSMUST00000109444 Supt16hQ920B9 1047 aa22.95■■□□□ 1.26
Col4a3bp-202ENSMUST00000109444 Fhad1A6PWD2 1420 aa22.94■■□□□ 1.26
Col4a3bp-202ENSMUST00000109444 Apbb1Q9QXJ1 710 aa22.94■■□□□ 1.26
Col4a3bp-202ENSMUST00000109444 Neurod2Q62414 383 aa22.94■■□□□ 1.26
Col4a3bp-202ENSMUST00000109444 KnstrnQ9D9Z1 312 aaKnown RBP22.94■■□□□ 1.26
Col4a3bp-202ENSMUST00000109444 AU015836B2RUM3 263 aa22.93■■□□□ 1.26
Col4a3bp-202ENSMUST00000109444 Rrp7aQ9D1C9 280 aaKnown RBP22.93■■□□□ 1.26
Col4a3bp-202ENSMUST00000109444 Pds5bQ4VA53 1446 aaKnown RBP22.92■■□□□ 1.26
Col4a3bp-202ENSMUST00000109444 Exosc9Q9JHI7 438 aaKnown RBP22.92■■□□□ 1.26
Col4a3bp-202ENSMUST00000109444 EspnQ9ET47 871 aa22.9■■□□□ 1.26
Col4a3bp-202ENSMUST00000109444 Adam1bQ8R534 806 aa22.89■■□□□ 1.26
Col4a3bp-202ENSMUST00000109444 Zscan21Q07231 555 aa22.89■■□□□ 1.25
Col4a3bp-202ENSMUST00000109444 Exoc6Q8R313 802 aa22.89■■□□□ 1.25
Col4a3bp-202ENSMUST00000109444 Rundc1Q0VDN7 615 aa22.88■■□□□ 1.25
Col4a3bp-202ENSMUST00000109444 Iqcf3Q9D498 203 aa22.88■■□□□ 1.25
Col4a3bp-202ENSMUST00000109444 Dnai1Q8C0M8 701 aa22.88■■□□□ 1.25
Col4a3bp-202ENSMUST00000109444 Lmod3E9QA62 571 aa22.88■■□□□ 1.25
Col4a3bp-202ENSMUST00000109444 PtmsQ9D0J8 101 aaKnown RBP22.88■■□□□ 1.25
Col4a3bp-202ENSMUST00000109444 Mak16Q8BGS0 296 aaKnown RBP22.87■■□□□ 1.25
Col4a3bp-202ENSMUST00000109444 Aebp1Q640N1 1128 aa22.87■■□□□ 1.25
Col4a3bp-202ENSMUST00000109444 Smarca2Q6DIC0 1577 aa22.87■■□□□ 1.25
Col4a3bp-202ENSMUST00000109444 Sycp2Q9CUU3 1500 aa22.86■■□□□ 1.25
Col4a3bp-202ENSMUST00000109444 Chmp5Q9D7S9 219 aa22.85■■□□□ 1.25
Col4a3bp-202ENSMUST00000109444 CftrP26361 1476 aa22.85■■□□□ 1.25
Col4a3bp-202ENSMUST00000109444 Dbr1Q923B1 550 aa22.85■■□□□ 1.25
Col4a3bp-202ENSMUST00000109444 Mphosph9A6H5Y1 991 aa22.84■■□□□ 1.25
Col4a3bp-202ENSMUST00000109444 B4galnt3Q6L8S8 986 aa22.83■■□□□ 1.25
Col4a3bp-202ENSMUST00000109444 Map4P27546 1125 aaKnown RBP22.82■■□□□ 1.24
Col4a3bp-202ENSMUST00000109444 Tmf1B9EKI3 1091 aa22.81■■□□□ 1.24
Col4a3bp-202ENSMUST00000109444 HnrnpuQ8VEK3 800 aaKnown RBP22.8■■□□□ 1.24
Col4a3bp-202ENSMUST00000109444 Rock2P70336 1388 aa22.8■■□□□ 1.24
Col4a3bp-202ENSMUST00000109444 Casc1Q6TDU8 730 aa22.78■■□□□ 1.24
Retrieved 100 of 22,080 RNA–protein pairs in 14.6 ms